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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0566
ILE 4790.0338
PHE 4800.0275
ILE 4810.0297
SER 4820.0256
ASP 4830.0247
ASP 4840.0249
LYS 4850.0189
ASP 4860.0200
SER 4870.0245
LEU 4880.0208
LYS 4890.0187
CYS 4900.0137
PRO 4910.0080
CYS 4920.0066
ASP 4930.0067
PRO 4940.0148
GLU 4950.0157
MET 4960.0145
VAL 4970.0333
SER 4980.0300
GLN 4990.0390
SER 5000.0566
THR 5010.0463
CYS 5020.0216
ARG 5030.0172
PHE 5040.0199
PHE 5050.0226
VAL 5060.0195
CYS 5070.0138
LYS 5080.0071
CYS 5090.0022
VAL 5100.0041
GLU 5110.0089
ARG 5120.0182
SER 20.0255
VAL 30.0232
LEU 40.0160
SER 50.0133
GLN 60.0044
SER 70.0038
PRO 80.0155
ALA 90.0169
ILE 100.0209
LEU 110.0232
SER 120.0268
ALA 130.0284
SER 140.0309
PRO 150.0273
GLY 160.0365
GLU 170.0389
LYS 180.0336
VAL 190.0257
THR 200.0177
MET 210.0093
THR 220.0036
CYS 230.0094
ARG 240.0181
ALA 250.0245
ARG 260.0353
SER 270.0382
SER 290.0316
VAL 300.0240
SER 310.0243
TYR 320.0134
MET 330.0115
HIS 340.0085
TRP 350.0065
TYR 360.0045
GLN 370.0040
GLN 380.0025
LYS 390.0047
SER 400.0072
GLY 410.0067
SER 420.0046
SER 430.0034
PRO 440.0028
LYS 450.0039
PRO 460.0061
TRP 470.0093
ILE 480.0101
HIS 490.0108
ALA 500.0149
THR 510.0141
SER 520.0159
ASN 530.0159
LEU 540.0167
ALA 550.0180
SER 560.0238
GLY 570.0247
VAL 580.0207
PRO 590.0253
ALA 600.0288
ARG 610.0274
PHE 620.0214
SER 630.0190
GLY 640.0133
SER 650.0215
GLY 660.0221
SER 670.0290
GLY 680.0343
THR 690.0291
SER 700.0238
TYR 710.0135
SER 720.0099
LEU 730.0122
THR 740.0174
ILE 750.0234
SER 760.0324
ARG 770.0347
VAL 780.0250
GLU 790.0219
ALA 800.0135
GLU 810.0073
ASP 820.0087
ALA 830.0085
ALA 840.0066
THR 850.0063
TYR 860.0026
TYR 870.0015
CYS 880.0046
GLN 890.0084
GLN 900.0088
TRP 910.0063
SER 920.0079
SER 930.0087
HIS 940.0088
PRO 950.0055
PRO 960.0051
THR 970.0088
PHE 980.0058
GLY 990.0050
SER 1000.0066
GLY 1010.0060
THR 1020.0079
LYS 1030.0116
LEU 1040.0134
GLU 1050.0161
ILE 1060.0167
LYS 1070.0210
ARG 1080.0143
ALA 1090.0192
ASP 1100.0213
ALA 1110.0205
ALA 1120.0189
PRO 1130.0125
THR 1140.0103
VAL 1150.0085
SER 1160.0056
ILE 1170.0044
PHE 1180.0038
PRO 1190.0059
PRO 1200.0067
SER 1210.0079
SER 1220.0180
GLU 1230.0120
GLN 1240.0105
LEU 1250.0208
THR 1260.0258
SER 1270.0266
GLY 1280.0295
GLY 1290.0211
ALA 1300.0138
SER 1310.0082
VAL 1320.0056
VAL 1330.0064
CYS 1340.0067
PHE 1350.0081
LEU 1360.0091
ASN 1370.0108
ASN 1380.0128
PHE 1390.0127
TYR 1400.0149
PRO 1410.0136
LYS 1420.0115
ASP 1430.0130
ILE 1440.0123
ASN 1450.0134
VAL 1460.0178
LYS 1470.0178
TRP 1480.0142
LYS 1490.0198
ILE 1500.0174
ASP 1510.0246
GLY 1520.0332
SER 1530.0316
GLU 1540.0285
ARG 1550.0257
GLN 1560.0181
ASN 1570.0205
GLY 1580.0143
VAL 1590.0129
LEU 1600.0121
ASN 1610.0098
SER 1620.0097
TRP 1630.0095
THR 1640.0118
ASP 1650.0107
GLN 1660.0106
ASP 1670.0128
SER 1680.0120
LYS 1690.0176
ASP 1700.0164
SER 1710.0134
THR 1720.0146
TYR 1730.0109
SER 1740.0107
MET 1750.0107
SER 1760.0099
SER 1770.0098
THR 1780.0095
LEU 1790.0081
THR 1800.0103
LEU 1810.0110
THR 1820.0195
LYS 1830.0237
ASP 1840.0247
GLU 1850.0143
TYR 1860.0146
GLU 1870.0228
ARG 1880.0229
HIS 1890.0214
ASN 1900.0263
SER 1910.0202
TYR 1920.0139
THR 1930.0155
CYS 1940.0112
GLU 1950.0156
ALA 1960.0165
THR 1970.0131
HIS 1980.0145
LYS 1990.0186
THR 2000.0229
SER 2010.0200
