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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0665
ILE 4790.0151
PHE 4800.0135
ILE 4810.0135
SER 4820.0106
ASP 4830.0096
ASP 4840.0083
LYS 4850.0055
ASP 4860.0038
SER 4870.0065
LEU 4880.0061
LYS 4890.0054
CYS 4900.0047
PRO 4910.0023
CYS 4920.0017
ASP 4930.0025
PRO 4940.0082
GLU 4950.0092
MET 4960.0092
VAL 4970.0136
SER 4980.0122
GLN 4990.0136
SER 5000.0324
THR 5010.0258
CYS 5020.0087
ARG 5030.0092
PHE 5040.0091
PHE 5050.0107
VAL 5060.0109
CYS 5070.0086
LYS 5080.0077
CYS 5090.0056
VAL 5100.0084
GLU 5110.0094
ARG 5120.0199
SER 20.0132
VAL 30.0126
LEU 40.0111
SER 50.0096
GLN 60.0074
SER 70.0061
PRO 80.0127
ALA 90.0165
ILE 100.0192
LEU 110.0155
SER 120.0171
ALA 130.0118
SER 140.0105
PRO 150.0108
GLY 160.0222
GLU 170.0234
LYS 180.0259
VAL 190.0160
THR 200.0109
MET 210.0044
THR 220.0037
CYS 230.0081
ARG 240.0098
ALA 250.0124
ARG 260.0163
SER 270.0161
SER 290.0137
VAL 300.0116
SER 310.0108
TYR 320.0083
MET 330.0088
HIS 340.0084
TRP 350.0113
TYR 360.0136
GLN 370.0167
GLN 380.0135
LYS 390.0178
SER 400.0194
GLY 410.0128
SER 420.0113
SER 430.0096
PRO 440.0128
LYS 450.0126
PRO 460.0131
TRP 470.0177
ILE 480.0141
HIS 490.0109
ALA 500.0106
THR 510.0099
SER 520.0132
ASN 530.0171
LEU 540.0238
ALA 550.0253
SER 560.0390
GLY 570.0481
VAL 580.0392
PRO 590.0427
ALA 600.0451
ARG 610.0374
PHE 620.0266
SER 630.0231
GLY 640.0150
SER 650.0116
GLY 660.0108
SER 670.0113
GLY 680.0130
THR 690.0121
SER 700.0109
TYR 710.0081
SER 720.0089
LEU 730.0117
THR 740.0185
ILE 750.0231
SER 760.0325
ARG 770.0294
VAL 780.0171
GLU 790.0214
ALA 800.0171
GLU 810.0274
ASP 820.0205
ALA 830.0202
ALA 840.0202
THR 850.0178
TYR 860.0117
TYR 870.0106
CYS 880.0092
GLN 890.0076
GLN 900.0068
TRP 910.0037
SER 920.0055
SER 930.0064
HIS 940.0058
PRO 950.0035
PRO 960.0027
THR 970.0056
PHE 980.0071
GLY 990.0093
SER 1000.0091
GLY 1010.0121
THR 1020.0115
LYS 1030.0171
LEU 1040.0159
GLU 1050.0198
ILE 1060.0166
LYS 1070.0170
ARG 1080.0168
ALA 1090.0180
ASP 1100.0121
ALA 1110.0110
ALA 1120.0073
PRO 1130.0068
THR 1140.0085
VAL 1150.0084
SER 1160.0097
ILE 1170.0092
PHE 1180.0086
PRO 1190.0083
PRO 1200.0067
SER 1210.0080
SER 1220.0108
GLU 1230.0078
GLN 1240.0057
LEU 1250.0104
THR 1260.0138
SER 1270.0121
GLY 1280.0137
GLY 1290.0078
ALA 1300.0063
SER 1310.0057
VAL 1320.0071
VAL 1330.0087
CYS 1340.0075
PHE 1350.0094
LEU 1360.0101
ASN 1370.0148
ASN 1380.0171
PHE 1390.0158
TYR 1400.0185
PRO 1410.0211
LYS 1420.0247
ASP 1430.0250
ILE 1440.0166
ASN 1450.0151
VAL 1460.0057
LYS 1470.0047
TRP 1480.0066
LYS 1490.0091
ILE 1500.0088
ASP 1510.0112
GLY 1520.0125
SER 1530.0120
GLU 1540.0094
ARG 1550.0094
GLN 1560.0081
ASN 1570.0089
GLY 1580.0127
VAL 1590.0115
LEU 1600.0110
ASN 1610.0098
SER 1620.0112
TRP 1630.0135
THR 1640.0193
ASP 1650.0230
GLN 1660.0241
ASP 1670.0270
SER 1680.0224
LYS 1690.0220
ASP 1700.0219
SER 1710.0218
THR 1720.0230
TYR 1730.0221
SER 1740.0179
MET 1750.0145
SER 1760.0103
SER 1770.0088
THR 1780.0081
LEU 1790.0069
THR 1800.0050
LEU 1810.0066
THR 1820.0127
LYS 1830.0153
ASP 1840.0183
GLU 1850.0119
TYR 1860.0111
GLU 1870.0159
ARG 1880.0154
HIS 1890.0128
ASN 1900.0157
SER 1910.0123
TYR 1920.0104
THR 1930.0111
CYS 1940.0075
GLU 1950.0056
ALA 1960.0070
THR 1970.0157
HIS 1980.0159
LYS 1990.0247
THR 2000.0219
SER 2010.0376
