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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0525
ILE 4790.0406
PHE 4800.0331
ILE 4810.0323
SER 4820.0401
ASP 4830.0411
ASP 4840.0436
LYS 4850.0251
ASP 4860.0270
SER 4870.0334
LEU 4880.0255
LYS 4890.0146
CYS 4900.0107
PRO 4910.0047
CYS 4920.0035
ASP 4930.0022
PRO 4940.0107
GLU 4950.0073
MET 4960.0104
VAL 4970.0165
SER 4980.0238
GLN 4990.0471
SER 5000.0525
THR 5010.0168
CYS 5020.0228
ARG 5030.0196
PHE 5040.0247
PHE 5050.0198
VAL 5060.0126
CYS 5070.0111
LYS 5080.0111
CYS 5090.0059
VAL 5100.0085
GLU 5110.0092
ARG 5120.0152
SER 20.0119
VAL 30.0121
LEU 40.0094
SER 50.0133
GLN 60.0108
SER 70.0113
PRO 80.0192
ALA 90.0227
ILE 100.0257
LEU 110.0249
SER 120.0271
ALA 130.0267
SER 140.0283
PRO 150.0262
GLY 160.0253
GLU 170.0262
LYS 180.0219
VAL 190.0198
THR 200.0140
MET 210.0119
THR 220.0082
CYS 230.0068
ARG 240.0099
ALA 250.0127
ARG 260.0171
SER 270.0179
SER 290.0151
VAL 300.0115
SER 310.0126
TYR 320.0076
MET 330.0059
HIS 340.0055
TRP 350.0060
TYR 360.0072
GLN 370.0099
GLN 380.0104
LYS 390.0134
SER 400.0153
GLY 410.0090
SER 420.0051
SER 430.0031
PRO 440.0053
LYS 450.0064
PRO 460.0064
TRP 470.0097
ILE 480.0088
HIS 490.0078
ALA 500.0093
THR 510.0096
SER 520.0125
ASN 530.0136
LEU 540.0146
ALA 550.0127
SER 560.0168
GLY 570.0193
VAL 580.0178
PRO 590.0197
ALA 600.0202
ARG 610.0204
PHE 620.0162
SER 630.0141
GLY 640.0111
SER 650.0118
GLY 660.0114
SER 670.0151
GLY 680.0166
THR 690.0137
SER 700.0105
TYR 710.0072
SER 720.0073
LEU 730.0098
THR 740.0147
ILE 750.0183
SER 760.0211
ARG 770.0231
VAL 780.0229
GLU 790.0252
ALA 800.0227
GLU 810.0215
ASP 820.0196
ALA 830.0198
ALA 840.0179
THR 850.0158
TYR 860.0097
TYR 870.0077
CYS 880.0054
GLN 890.0034
GLN 900.0042
TRP 910.0045
SER 920.0040
SER 930.0044
HIS 940.0046
PRO 950.0058
PRO 960.0037
THR 970.0026
PHE 980.0077
GLY 990.0099
SER 1000.0126
GLY 1010.0149
THR 1020.0159
LYS 1030.0201
LEU 1040.0225
GLU 1050.0244
ILE 1060.0249
LYS 1070.0262
ARG 1080.0213
ALA 1090.0175
ASP 1100.0155
ALA 1110.0131
ALA 1120.0100
PRO 1130.0078
THR 1140.0079
VAL 1150.0054
SER 1160.0049
ILE 1170.0044
PHE 1180.0038
PRO 1190.0041
PRO 1200.0046
SER 1210.0049
SER 1220.0089
GLU 1230.0070
GLN 1240.0065
LEU 1250.0127
THR 1260.0156
SER 1270.0158
GLY 1280.0173
GLY 1290.0130
ALA 1300.0098
SER 1310.0046
VAL 1320.0030
VAL 1330.0026
CYS 1340.0050
PHE 1350.0050
LEU 1360.0052
ASN 1370.0085
ASN 1380.0103
PHE 1390.0109
TYR 1400.0153
PRO 1410.0161
LYS 1420.0161
ASP 1430.0116
ILE 1440.0076
ASN 1450.0054
VAL 1460.0029
LYS 1470.0033
TRP 1480.0027
LYS 1490.0055
ILE 1500.0063
ASP 1510.0053
GLY 1520.0035
SER 1530.0059
GLU 1540.0099
ARG 1550.0094
GLN 1560.0110
ASN 1570.0135
GLY 1580.0105
VAL 1590.0071
LEU 1600.0048
ASN 1610.0069
SER 1620.0080
TRP 1630.0074
THR 1640.0153
ASP 1650.0173
GLN 1660.0173
ASP 1670.0206
SER 1680.0234
LYS 1690.0264
ASP 1700.0191
SER 1710.0191
THR 1720.0167
TYR 1730.0131
SER 1740.0099
MET 1750.0095
SER 1760.0049
SER 1770.0030
THR 1780.0022
LEU 1790.0044
THR 1800.0078
LEU 1810.0117
THR 1820.0179
LYS 1830.0180
ASP 1840.0203
GLU 1850.0171
TYR 1860.0142
GLU 1870.0164
ARG 1880.0181
HIS 1890.0134
ASN 1900.0113
SER 1910.0067
TYR 1920.0050
THR 1930.0027
CYS 1940.0024
GLU 1950.0039
ALA 1960.0039
THR 1970.0026
HIS 1980.0068
LYS 1990.0106
THR 2000.0122
SER 2010.0104
