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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0758
ILE 4790.0209
PHE 4800.0188
ILE 4810.0178
SER 4820.0138
ASP 4830.0119
ASP 4840.0120
LYS 4850.0121
ASP 4860.0127
SER 4870.0143
LEU 4880.0140
LYS 4890.0128
CYS 4900.0110
PRO 4910.0077
CYS 4920.0072
ASP 4930.0074
PRO 4940.0120
GLU 4950.0120
MET 4960.0109
VAL 4970.0195
SER 4980.0178
GLN 4990.0255
SER 5000.0354
THR 5010.0282
CYS 5020.0160
ARG 5030.0098
PHE 5040.0110
PHE 5050.0145
VAL 5060.0141
CYS 5070.0123
LYS 5080.0099
CYS 5090.0080
VAL 5100.0096
GLU 5110.0108
ARG 5120.0164
SER 20.0047
VAL 30.0068
LEU 40.0073
SER 50.0090
GLN 60.0098
SER 70.0117
PRO 80.0152
ALA 90.0166
ILE 100.0190
LEU 110.0175
SER 120.0177
ALA 130.0179
SER 140.0184
PRO 150.0189
GLY 160.0193
GLU 170.0171
LYS 180.0153
VAL 190.0133
THR 200.0118
MET 210.0108
THR 220.0095
CYS 230.0084
ARG 240.0086
ALA 250.0063
ARG 260.0065
SER 270.0051
SER 290.0064
VAL 300.0056
SER 310.0072
TYR 320.0048
MET 330.0038
HIS 340.0036
TRP 350.0052
TYR 360.0068
GLN 370.0084
GLN 380.0093
LYS 390.0117
SER 400.0122
GLY 410.0122
SER 420.0082
SER 430.0041
PRO 440.0053
LYS 450.0062
PRO 460.0049
TRP 470.0069
ILE 480.0040
HIS 490.0039
ALA 500.0048
THR 510.0046
SER 520.0046
ASN 530.0034
LEU 540.0046
ALA 550.0075
SER 560.0109
GLY 570.0141
VAL 580.0121
PRO 590.0142
ALA 600.0125
ARG 610.0138
PHE 620.0102
SER 630.0071
GLY 640.0059
SER 650.0075
GLY 660.0093
SER 670.0105
GLY 680.0098
THR 690.0085
SER 700.0099
TYR 710.0074
SER 720.0080
LEU 730.0078
THR 740.0110
ILE 750.0133
SER 760.0143
ARG 770.0177
VAL 780.0175
GLU 790.0191
ALA 800.0178
GLU 810.0179
ASP 820.0169
ALA 830.0163
ALA 840.0149
THR 850.0130
TYR 860.0094
TYR 870.0076
CYS 880.0061
GLN 890.0042
GLN 900.0034
TRP 910.0037
SER 920.0045
SER 930.0057
HIS 940.0065
PRO 950.0063
PRO 960.0044
THR 970.0048
PHE 980.0060
GLY 990.0073
SER 1000.0083
GLY 1010.0120
THR 1020.0132
LYS 1030.0161
LEU 1040.0178
GLU 1050.0180
ILE 1060.0175
LYS 1070.0183
ARG 1080.0156
ALA 1090.0173
ASP 1100.0280
ALA 1110.0207
ALA 1120.0224
PRO 1130.0077
THR 1140.0098
VAL 1150.0065
SER 1160.0081
ILE 1170.0082
PHE 1180.0084
PRO 1190.0048
PRO 1200.0023
SER 1210.0039
SER 1220.0121
GLU 1230.0098
GLN 1240.0076
LEU 1250.0160
THR 1260.0225
SER 1270.0233
GLY 1280.0256
GLY 1290.0189
ALA 1300.0127
SER 1310.0066
VAL 1320.0062
VAL 1330.0081
CYS 1340.0073
PHE 1350.0053
LEU 1360.0026
ASN 1370.0018
ASN 1380.0035
PHE 1390.0103
TYR 1400.0188
PRO 1410.0241
LYS 1420.0234
ASP 1430.0308
ILE 1440.0199
ASN 1450.0152
VAL 1460.0047
LYS 1470.0079
TRP 1480.0118
LYS 1490.0156
ILE 1500.0119
ASP 1510.0099
GLY 1520.0202
SER 1530.0234
GLU 1540.0258
ARG 1550.0226
GLN 1560.0231
ASN 1570.0276
GLY 1580.0192
VAL 1590.0127
LEU 1600.0073
ASN 1610.0071
SER 1620.0097
TRP 1630.0110
THR 1640.0122
ASP 1650.0151
GLN 1660.0146
ASP 1670.0123
SER 1680.0156
LYS 1690.0129
ASP 1700.0079
SER 1710.0123
THR 1720.0099
TYR 1730.0106
SER 1740.0058
MET 1750.0059
SER 1760.0065
SER 1770.0067
THR 1780.0065
LEU 1790.0136
THR 1800.0152
LEU 1810.0182
THR 1820.0294
LYS 1830.0278
ASP 1840.0328
GLU 1850.0270
TYR 1860.0193
GLU 1870.0228
ARG 1880.0250
HIS 1890.0133
ASN 1900.0074
SER 1910.0055
TYR 1920.0063
THR 1930.0123
CYS 1940.0105
GLU 1950.0071
ALA 1960.0059
THR 1970.0189
HIS 1980.0264
LYS 1990.0438
THR 2000.0471
SER 2010.0541
