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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0641
ILE 4790.0106
PHE 4800.0074
ILE 4810.0075
SER 4820.0102
ASP 4830.0099
ASP 4840.0121
LYS 4850.0099
ASP 4860.0119
SER 4870.0123
LEU 4880.0093
LYS 4890.0082
CYS 4900.0058
PRO 4910.0049
CYS 4920.0049
ASP 4930.0053
PRO 4940.0054
GLU 4950.0041
MET 4960.0043
VAL 4970.0062
SER 4980.0074
GLN 4990.0154
SER 5000.0182
THR 5010.0145
CYS 5020.0123
ARG 5030.0059
PHE 5040.0065
PHE 5050.0051
VAL 5060.0035
CYS 5070.0035
LYS 5080.0015
CYS 5090.0033
VAL 5100.0032
GLU 5110.0035
ARG 5120.0052
SER 20.0185
VAL 30.0207
LEU 40.0176
SER 50.0205
GLN 60.0162
SER 70.0177
PRO 80.0170
ALA 90.0178
ILE 100.0180
LEU 110.0121
SER 120.0123
ALA 130.0099
SER 140.0107
PRO 150.0092
GLY 160.0058
GLU 170.0038
LYS 180.0033
VAL 190.0061
THR 200.0091
MET 210.0106
THR 220.0142
CYS 230.0158
ARG 240.0226
ALA 250.0228
ARG 260.0287
SER 270.0285
SER 290.0239
VAL 300.0174
SER 310.0171
TYR 320.0091
MET 330.0065
HIS 340.0029
TRP 350.0021
TYR 360.0057
GLN 370.0087
GLN 380.0115
LYS 390.0158
SER 400.0189
GLY 410.0199
SER 420.0148
SER 430.0092
PRO 440.0096
LYS 450.0088
PRO 460.0060
TRP 470.0060
ILE 480.0036
HIS 490.0048
ALA 500.0085
THR 510.0096
SER 520.0114
ASN 530.0113
LEU 540.0114
ALA 550.0111
SER 560.0176
GLY 570.0189
VAL 580.0135
PRO 590.0134
ALA 600.0134
ARG 610.0084
PHE 620.0065
SER 630.0087
GLY 640.0096
SER 650.0155
GLY 660.0204
SER 670.0251
GLY 680.0276
THR 690.0264
SER 700.0241
TYR 710.0161
SER 720.0120
LEU 730.0066
THR 740.0055
ILE 750.0021
SER 760.0052
ARG 770.0021
VAL 780.0055
GLU 790.0098
ALA 800.0128
GLU 810.0140
ASP 820.0119
ALA 830.0139
ALA 840.0135
THR 850.0124
TYR 860.0086
TYR 870.0076
CYS 880.0060
GLN 890.0049
GLN 900.0052
TRP 910.0040
SER 920.0051
SER 930.0046
HIS 940.0036
PRO 950.0039
PRO 960.0045
THR 970.0071
PHE 980.0084
GLY 990.0108
SER 1000.0138
GLY 1010.0112
THR 1020.0118
LYS 1030.0137
LEU 1040.0118
GLU 1050.0133
ILE 1060.0131
LYS 1070.0127
ARG 1080.0137
ALA 1090.0145
ASP 1100.0149
ALA 1110.0116
ALA 1120.0118
PRO 1130.0123
THR 1140.0117
VAL 1150.0114
SER 1160.0099
ILE 1170.0069
PHE 1180.0061
PRO 1190.0055
PRO 1200.0074
SER 1210.0122
SER 1220.0150
GLU 1230.0171
GLN 1240.0145
LEU 1250.0084
THR 1260.0146
SER 1270.0210
GLY 1280.0201
GLY 1290.0186
ALA 1300.0094
SER 1310.0060
VAL 1320.0040
VAL 1330.0064
CYS 1340.0081
PHE 1350.0100
LEU 1360.0112
ASN 1370.0103
ASN 1380.0109
PHE 1390.0123
TYR 1400.0134
PRO 1410.0153
LYS 1420.0150
ASP 1430.0183
ILE 1440.0150
ASN 1450.0127
VAL 1460.0088
LYS 1470.0034
TRP 1480.0061
LYS 1490.0162
ILE 1500.0235
ASP 1510.0327
GLY 1520.0389
SER 1530.0304
GLU 1540.0303
ARG 1550.0189
GLN 1560.0193
ASN 1570.0201
GLY 1580.0143
VAL 1590.0099
LEU 1600.0139
ASN 1610.0106
SER 1620.0122
TRP 1630.0135
THR 1640.0108
ASP 1650.0124
GLN 1660.0133
ASP 1670.0137
SER 1680.0128
LYS 1690.0134
ASP 1700.0140
SER 1710.0138
THR 1720.0129
TYR 1730.0124
SER 1740.0114
MET 1750.0113
SER 1760.0114
SER 1770.0089
THR 1780.0077
LEU 1790.0069
THR 1800.0142
LEU 1810.0191
THR 1820.0293
LYS 1830.0226
ASP 1840.0327
GLU 1850.0317
TYR 1860.0230
GLU 1870.0271
ARG 1880.0376
HIS 1890.0340
ASN 1900.0328
SER 1910.0268
TYR 1920.0173
THR 1930.0145
CYS 1940.0083
GLU 1950.0098
ALA 1960.0128
THR 1970.0163
HIS 1980.0178
LYS 1990.0230
THR 2000.0222
SER 2010.0243
