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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0857
ILE 4790.0074
PHE 4800.0075
ILE 4810.0061
SER 4820.0034
ASP 4830.0035
ASP 4840.0039
LYS 4850.0037
ASP 4860.0033
SER 4870.0049
LEU 4880.0052
LYS 4890.0054
CYS 4900.0062
PRO 4910.0053
CYS 4920.0053
ASP 4930.0051
PRO 4940.0088
GLU 4950.0088
MET 4960.0076
VAL 4970.0067
SER 4980.0145
GLN 4990.0209
SER 5000.0358
THR 5010.0324
CYS 5020.0195
ARG 5030.0104
PHE 5040.0052
PHE 5050.0052
VAL 5060.0074
CYS 5070.0078
LYS 5080.0092
CYS 5090.0078
VAL 5100.0090
GLU 5110.0084
ARG 5120.0115
SER 20.0145
VAL 30.0135
LEU 40.0102
SER 50.0126
GLN 60.0102
SER 70.0116
PRO 80.0120
ALA 90.0121
ILE 100.0136
LEU 110.0130
SER 120.0141
ALA 130.0149
SER 140.0167
PRO 150.0176
GLY 160.0210
GLU 170.0194
LYS 180.0163
VAL 190.0136
THR 200.0095
MET 210.0089
THR 220.0090
CYS 230.0095
ARG 240.0137
ALA 250.0155
ARG 260.0197
SER 270.0202
SER 290.0191
VAL 300.0153
SER 310.0150
TYR 320.0103
MET 330.0073
HIS 340.0046
TRP 350.0026
TYR 360.0028
GLN 370.0046
GLN 380.0051
LYS 390.0068
SER 400.0058
GLY 410.0052
SER 420.0040
SER 430.0022
PRO 440.0021
LYS 450.0039
PRO 460.0032
TRP 470.0049
ILE 480.0039
HIS 490.0065
ALA 500.0088
THR 510.0075
SER 520.0068
ASN 530.0070
LEU 540.0067
ALA 550.0090
SER 560.0128
GLY 570.0145
VAL 580.0111
PRO 590.0133
ALA 600.0124
ARG 610.0127
PHE 620.0084
SER 630.0050
GLY 640.0038
SER 650.0068
GLY 660.0106
SER 670.0145
GLY 680.0174
THR 690.0165
SER 700.0134
TYR 710.0089
SER 720.0061
LEU 730.0040
THR 740.0084
ILE 750.0115
SER 760.0143
ARG 770.0179
VAL 780.0158
GLU 790.0162
ALA 800.0135
GLU 810.0129
ASP 820.0126
ALA 830.0124
ALA 840.0102
THR 850.0087
TYR 860.0058
TYR 870.0042
CYS 880.0040
GLN 890.0050
GLN 900.0070
TRP 910.0072
SER 920.0100
SER 930.0098
HIS 940.0073
PRO 950.0063
PRO 960.0053
THR 970.0055
PHE 980.0034
GLY 990.0052
SER 1000.0066
GLY 1010.0077
THR 1020.0093
LYS 1030.0110
LEU 1040.0130
GLU 1050.0125
ILE 1060.0126
LYS 1070.0085
ARG 1080.0063
ALA 1090.0121
ASP 1100.0211
ALA 1110.0236
ALA 1120.0274
PRO 1130.0147
THR 1140.0183
VAL 1150.0125
SER 1160.0092
ILE 1170.0079
PHE 1180.0088
PRO 1190.0085
PRO 1200.0096
SER 1210.0120
SER 1220.0181
GLU 1230.0148
GLN 1240.0124
LEU 1250.0195
THR 1260.0241
SER 1270.0223
GLY 1280.0236
GLY 1290.0181
ALA 1300.0148
SER 1310.0097
VAL 1320.0070
VAL 1330.0061
CYS 1340.0045
PHE 1350.0076
LEU 1360.0064
ASN 1370.0114
ASN 1380.0128
PHE 1390.0078
TYR 1400.0064
PRO 1410.0087
LYS 1420.0105
ASP 1430.0224
ILE 1440.0193
ASN 1450.0251
VAL 1460.0195
LYS 1470.0226
TRP 1480.0158
LYS 1490.0174
ILE 1500.0100
ASP 1510.0077
GLY 1520.0206
SER 1530.0263
GLU 1540.0281
ARG 1550.0273
GLN 1560.0260
ASN 1570.0313
GLY 1580.0183
VAL 1590.0111
LEU 1600.0073
ASN 1610.0094
SER 1620.0119
TRP 1630.0102
THR 1640.0145
ASP 1650.0154
GLN 1660.0139
ASP 1670.0155
SER 1680.0158
LYS 1690.0147
ASP 1700.0149
SER 1710.0110
THR 1720.0095
TYR 1730.0088
SER 1740.0093
MET 1750.0079
SER 1760.0072
SER 1770.0050
THR 1780.0067
LEU 1790.0087
THR 1800.0131
LEU 1810.0168
THR 1820.0249
LYS 1830.0254
ASP 1840.0279
GLU 1850.0222
TYR 1860.0171
GLU 1870.0207
ARG 1880.0197
HIS 1890.0094
ASN 1900.0084
SER 1910.0075
TYR 1920.0055
THR 1930.0121
CYS 1940.0121
GLU 1950.0230
ALA 1960.0236
THR 1970.0365
HIS 1980.0321
LYS 1990.0424
THR 2000.0486
SER 2010.0640