THR 2020.0107
SER 2030.0098
PRO 2040.0066
ILE 2050.0066
VAL 2060.0045
LYS 2070.0040
SER 2080.0036
PHE 2090.0061
ASN 2100.0087
ARG 2110.0105
ASN 2120.0113
GLU 2130.0100
CYS 2140.0132
GLU 10.0168
VAL 20.0111
GLN 30.0132
LEU 40.0103
VAL 50.0136
GLU 60.0145
SER 70.0193
GLY 80.0228
GLY 90.0211
GLY 100.0234
LEU 110.0283
VAL 120.0294
LYS 130.0361
PRO 140.0313
GLY 150.0274
GLY 160.0289
SER 170.0252
LEU 180.0239
LYS 190.0214
LEU 200.0184
SER 210.0173
CYS 220.0141
ALA 230.0133
ALA 240.0092
SER 250.0094
GLY 260.0110
PHE 270.0078
ILE 280.0068
PHE 290.0046
SER 300.0011
ASP 310.0054
TYR 320.0038
TYR 330.0021
MET 340.0056
TYR 350.0059
TRP 360.0077
VAL 370.0052
ARG 380.0043
GLN 390.0056
THR 400.0095
PRO 410.0141
GLU 420.0149
LYS 430.0107
ARG 440.0086
LEU 450.0047
GLU 460.0028
TRP 470.0033
VAL 480.0052
ALA 490.0080
THR 500.0068
ILE 510.0074
SER 520.0037
ASP 520.0051
GLY 530.0092
ASN 540.0062
SER 550.0037
TYR 560.0051
THR 570.0104
TYR 580.0087
TYR 590.0091
VAL 600.0078
ASP 610.0115
SER 620.0067
VAL 630.0072
LYS 640.0126
GLY 650.0179
ARG 660.0156
PHE 670.0144
THR 680.0164
ILE 690.0134
SER 700.0132
ARG 710.0109
ASP 720.0134
ASN 730.0081
ALA 740.0111
LYS 750.0137
ASN 760.0094
ASN 770.0120
LEU 780.0116
TYR 790.0147
LEU 800.0151
GLN 810.0200
MET 820.0183
SER 820.0200
SER 820.0173
LEU 820.0175
LYS 830.0176
SER 840.0239
GLU 850.0181
ASP 860.0132
THR 870.0174
ALA 880.0132
ILE 890.0119
TYR 900.0095
TYR 910.0059
CYS 920.0076
ALA 930.0059
ARG 940.0047
ASP 950.0038
GLY 960.0044
PRO 970.0049
THR 980.0038
ASP 990.0044
SER 1000.0040
SER 1000.0036
GLY 1000.0031
TYR 1000.0036
GLY 1000.0040
GLY 1000.0046
PHE 1000.0050
GLY 1010.0051
TYR 1020.0056
TRP 1030.0052
GLY 1040.0083
GLN 1050.0096
GLY 1060.0123
THR 1070.0151
LEU 1080.0191
VAL 1090.0194
THR 1100.0262
VAL 1110.0280
SER 1120.0387
GLU 1130.0438
ALA 1140.0341
LYS 1150.0229
THR 1160.0219
THR 1170.0185
PRO 1180.0234
PRO 1190.0156
SER 1200.0134
VAL 1210.0067
TYR 1220.0056
PRO 1230.0061
LEU 1240.0039
ALA 1250.0026
PRO 1260.0052
GLY 1270.0089
SER 1280.0202
ALA 1290.0268
ALA 1300.0249
GLN 1330.0444
THR 1340.0470
ASN 1350.0515
SER 1360.0406
MET 1370.0291
VAL 1380.0193
THR 1390.0087
LEU 1400.0061
GLY 1410.0075
CYS 1420.0076
LEU 1430.0066
VAL 1440.0057
LYS 1450.0066
GLY 1460.0084
TYR 1470.0113
PHE 1480.0191
PRO 1490.0233
GLU 1500.0249
PRO 1510.0324
VAL 1520.0224
THR 1530.0195
VAL 1540.0110
THR 1560.0149
TRP 1570.0142
ASN 1620.0178
SER 1630.0221
GLY 1640.0257
SER 1650.0214
LEU 1660.0173
SER 1670.0215
SER 1680.0208
GLY 1690.0195
VAL 1710.0114
HIS 1720.0095
THR 1730.0085
PHE 1740.0062
PRO 1750.0062
ALA 1760.0093
VAL 1770.0116
LEU 1780.0142
GLN 1790.0156
SER 1800.0278
ASP 1830.0195
LEU 1840.0135
TYR 1850.0118
THR 1860.0069
LEU 1870.0058
SER 1880.0068
SER 1890.0077
SER 1900.0088
VAL 1910.0102
THR 1920.0169
VAL 1930.0158
PRO 1940.0188
SER 1950.0159
SER 1960.0068
PRO 1980.0044
ARG 1990.0027
PRO 2000.0095
SER 2020.0143
GLU 2030.0150
THR 2040.0148
VAL 2050.0112
THR 2060.0110
CYS 2080.0104
ASN 2090.0076
VAL 2100.0103
ALA 2110.0227
HIS 2120.0261
PRO 2130.0400
ALA 2140.0401
SER 2150.0390
SER 2160.0457
THR 2170.0314
LYS 2180.0239
VAL 2190.0166
ASP 2200.0065
LYS 2210.0064
LYS 2220.0074
ILE 2230.0059
VAL 2260.0036
PRO 2270.0031
ARG 2280.0042
ASP 2320.0079
CYS 2330.0114

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.