THR 2020.0758
SER 2030.0363
PRO 2040.0167
ILE 2050.0166
VAL 2060.0072
LYS 2070.0088
SER 2080.0104
PHE 2090.0144
ASN 2100.0120
ARG 2110.0140
ASN 2120.0336
GLU 2130.0377
CYS 2140.0440
GLU 10.0198
VAL 20.0127
GLN 30.0107
LEU 40.0057
VAL 50.0054
GLU 60.0040
SER 70.0052
GLY 80.0048
GLY 90.0068
GLY 100.0131
LEU 110.0126
VAL 120.0128
LYS 130.0163
PRO 140.0145
GLY 150.0143
GLY 160.0130
SER 170.0115
LEU 180.0096
LYS 190.0061
LEU 200.0061
SER 210.0059
CYS 220.0050
ALA 230.0071
ALA 240.0087
SER 250.0124
GLY 260.0145
PHE 270.0131
ILE 280.0119
PHE 290.0104
SER 300.0104
ASP 310.0089
TYR 320.0079
TYR 330.0074
MET 340.0047
TYR 350.0042
TRP 360.0042
VAL 370.0030
ARG 380.0025
GLN 390.0027
THR 400.0047
PRO 410.0049
GLU 420.0044
LYS 430.0024
ARG 440.0042
LEU 450.0043
GLU 460.0022
TRP 470.0027
VAL 480.0021
ALA 490.0043
THR 500.0049
ILE 510.0056
SER 520.0086
ASP 520.0095
GLY 530.0111
ASN 540.0114
SER 550.0099
TYR 560.0088
THR 570.0061
TYR 580.0046
TYR 590.0040
VAL 600.0037
ASP 610.0042
SER 620.0050
VAL 630.0053
LYS 640.0058
GLY 650.0072
ARG 660.0082
PHE 670.0058
THR 680.0056
ILE 690.0055
SER 700.0067
ARG 710.0078
ASP 720.0088
ASN 730.0103
ALA 740.0113
LYS 750.0108
ASN 760.0100
ASN 770.0080
LEU 780.0061
TYR 790.0058
LEU 800.0061
GLN 810.0069
MET 820.0089
SER 820.0097
SER 820.0106
LEU 820.0101
LYS 830.0108
SER 840.0106
GLU 850.0093
ASP 860.0080
THR 870.0074
ALA 880.0057
ILE 890.0045
TYR 900.0042
TYR 910.0020
CYS 920.0024
ALA 930.0037
ARG 940.0051
ASP 950.0050
GLY 960.0061
PRO 970.0056
THR 980.0063
ASP 990.0063
SER 1000.0053
SER 1000.0050
GLY 1000.0053
TYR 1000.0046
GLY 1000.0046
GLY 1000.0042
PHE 1000.0042
GLY 1010.0041
TYR 1020.0041
TRP 1030.0027
GLY 1040.0021
GLN 1050.0029
GLY 1060.0050
THR 1070.0048
LEU 1080.0072
VAL 1090.0099
THR 1100.0106
VAL 1110.0119
SER 1120.0156
GLU 1130.0182
ALA 1140.0167
LYS 1150.0249
THR 1160.0241
THR 1170.0244
PRO 1180.0245
PRO 1190.0159
SER 1200.0145
VAL 1210.0077
TYR 1220.0086
PRO 1230.0103
LEU 1240.0081
ALA 1250.0089
PRO 1260.0114
GLY 1270.0210
SER 1280.0390
ALA 1290.0496
ALA 1300.0369
GLN 1330.0505
THR 1340.0455
ASN 1350.0529
SER 1360.0352
MET 1370.0255
VAL 1380.0133
THR 1390.0078
LEU 1400.0085
GLY 1410.0086
CYS 1420.0075
LEU 1430.0083
VAL 1440.0082
LYS 1450.0099
GLY 1460.0138
TYR 1470.0147
PHE 1480.0163
PRO 1490.0170
GLU 1500.0171
PRO 1510.0225
VAL 1520.0173
THR 1530.0157
VAL 1540.0040
THR 1560.0084
TRP 1570.0134
ASN 1620.0238
SER 1630.0255
GLY 1640.0282
SER 1650.0290
LEU 1660.0217
SER 1670.0224
SER 1680.0203
GLY 1690.0149
VAL 1710.0061
HIS 1720.0032
THR 1730.0054
PHE 1740.0088
PRO 1750.0113
ALA 1760.0114
VAL 1770.0091
LEU 1780.0100
GLN 1790.0113
SER 1800.0193
ASP 1830.0173
LEU 1840.0149
TYR 1850.0116
THR 1860.0091
LEU 1870.0082
SER 1880.0074
SER 1890.0073
SER 1900.0065
VAL 1910.0085
THR 1920.0159
VAL 1930.0210
PRO 1940.0227
SER 1950.0099
SER 1960.0231
PRO 1980.0278
ARG 1990.0231
PRO 2000.0315
SER 2020.0475
GLU 2030.0444
THR 2040.0360
VAL 2050.0224
THR 2060.0182
CYS 2080.0103
ASN 2090.0054
VAL 2100.0055
ALA 2110.0186
HIS 2120.0228
PRO 2130.0337
ALA 2140.0354
SER 2150.0375
SER 2160.0395
THR 2170.0271
LYS 2180.0174
VAL 2190.0124
ASP 2200.0097
LYS 2210.0142
LYS 2220.0202
ILE 2230.0192
VAL 2260.0230
PRO 2270.0147
ARG 2280.0193
ASP 2320.0361
CYS 2330.0549

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.