THR 2020.0334
SER 2030.0240
PRO 2040.0175
ILE 2050.0163
VAL 2060.0149
LYS 2070.0149
SER 2080.0156
PHE 2090.0206
ASN 2100.0243
ARG 2110.0213
ASN 2120.0192
GLU 2130.0136
CYS 2140.0152
GLU 10.0134
VAL 20.0091
GLN 30.0076
LEU 40.0049
VAL 50.0048
GLU 60.0036
SER 70.0060
GLY 80.0087
GLY 90.0091
GLY 100.0161
LEU 110.0136
VAL 120.0143
LYS 130.0136
PRO 140.0137
GLY 150.0233
GLY 160.0208
SER 170.0184
LEU 180.0154
LYS 190.0108
LEU 200.0080
SER 210.0067
CYS 220.0048
ALA 230.0069
ALA 240.0078
SER 250.0104
GLY 260.0115
PHE 270.0109
ILE 280.0118
PHE 290.0098
SER 300.0099
ASP 310.0094
TYR 320.0078
TYR 330.0067
MET 340.0045
TYR 350.0039
TRP 360.0033
VAL 370.0039
ARG 380.0040
GLN 390.0063
THR 400.0081
PRO 410.0099
GLU 420.0151
LYS 430.0125
ARG 440.0115
LEU 450.0086
GLU 460.0065
TRP 470.0055
VAL 480.0044
ALA 490.0044
THR 500.0045
ILE 510.0047
SER 520.0065
ASP 520.0088
GLY 530.0113
ASN 540.0107
SER 550.0075
TYR 560.0058
THR 570.0049
TYR 580.0052
TYR 590.0066
VAL 600.0087
ASP 610.0147
SER 620.0162
VAL 630.0138
LYS 640.0155
GLY 650.0168
ARG 660.0164
PHE 670.0114
THR 680.0090
ILE 690.0053
SER 700.0037
ARG 710.0055
ASP 720.0075
ASN 730.0097
ALA 740.0117
LYS 750.0120
ASN 760.0097
ASN 770.0075
LEU 780.0052
TYR 790.0060
LEU 800.0068
GLN 810.0099
MET 820.0147
SER 820.0190
SER 820.0204
LEU 820.0161
LYS 830.0155
SER 840.0116
GLU 850.0119
ASP 860.0105
THR 870.0067
ALA 880.0043
ILE 890.0017
TYR 900.0023
TYR 910.0031
CYS 920.0023
ALA 930.0037
ARG 940.0052
ASP 950.0043
GLY 960.0043
PRO 970.0056
THR 980.0049
ASP 990.0052
SER 1000.0045
SER 1000.0038
GLY 1000.0032
TYR 1000.0026
GLY 1000.0023
GLY 1000.0025
PHE 1000.0032
GLY 1010.0039
TYR 1020.0048
TRP 1030.0038
GLY 1040.0023
GLN 1050.0021
GLY 1060.0008
THR 1070.0030
LEU 1080.0059
VAL 1090.0087
THR 1100.0078
VAL 1110.0098
SER 1120.0045
GLU 1130.0109
ALA 1140.0223
LYS 1150.0395
THR 1160.0335
THR 1170.0387
PRO 1180.0389
PRO 1190.0256
SER 1200.0246
VAL 1210.0124
TYR 1220.0132
PRO 1230.0120
LEU 1240.0115
ALA 1250.0125
PRO 1260.0125
GLY 1270.0123
SER 1280.0172
ALA 1290.0120
ALA 1300.0191
GLN 1330.0288
THR 1340.0308
ASN 1350.0265
SER 1360.0254
MET 1370.0198
VAL 1380.0179
THR 1390.0108
LEU 1400.0104
GLY 1410.0091
CYS 1420.0078
LEU 1430.0097
VAL 1440.0094
LYS 1450.0120
GLY 1460.0198
TYR 1470.0176
PHE 1480.0154
PRO 1490.0108
GLU 1500.0143
PRO 1510.0252
VAL 1520.0227
THR 1530.0289
VAL 1540.0133
THR 1560.0147
TRP 1570.0087
ASN 1620.0115
SER 1630.0180
GLY 1640.0225
SER 1650.0214
LEU 1660.0167
SER 1670.0177
SER 1680.0190
GLY 1690.0144
VAL 1710.0058
HIS 1720.0062
THR 1730.0059
PHE 1740.0122
PRO 1750.0138
ALA 1760.0140
VAL 1770.0214
LEU 1780.0259
GLN 1790.0337
SER 1800.0456
ASP 1830.0309
LEU 1840.0235
TYR 1850.0148
THR 1860.0103
LEU 1870.0088
SER 1880.0085
SER 1890.0064
SER 1900.0077
VAL 1910.0077
THR 1920.0101
VAL 1930.0182
PRO 1940.0271
SER 1950.0341
SER 1960.0441
PRO 1980.0328
ARG 1990.0285
PRO 2000.0271
SER 2020.0349
GLU 2030.0261
THR 2040.0138
VAL 2050.0068
THR 2060.0049
CYS 2080.0073
ASN 2090.0175
VAL 2100.0210
ALA 2110.0370
HIS 2120.0352
PRO 2130.0509
ALA 2140.0464
SER 2150.0553
SER 2160.0641
THR 2170.0499
LYS 2180.0443
VAL 2190.0346
ASP 2200.0187
LYS 2210.0154
LYS 2220.0123
ILE 2230.0138
VAL 2260.0237
PRO 2270.0248
ARG 2280.0240
ASP 2320.0308
CYS 2330.0258

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.