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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 24  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0702
ILE 4790.0326
PHE 4800.0297
ILE 4810.0301
SER 4820.0310
ASP 4830.0325
ASP 4840.0314
LYS 4850.0186
ASP 4860.0163
SER 4870.0193
LEU 4880.0178
LYS 4890.0141
CYS 4900.0153
PRO 4910.0090
CYS 4920.0084
ASP 4930.0075
PRO 4940.0195
GLU 4950.0187
MET 4960.0203
VAL 4970.0283
SER 4980.0340
GLN 4990.0519
SER 5000.0702
THR 5010.0349
CYS 5020.0238
ARG 5030.0248
PHE 5040.0245
PHE 5050.0236
VAL 5060.0203
CYS 5070.0178
LYS 5080.0152
CYS 5090.0133
VAL 5100.0194
GLU 5110.0211
ARG 5120.0421
SER 20.0149
VAL 30.0171
LEU 40.0135
SER 50.0128
GLN 60.0133
SER 70.0142
PRO 80.0109
ALA 90.0114
ILE 100.0091
LEU 110.0062
SER 120.0057
ALA 130.0110
SER 140.0163
PRO 150.0202
GLY 160.0224
GLU 170.0176
LYS 180.0142
VAL 190.0088
THR 200.0103
MET 210.0109
THR 220.0101
CYS 230.0113
ARG 240.0098
ALA 250.0101
ARG 260.0189
SER 270.0156
SER 290.0119
VAL 300.0091
SER 310.0076
TYR 320.0043
MET 330.0057
HIS 340.0079
TRP 350.0107
TYR 360.0119
GLN 370.0135
GLN 380.0118
LYS 390.0121
SER 400.0126
GLY 410.0046
SER 420.0018
SER 430.0031
PRO 440.0088
LYS 450.0090
PRO 460.0103
TRP 470.0117
ILE 480.0091
HIS 490.0063
ALA 500.0057
THR 510.0060
SER 520.0074
ASN 530.0072
LEU 540.0109
ALA 550.0134
SER 560.0211
GLY 570.0253
VAL 580.0202
PRO 590.0203
ALA 600.0194
ARG 610.0184
PHE 620.0138
SER 630.0108
GLY 640.0097
SER 650.0081
GLY 660.0065
SER 670.0067
GLY 680.0073
THR 690.0066
SER 700.0061
TYR 710.0068
SER 720.0092
LEU 730.0110
THR 740.0118
ILE 750.0141
SER 760.0159
ARG 770.0202
VAL 780.0174
GLU 790.0209
ALA 800.0188
GLU 810.0216
ASP 820.0165
ALA 830.0138
ALA 840.0149
THR 850.0146
TYR 860.0125
TYR 870.0125
CYS 880.0121
GLN 890.0093
GLN 900.0055
TRP 910.0044
SER 920.0082
SER 930.0126
HIS 940.0115
PRO 950.0083
PRO 960.0057
THR 970.0087
PHE 980.0117
GLY 990.0151
SER 1000.0154
GLY 1010.0151
THR 1020.0134
LYS 1030.0130
LEU 1040.0110
GLU 1050.0091
ILE 1060.0117
LYS 1070.0133
ARG 1080.0186
ALA 1090.0231
ASP 1100.0174
ALA 1110.0146
ALA 1120.0114
PRO 1130.0064
THR 1140.0059
VAL 1150.0055
SER 1160.0071
ILE 1170.0076
PHE 1180.0075
PRO 1190.0085
PRO 1200.0089
SER 1210.0109
SER 1220.0157
GLU 1230.0161
GLN 1240.0120
LEU 1250.0169
THR 1260.0217
SER 1270.0181
GLY 1280.0169
GLY 1290.0111
ALA 1300.0094
SER 1310.0048
VAL 1320.0052
VAL 1330.0070
CYS 1340.0063
PHE 1350.0059
LEU 1360.0058
ASN 1370.0043
ASN 1380.0066
PHE 1390.0071
TYR 1400.0090
PRO 1410.0084
LYS 1420.0045
ASP 1430.0081
ILE 1440.0065
ASN 1450.0089
VAL 1460.0074
LYS 1470.0077
TRP 1480.0078
LYS 1490.0096
ILE 1500.0104
ASP 1510.0111
GLY 1520.0135
SER 1530.0138
GLU 1540.0167
ARG 1550.0126
GLN 1560.0130
ASN 1570.0153
GLY 1580.0051
VAL 1590.0050
LEU 1600.0095
ASN 1610.0090
SER 1620.0087
TRP 1630.0078
THR 1640.0092
ASP 1650.0101
GLN 1660.0095
ASP 1670.0172
SER 1680.0238
LYS 1690.0316
ASP 1700.0221
SER 1710.0166
THR 1720.0110
TYR 1730.0054
SER 1740.0050
MET 1750.0051
SER 1760.0073
SER 1770.0069
THR 1780.0066
LEU 1790.0051
THR 1800.0040
LEU 1810.0082
THR 1820.0178
LYS 1830.0203
ASP 1840.0252
GLU 1850.0213
TYR 1860.0162
GLU 1870.0209
ARG 1880.0230
HIS 1890.0165
ASN 1900.0123
SER 1910.0075
TYR 1920.0067
THR 1930.0082
CYS 1940.0090
GLU 1950.0090
ALA 1960.0077
THR 1970.0101
HIS 1980.0092
LYS 1990.0133