THR 2020.0665
SER 2030.0363
PRO 2040.0192
ILE 2050.0118
VAL 2060.0094
LYS 2070.0094
SER 2080.0095
PHE 2090.0139
ASN 2100.0147
ARG 2110.0132
ASN 2120.0164
GLU 2130.0091
CYS 2140.0020
GLU 10.0146
VAL 20.0115
GLN 30.0125
LEU 40.0099
VAL 50.0103
GLU 60.0105
SER 70.0048
GLY 80.0073
GLY 90.0057
GLY 100.0128
LEU 110.0116
VAL 120.0234
LYS 130.0380
PRO 140.0467
GLY 150.0551
GLY 160.0410
SER 170.0320
LEU 180.0206
LYS 190.0105
LEU 200.0063
SER 210.0026
CYS 220.0091
ALA 230.0101
ALA 240.0104
SER 250.0140
GLY 260.0136
PHE 270.0120
ILE 280.0113
PHE 290.0110
SER 300.0103
ASP 310.0083
TYR 320.0078
TYR 330.0072
MET 340.0081
TYR 350.0084
TRP 360.0091
VAL 370.0109
ARG 380.0092
GLN 390.0095
THR 400.0169
PRO 410.0206
GLU 420.0224
LYS 430.0107
ARG 440.0107
LEU 450.0078
GLU 460.0106
TRP 470.0104
VAL 480.0099
ALA 490.0097
THR 500.0090
ILE 510.0084
SER 520.0079
ASP 520.0087
GLY 530.0096
ASN 540.0111
SER 550.0090
TYR 560.0087
THR 570.0090
TYR 580.0092
TYR 590.0120
VAL 600.0165
ASP 610.0272
SER 620.0321
VAL 630.0259
LYS 640.0274
GLY 650.0266
ARG 660.0280
PHE 670.0182
THR 680.0128
ILE 690.0088
SER 700.0093
ARG 710.0097
ASP 720.0106
ASN 730.0122
ALA 740.0133
LYS 750.0126
ASN 760.0107
ASN 770.0095
LEU 780.0086
TYR 790.0071
LEU 800.0104
GLN 810.0127
MET 820.0220
SER 820.0331
SER 820.0412
LEU 820.0344
LYS 830.0398
SER 840.0355
GLU 850.0329
ASP 860.0233
THR 870.0152
ALA 880.0125
ILE 890.0121
TYR 900.0106
TYR 910.0091
CYS 920.0091
ALA 930.0084
ARG 940.0062
ASP 950.0037
GLY 960.0053
PRO 970.0090
THR 980.0102
ASP 990.0099
SER 1000.0058
SER 1000.0039
GLY 1000.0041
TYR 1000.0041
GLY 1000.0033
GLY 1000.0010
PHE 1000.0024
GLY 1010.0034
TYR 1020.0057
TRP 1030.0066
GLY 1040.0093
GLN 1050.0099
GLY 1060.0124
THR 1070.0104
LEU 1080.0111
VAL 1090.0094
THR 1100.0108
VAL 1110.0206
SER 1120.0268
GLU 1130.0329
ALA 1140.0157
LYS 1150.0162
THR 1160.0123
THR 1170.0146
PRO 1180.0137
PRO 1190.0112
SER 1200.0062
VAL 1210.0048
TYR 1220.0048
PRO 1230.0070
LEU 1240.0074
ALA 1250.0062
PRO 1260.0058
GLY 1270.0063
SER 1280.0066
ALA 1290.0072
ALA 1300.0061
GLN 1330.0237
THR 1340.0288
ASN 1350.0293
SER 1360.0278
MET 1370.0177
VAL 1380.0094
THR 1390.0032
LEU 1400.0050
GLY 1410.0071
CYS 1420.0069
LEU 1430.0084
VAL 1440.0090
LYS 1450.0102
GLY 1460.0090
TYR 1470.0128
PHE 1480.0166
PRO 1490.0204
GLU 1500.0272
PRO 1510.0359
VAL 1520.0280
THR 1530.0277
VAL 1540.0092
THR 1560.0027
TRP 1570.0053
ASN 1620.0090
SER 1630.0104
GLY 1640.0110
SER 1650.0148
LEU 1660.0123
SER 1670.0132
SER 1680.0161
GLY 1690.0140
VAL 1710.0114
HIS 1720.0094
THR 1730.0078
PHE 1740.0089
PRO 1750.0093
ALA 1760.0158
VAL 1770.0165
LEU 1780.0198
GLN 1790.0201
SER 1800.0215
ASP 1830.0164
LEU 1840.0152
TYR 1850.0184
THR 1860.0146
LEU 1870.0119
SER 1880.0095
SER 1890.0075
SER 1900.0069
VAL 1910.0070
THR 1920.0071
VAL 1930.0086
PRO 1940.0161
SER 1950.0184
SER 1960.0213
PRO 1980.0150
ARG 1990.0125
PRO 2000.0132
SER 2020.0208
GLU 2030.0136
THR 2040.0030
VAL 2050.0039
THR 2060.0043
CYS 2080.0043
ASN 2090.0072
VAL 2100.0128
ALA 2110.0256
HIS 2120.0266
PRO 2130.0393
ALA 2140.0355
SER 2150.0302
SER 2160.0382
THR 2170.0278
LYS 2180.0239
VAL 2190.0147
ASP 2200.0056
LYS 2210.0034
LYS 2220.0031
ILE 2230.0039
VAL 2260.0076
PRO 2270.0073
ARG 2280.0076
ASP 2320.0107
CYS 2330.0171

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.