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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 17  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0572
ILE 4790.0135
PHE 4800.0118
ILE 4810.0114
SER 4820.0124
ASP 4830.0122
ASP 4840.0120
LYS 4850.0105
ASP 4860.0122
SER 4870.0136
LEU 4880.0122
LYS 4890.0115
CYS 4900.0095
PRO 4910.0089
CYS 4920.0075
ASP 4930.0070
PRO 4940.0080
GLU 4950.0084
MET 4960.0087
VAL 4970.0165
SER 4980.0183
GLN 4990.0287
SER 5000.0335
THR 5010.0294
CYS 5020.0244
ARG 5030.0139
PHE 5040.0122
PHE 5050.0090
VAL 5060.0070
CYS 5070.0072
LYS 5080.0072
CYS 5090.0056
VAL 5100.0066
GLU 5110.0092
ARG 5120.0117
SER 20.0173
VAL 30.0208
LEU 40.0185
SER 50.0239
GLN 60.0215
SER 70.0262
PRO 80.0268
ALA 90.0270
ILE 100.0252
LEU 110.0215
SER 120.0212
ALA 130.0171
SER 140.0189
PRO 150.0143
GLY 160.0092
GLU 170.0105
LYS 180.0124
VAL 190.0162
THR 200.0187
MET 210.0187
THR 220.0224
CYS 230.0214
ARG 240.0277
ALA 250.0254
ARG 260.0302
SER 270.0291
SER 290.0247
VAL 300.0180
SER 310.0190
TYR 320.0115
MET 330.0091
HIS 340.0051
TRP 350.0039
TYR 360.0033
GLN 370.0056
GLN 380.0091
LYS 390.0118
SER 400.0126
GLY 410.0131
SER 420.0103
SER 430.0062
PRO 440.0066
LYS 450.0068
PRO 460.0051
TRP 470.0051
ILE 480.0069
HIS 490.0085
ALA 500.0126
THR 510.0145
SER 520.0168
ASN 530.0160
LEU 540.0145
ALA 550.0132
SER 560.0188
GLY 570.0182
VAL 580.0128
PRO 590.0131
ALA 600.0160
ARG 610.0108
PHE 620.0100
SER 630.0152
GLY 640.0170
SER 650.0226
GLY 660.0272
SER 670.0307
GLY 680.0318
THR 690.0309
SER 700.0305
TYR 710.0224
SER 720.0192
LEU 730.0140
THR 740.0147
ILE 750.0097
SER 760.0120
ARG 770.0054
VAL 780.0071
GLU 790.0108
ALA 800.0168
GLU 810.0153
ASP 820.0114
ALA 830.0146
ALA 840.0132
THR 850.0119
TYR 860.0073
TYR 870.0069
CYS 880.0065
GLN 890.0054
GLN 900.0045
TRP 910.0027
SER 920.0037
SER 930.0045
HIS 940.0074
PRO 950.0077
PRO 960.0054
THR 970.0073
PHE 980.0051
GLY 990.0088
SER 1000.0125
GLY 1010.0155
THR 1020.0163
LYS 1030.0168
LEU 1040.0154
GLU 1050.0186
ILE 1060.0188
LYS 1070.0240
ARG 1080.0272
ALA 1090.0320
ASP 1100.0318
ALA 1110.0287
ALA 1120.0256
PRO 1130.0116
THR 1140.0126
VAL 1150.0084
SER 1160.0068
ILE 1170.0060
PHE 1180.0045
PRO 1190.0042
PRO 1200.0066
SER 1210.0088
SER 1220.0125
GLU 1230.0146
GLN 1240.0130
LEU 1250.0130
THR 1260.0182
SER 1270.0215
GLY 1280.0179
GLY 1290.0155
ALA 1300.0103
SER 1310.0070
VAL 1320.0055
VAL 1330.0047
CYS 1340.0045
PHE 1350.0057
LEU 1360.0066
ASN 1370.0127
ASN 1380.0167
PHE 1390.0178
TYR 1400.0237
PRO 1410.0239
LYS 1420.0196
ASP 1430.0205
ILE 1440.0153
ASN 1450.0109
VAL 1460.0051
LYS 1470.0039
TRP 1480.0064
LYS 1490.0125
ILE 1500.0149
ASP 1510.0186
GLY 1520.0223
SER 1530.0189
GLU 1540.0192
ARG 1550.0137
GLN 1560.0133
ASN 1570.0133
GLY 1580.0081
VAL 1590.0046
LEU 1600.0037
ASN 1610.0041
SER 1620.0048
TRP 1630.0079
THR 1640.0099
ASP 1650.0133
GLN 1660.0163
ASP 1670.0167
SER 1680.0166
LYS 1690.0216
ASP 1700.0245
SER 1710.0219
THR 1720.0204
TYR 1730.0150
SER 1740.0118
MET 1750.0079
SER 1760.0045
SER 1770.0039
THR 1780.0037
LEU 1790.0070
THR 1800.0091
LEU 1810.0120
THR 1820.0182
LYS 1830.0144
ASP 1840.0167
GLU 1850.0172
TYR 1860.0129
GLU 1870.0124
ARG 1880.0173
HIS 1890.0170
ASN 1900.0155
SER 1910.0149
TYR 1920.0116
THR 1930.0115
CYS 1940.0074
GLU 1950.0053
ALA 1960.0073
THR 1970.0140
HIS 1980.0203
LYS 1990.0295