THR 2020.0236
SER 2030.0178
PRO 2040.0168
ILE 2050.0128
VAL 2060.0140
LYS 2070.0097
SER 2080.0094
PHE 2090.0137
ASN 2100.0193
ARG 2110.0201
ASN 2120.0254
GLU 2130.0105
CYS 2140.0187
GLU 10.0210
VAL 20.0131
GLN 30.0118
LEU 40.0064
VAL 50.0073
GLU 60.0071
SER 70.0047
GLY 80.0059
GLY 90.0046
GLY 100.0040
LEU 110.0040
VAL 120.0042
LYS 130.0048
PRO 140.0100
GLY 150.0121
GLY 160.0089
SER 170.0088
LEU 180.0075
LYS 190.0082
LEU 200.0065
SER 210.0062
CYS 220.0064
ALA 230.0074
ALA 240.0070
SER 250.0115
GLY 260.0142
PHE 270.0124
ILE 280.0111
PHE 290.0073
SER 300.0071
ASP 310.0080
TYR 320.0052
TYR 330.0040
MET 340.0007
TYR 350.0012
TRP 360.0027
VAL 370.0030
ARG 380.0030
GLN 390.0026
THR 400.0045
PRO 410.0043
GLU 420.0053
LYS 430.0035
ARG 440.0039
LEU 450.0035
GLU 460.0010
TRP 470.0010
VAL 480.0013
ALA 490.0035
THR 500.0030
ILE 510.0039
SER 520.0084
ASP 520.0095
GLY 530.0138
ASN 540.0166
SER 550.0116
TYR 560.0116
THR 570.0084
TYR 580.0045
TYR 590.0047
VAL 600.0046
ASP 610.0048
SER 620.0064
VAL 630.0055
LYS 640.0053
GLY 650.0068
ARG 660.0080
PHE 670.0062
THR 680.0060
ILE 690.0048
SER 700.0055
ARG 710.0034
ASP 720.0037
ASN 730.0036
ALA 740.0052
LYS 750.0073
ASN 760.0063
ASN 770.0054
LEU 780.0045
TYR 790.0059
LEU 800.0060
GLN 810.0075
MET 820.0088
SER 820.0103
SER 820.0106
LEU 820.0083
LYS 830.0093
SER 840.0082
GLU 850.0078
ASP 860.0065
THR 870.0048
ALA 880.0041
ILE 890.0033
TYR 900.0038
TYR 910.0036
CYS 920.0037
ALA 930.0028
ARG 940.0018
ASP 950.0014
GLY 960.0026
PRO 970.0019
THR 980.0025
ASP 990.0023
SER 1000.0019
SER 1000.0016
GLY 1000.0018
TYR 1000.0022
GLY 1000.0025
GLY 1000.0025
PHE 1000.0025
GLY 1010.0025
TYR 1020.0029
TRP 1030.0038
GLY 1040.0045
GLN 1050.0046
GLY 1060.0029
THR 1070.0035
LEU 1080.0043
VAL 1090.0043
THR 1100.0051
VAL 1110.0069
SER 1120.0110
GLU 1130.0162
ALA 1140.0203
LYS 1150.0241
THR 1160.0187
THR 1170.0189
PRO 1180.0141
PRO 1190.0080
SER 1200.0046
VAL 1210.0050
TYR 1220.0067
PRO 1230.0094
LEU 1240.0067
ALA 1250.0072
PRO 1260.0088
GLY 1270.0133
SER 1280.0229
ALA 1290.0270
ALA 1300.0302
GLN 1330.0377
THR 1340.0424
ASN 1350.0485
SER 1360.0512
MET 1370.0375
VAL 1380.0229
THR 1390.0057
LEU 1400.0045
GLY 1410.0059
CYS 1420.0073
LEU 1430.0055
VAL 1440.0044
LYS 1450.0035
GLY 1460.0069
TYR 1470.0111
PHE 1480.0130
PRO 1490.0103
GLU 1500.0074
PRO 1510.0107
VAL 1520.0096
THR 1530.0116
VAL 1540.0109
THR 1560.0160
TRP 1570.0164
ASN 1620.0252
SER 1630.0321
GLY 1640.0323
SER 1650.0262
LEU 1660.0193
SER 1670.0250
SER 1680.0251
GLY 1690.0180
VAL 1710.0024
HIS 1720.0033
THR 1730.0066
PHE 1740.0087
PRO 1750.0087
ALA 1760.0070
VAL 1770.0079
LEU 1780.0131
GLN 1790.0187
SER 1800.0310
ASP 1830.0197
LEU 1840.0149
TYR 1850.0085
THR 1860.0032
LEU 1870.0047
SER 1880.0073
SER 1890.0061
SER 1900.0032
VAL 1910.0028
THR 1920.0133
VAL 1930.0241
PRO 1940.0371
SER 1950.0306
SER 1960.0313
PRO 1980.0254
ARG 1990.0067
PRO 2000.0105
SER 2020.0208
GLU 2030.0319
THR 2040.0293
VAL 2050.0173
THR 2060.0189
CYS 2080.0150
ASN 2090.0168
VAL 2100.0114
ALA 2110.0141
HIS 2120.0129
PRO 2130.0160
ALA 2140.0172
SER 2150.0166
SER 2160.0168
THR 2170.0101
LYS 2180.0154
VAL 2190.0144
ASP 2200.0189
LYS 2210.0161
LYS 2220.0196
ILE 2230.0147
VAL 2260.0120
PRO 2270.0132
ARG 2280.0133
ASP 2320.0078
CYS 2330.0238

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.