THR 2020.0857
SER 2030.0661
PRO 2040.0469
ILE 2050.0371
VAL 2060.0239
LYS 2070.0181
SER 2080.0150
PHE 2090.0145
ASN 2100.0141
ARG 2110.0154
ASN 2120.0228
GLU 2130.0208
CYS 2140.0193
GLU 10.0178
VAL 20.0122
GLN 30.0112
LEU 40.0063
VAL 50.0066
GLU 60.0042
SER 70.0061
GLY 80.0063
GLY 90.0061
GLY 100.0125
LEU 110.0163
VAL 120.0134
LYS 130.0169
PRO 140.0147
GLY 150.0066
GLY 160.0029
SER 170.0021
LEU 180.0030
LYS 190.0052
LEU 200.0037
SER 210.0054
CYS 220.0058
ALA 230.0095
ALA 240.0098
SER 250.0139
GLY 260.0154
PHE 270.0127
ILE 280.0119
PHE 290.0097
SER 300.0084
ASP 310.0058
TYR 320.0040
TYR 330.0015
MET 340.0023
TYR 350.0022
TRP 360.0026
VAL 370.0043
ARG 380.0055
GLN 390.0064
THR 400.0082
PRO 410.0097
GLU 420.0082
LYS 430.0049
ARG 440.0041
LEU 450.0033
GLU 460.0066
TRP 470.0057
VAL 480.0049
ALA 490.0052
THR 500.0041
ILE 510.0046
SER 520.0039
ASP 520.0044
GLY 530.0068
ASN 540.0089
SER 550.0078
TYR 560.0083
THR 570.0078
TYR 580.0081
TYR 590.0089
VAL 600.0102
ASP 610.0184
SER 620.0173
VAL 630.0134
LYS 640.0159
GLY 650.0165
ARG 660.0130
PHE 670.0094
THR 680.0100
ILE 690.0076
SER 700.0092
ARG 710.0095
ASP 720.0133
ASN 730.0131
ALA 740.0177
LYS 750.0170
ASN 760.0125
ASN 770.0102
LEU 780.0067
TYR 790.0062
LEU 800.0052
GLN 810.0075
MET 820.0059
SER 820.0073
SER 820.0089
LEU 820.0092
LYS 830.0154
SER 840.0189
GLU 850.0180
ASP 860.0131
THR 870.0138
ALA 880.0094
ILE 890.0072
TYR 900.0046
TYR 910.0029
CYS 920.0024
ALA 930.0028
ARG 940.0037
ASP 950.0055
GLY 960.0083
PRO 970.0093
THR 980.0095
ASP 990.0118
SER 1000.0104
SER 1000.0089
GLY 1000.0084
TYR 1000.0088
GLY 1000.0071
GLY 1000.0067
PHE 1000.0051
GLY 1010.0064
TYR 1020.0056
TRP 1030.0030
GLY 1040.0026
GLN 1050.0036
GLY 1060.0049
THR 1070.0055
LEU 1080.0090
VAL 1090.0095
THR 1100.0149
VAL 1110.0149
SER 1120.0250
GLU 1130.0315
ALA 1140.0363
LYS 1150.0372
THR 1160.0303
THR 1170.0291
PRO 1180.0240
PRO 1190.0174
SER 1200.0123
VAL 1210.0072
TYR 1220.0047
PRO 1230.0052
LEU 1240.0061
ALA 1250.0058
PRO 1260.0076
GLY 1270.0096
SER 1280.0144
ALA 1290.0141
ALA 1300.0124
GLN 1330.0213
THR 1340.0358
ASN 1350.0406
SER 1360.0452
MET 1370.0339
VAL 1380.0251
THR 1390.0135
LEU 1400.0089
GLY 1410.0077
CYS 1420.0039
LEU 1430.0057
VAL 1440.0087
LYS 1450.0100
GLY 1460.0174
TYR 1470.0218
PHE 1480.0261
PRO 1490.0239
GLU 1500.0194
PRO 1510.0190
VAL 1520.0158
THR 1530.0125
VAL 1540.0080
THR 1560.0055
TRP 1570.0029
ASN 1620.0071
SER 1630.0038
GLY 1640.0035
SER 1650.0086
LEU 1660.0116
SER 1670.0154
SER 1680.0217
GLY 1690.0214
VAL 1710.0170
HIS 1720.0168
THR 1730.0159
PHE 1740.0137
PRO 1750.0166
ALA 1760.0150
VAL 1770.0199
LEU 1780.0276
GLN 1790.0314
SER 1800.0416
ASP 1830.0361
LEU 1840.0287
TYR 1850.0218
THR 1860.0137
LEU 1870.0108
SER 1880.0082
SER 1890.0112
SER 1900.0119
VAL 1910.0126
THR 1920.0204
VAL 1930.0236
PRO 1940.0345
SER 1950.0358
SER 1960.0405
PRO 1980.0347
ARG 1990.0286
PRO 2000.0271
SER 2020.0376
GLU 2030.0341
THR 2040.0252
VAL 2050.0129
THR 2060.0080
CYS 2080.0029
ASN 2090.0071
VAL 2100.0105
ALA 2110.0159
HIS 2120.0192
PRO 2130.0219
ALA 2140.0260
SER 2150.0264
SER 2160.0243
THR 2170.0216
LYS 2180.0188
VAL 2190.0153
ASP 2200.0108
LYS 2210.0088
LYS 2220.0109
ILE 2230.0071
VAL 2260.0113
PRO 2270.0066
ARG 2280.0041
ASP 2320.0169
CYS 2330.0227

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.