THR 2000.0330
SER 2010.0327
THR 2020.0384
SER 2030.0176
PRO 2040.0099
ILE 2050.0129
VAL 2060.0108
LYS 2070.0112
SER 2080.0121
PHE 2090.0117
ASN 2100.0120
ARG 2110.0094
ASN 2120.0048
GLU 2130.0053
CYS 2140.0132
GLU 10.0115
VAL 20.0063
GLN 30.0060
LEU 40.0018
VAL 50.0035
GLU 60.0044
SER 70.0091
GLY 80.0112
GLY 90.0110
GLY 100.0154
LEU 110.0211
VAL 120.0264
LYS 130.0351
PRO 140.0344
GLY 150.0318
GLY 160.0270
SER 170.0212
LEU 180.0169
LYS 190.0106
LEU 200.0086
SER 210.0068
CYS 220.0029
ALA 230.0039
ALA 240.0041
SER 250.0073
GLY 260.0085
PHE 270.0076
ILE 280.0089
PHE 290.0066
SER 300.0081
ASP 310.0082
TYR 320.0063
TYR 330.0061
MET 340.0042
TYR 350.0050
TRP 360.0055
VAL 370.0058
ARG 380.0061
GLN 390.0055
THR 400.0047
PRO 410.0032
GLU 420.0040
LYS 430.0048
ARG 440.0041
LEU 450.0037
GLU 460.0079
TRP 470.0073
VAL 480.0071
ALA 490.0079
THR 500.0072
ILE 510.0067
SER 520.0083
ASP 520.0091
GLY 530.0124
ASN 540.0135
SER 550.0099
TYR 560.0112
THR 570.0096
TYR 580.0105
TYR 590.0109
VAL 600.0127
ASP 610.0194
SER 620.0207
VAL 630.0159
LYS 640.0152
GLY 650.0122
ARG 660.0136
PHE 670.0102
THR 680.0064
ILE 690.0043
SER 700.0033
ARG 710.0028
ASP 720.0046
ASN 730.0076
ALA 740.0094
LYS 750.0085
ASN 760.0064
ASN 770.0036
LEU 780.0011
TYR 790.0041
LEU 800.0062
GLN 810.0078
MET 820.0126
SER 820.0173
SER 820.0224
LEU 820.0224
LYS 830.0262
SER 840.0275
GLU 850.0226
ASP 860.0169
THR 870.0153
ALA 880.0084
ILE 890.0059
TYR 900.0054
TYR 910.0043
CYS 920.0041
ALA 930.0037
ARG 940.0053
ASP 950.0052
GLY 960.0056
PRO 970.0090
THR 980.0097
ASP 990.0102
SER 1000.0078
SER 1000.0068
GLY 1000.0061
TYR 1000.0050
GLY 1000.0045
GLY 1000.0046
PHE 1000.0049
GLY 1010.0058
TYR 1020.0064
TRP 1030.0033
GLY 1040.0028
GLN 1050.0032
GLY 1060.0035
THR 1070.0055
LEU 1080.0065
VAL 1090.0107
THR 1100.0171
VAL 1110.0231
SER 1120.0320
GLU 1130.0412
ALA 1140.0354
LYS 1150.0337
THR 1160.0245
THR 1170.0244
PRO 1180.0205
PRO 1190.0118
SER 1200.0079
VAL 1210.0056
TYR 1220.0058
PRO 1230.0045
LEU 1240.0054
ALA 1250.0083
PRO 1260.0094
GLY 1270.0093
SER 1280.0150
ALA 1290.0216
ALA 1300.0180
GLN 1330.0442
THR 1340.0562
ASN 1350.0546
SER 1360.0572
MET 1370.0405
VAL 1380.0281
THR 1390.0090
LEU 1400.0047
GLY 1410.0022
CYS 1420.0033
LEU 1430.0040
VAL 1440.0041
LYS 1450.0026
GLY 1460.0088
TYR 1470.0118
PHE 1480.0147
PRO 1490.0110
GLU 1500.0032
PRO 1510.0048
VAL 1520.0071
THR 1530.0108
VAL 1540.0078
THR 1560.0076
TRP 1570.0035
ASN 1620.0034
SER 1630.0077
GLY 1640.0079
SER 1650.0042
LEU 1660.0032
SER 1670.0082
SER 1680.0094
GLY 1690.0100
VAL 1710.0088
HIS 1720.0076
THR 1730.0069
PHE 1740.0051
PRO 1750.0040
ALA 1760.0016
VAL 1770.0085
LEU 1780.0135
GLN 1790.0180
SER 1800.0257
ASP 1830.0237
LEU 1840.0165
TYR 1850.0086
THR 1860.0026
LEU 1870.0022
SER 1880.0041
SER 1890.0060
SER 1900.0031
VAL 1910.0017
THR 1920.0156
VAL 1930.0253
PRO 1940.0413
SER 1950.0461
SER 1960.0518
PRO 1980.0446
ARG 1990.0375
PRO 2000.0375
SER 2020.0502
GLU 2030.0445
THR 2040.0332
VAL 2050.0127
THR 2060.0099
CYS 2080.0041
ASN 2090.0074
VAL 2100.0086
ALA 2110.0158
HIS 2120.0141
PRO 2130.0179
ALA 2140.0172
SER 2150.0231
SER 2160.0251
THR 2170.0192
LYS 2180.0164
VAL 2190.0132
ASP 2200.0113
LYS 2210.0114
LYS 2220.0128
ILE 2230.0138
VAL 2260.0239
PRO 2270.0240
ARG 2280.0205
ASP 2320.0269
CYS 2330.0247

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.