THR 2000.0155
SER 2010.0146
THR 2020.0192
SER 2030.0109
PRO 2040.0103
ILE 2050.0080
VAL 2060.0109
LYS 2070.0101
SER 2080.0091
PHE 2090.0102
ASN 2100.0097
ARG 2110.0131
ASN 2120.0134
GLU 2130.0142
CYS 2140.0151
GLU 10.0277
VAL 20.0160
GLN 30.0143
LEU 40.0089
VAL 50.0113
GLU 60.0106
SER 70.0131
GLY 80.0167
GLY 90.0190
GLY 100.0227
LEU 110.0230
VAL 120.0256
LYS 130.0291
PRO 140.0284
GLY 150.0313
GLY 160.0286
SER 170.0237
LEU 180.0205
LYS 190.0126
LEU 200.0116
SER 210.0083
CYS 220.0065
ALA 230.0088
ALA 240.0099
SER 250.0143
GLY 260.0172
PHE 270.0149
ILE 280.0131
PHE 290.0102
SER 300.0128
ASP 310.0076
TYR 320.0063
TYR 330.0079
MET 340.0065
TYR 350.0069
TRP 360.0078
VAL 370.0091
ARG 380.0110
GLN 390.0126
THR 400.0193
PRO 410.0222
GLU 420.0210
LYS 430.0107
ARG 440.0137
LEU 450.0114
GLU 460.0131
TRP 470.0117
VAL 480.0097
ALA 490.0129
THR 500.0122
ILE 510.0122
SER 520.0147
ASP 520.0133
GLY 530.0160
ASN 540.0199
SER 550.0171
TYR 560.0188
THR 570.0172
TYR 580.0169
TYR 590.0170
VAL 600.0180
ASP 610.0344
SER 620.0340
VAL 630.0263
LYS 640.0289
GLY 650.0266
ARG 660.0245
PHE 670.0184
THR 680.0149
ILE 690.0122
SER 700.0126
ARG 710.0107
ASP 720.0131
ASN 730.0171
ALA 740.0213
LYS 750.0169
ASN 760.0126
ASN 770.0075
LEU 780.0048
TYR 790.0060
LEU 800.0100
GLN 810.0128
MET 820.0187
SER 820.0220
SER 820.0274
LEU 820.0280
LYS 830.0326
SER 840.0341
GLU 850.0331
ASP 860.0262
THR 870.0266
ALA 880.0191
ILE 890.0150
TYR 900.0112
TYR 910.0053
CYS 920.0036
ALA 930.0039
ARG 940.0041
ASP 950.0048
GLY 960.0035
PRO 970.0032
THR 980.0077
ASP 990.0096
SER 1000.0049
SER 1000.0049
GLY 1000.0057
TYR 1000.0055
GLY 1000.0051
GLY 1000.0040
PHE 1000.0035
GLY 1010.0032
TYR 1020.0032
TRP 1030.0029
GLY 1040.0060
GLN 1050.0089
GLY 1060.0099
THR 1070.0132
LEU 1080.0148
VAL 1090.0193
THR 1100.0218
VAL 1110.0242
SER 1120.0184
GLU 1130.0164
ALA 1140.0205
LYS 1150.0323
THR 1160.0261
THR 1170.0267
PRO 1180.0139
PRO 1190.0133
SER 1200.0157
VAL 1210.0139
TYR 1220.0111
PRO 1230.0110
LEU 1240.0076
ALA 1250.0061
PRO 1260.0051
GLY 1270.0095
SER 1280.0142
ALA 1290.0238
ALA 1300.0229
GLN 1330.0332
THR 1340.0208
ASN 1350.0199
SER 1360.0100
MET 1370.0116
VAL 1380.0040
THR 1390.0024
LEU 1400.0043
GLY 1410.0069
CYS 1420.0096
LEU 1430.0098
VAL 1440.0122
LYS 1450.0141
GLY 1460.0162
TYR 1470.0164
PHE 1480.0186
PRO 1490.0149
GLU 1500.0122
PRO 1510.0124
VAL 1520.0111
THR 1530.0111
VAL 1540.0101
THR 1560.0088
TRP 1570.0054
ASN 1620.0023
SER 1630.0064
GLY 1640.0080
SER 1650.0046
LEU 1660.0041
SER 1670.0074
SER 1680.0068
GLY 1690.0045
VAL 1710.0031
HIS 1720.0029
THR 1730.0047
PHE 1740.0072
PRO 1750.0093
ALA 1760.0118
VAL 1770.0151
LEU 1780.0176
GLN 1790.0247
SER 1800.0290
ASP 1830.0196
LEU 1840.0206
TYR 1850.0187
THR 1860.0148
LEU 1870.0116
SER 1880.0089
SER 1890.0071
SER 1900.0045
VAL 1910.0022
THR 1920.0118
VAL 1930.0182
PRO 1940.0258
SER 1950.0254
SER 1960.0441
PRO 1980.0331
ARG 1990.0265
PRO 2000.0292
SER 2020.0461
GLU 2030.0331
THR 2040.0143
VAL 2050.0042
THR 2060.0056
CYS 2080.0089
ASN 2090.0109
VAL 2100.0121
ALA 2110.0128
HIS 2120.0129
PRO 2130.0164
ALA 2140.0186
SER 2150.0172
SER 2160.0144
THR 2170.0131
LYS 2180.0148
VAL 2190.0127
ASP 2200.0141
LYS 2210.0129
LYS 2220.0103
ILE 2230.0104
VAL 2260.0204
PRO 2270.0174
ARG 2280.0137
ASP 2320.0105
CYS 2330.0076

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.