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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 26  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1156
ILE 4790.0188
PHE 4800.0163
ILE 4810.0147
SER 4820.0175
ASP 4830.0166
ASP 4840.0151
LYS 4850.0086
ASP 4860.0099
SER 4870.0142
LEU 4880.0112
LYS 4890.0100
CYS 4900.0094
PRO 4910.0066
CYS 4920.0060
ASP 4930.0058
PRO 4940.0066
GLU 4950.0066
MET 4960.0077
VAL 4970.0146
SER 4980.0139
GLN 4990.0254
SER 5000.0180
THR 5010.0183
CYS 5020.0213
ARG 5030.0103
PHE 5040.0124
PHE 5050.0092
VAL 5060.0060
CYS 5070.0066
LYS 5080.0069
CYS 5090.0038
VAL 5100.0045
GLU 5110.0058
ARG 5120.0070
SER 20.0101
VAL 30.0096
LEU 40.0065
SER 50.0112
GLN 60.0098
SER 70.0097
PRO 80.0163
ALA 90.0202
ILE 100.0222
LEU 110.0200
SER 120.0213
ALA 130.0189
SER 140.0199
PRO 150.0147
GLY 160.0131
GLU 170.0154
LYS 180.0132
VAL 190.0138
THR 200.0087
MET 210.0098
THR 220.0094
CYS 230.0085
ARG 240.0097
ALA 250.0115
ARG 260.0153
SER 270.0144
SER 290.0130
VAL 300.0102
SER 310.0092
TYR 320.0060
MET 330.0054
HIS 340.0045
TRP 350.0063
TYR 360.0074
GLN 370.0088
GLN 380.0105
LYS 390.0136
SER 400.0149
GLY 410.0209
SER 420.0146
SER 430.0075
PRO 440.0080
LYS 450.0080
PRO 460.0061
TRP 470.0083
ILE 480.0069
HIS 490.0065
ALA 500.0054
THR 510.0058
SER 520.0066
ASN 530.0084
LEU 540.0094
ALA 550.0094
SER 560.0160
GLY 570.0178
VAL 580.0133
PRO 590.0131
ALA 600.0129
ARG 610.0086
PHE 620.0070
SER 630.0067
GLY 640.0069
SER 650.0052
GLY 660.0073
SER 670.0091
GLY 680.0105
THR 690.0107
SER 700.0085
TYR 710.0073
SER 720.0065
LEU 730.0057
THR 740.0072
ILE 750.0069
SER 760.0091
ARG 770.0097
VAL 780.0103
GLU 790.0103
ALA 800.0142
GLU 810.0147
ASP 820.0127
ALA 830.0141
ALA 840.0146
THR 850.0141
TYR 860.0088
TYR 870.0077
CYS 880.0062
GLN 890.0039
GLN 900.0034
TRP 910.0020
SER 920.0024
SER 930.0027
HIS 940.0041
PRO 950.0035
PRO 960.0028
THR 970.0037
PHE 980.0037
GLY 990.0044
SER 1000.0045
GLY 1010.0145
THR 1020.0135
LYS 1030.0168
LEU 1040.0176
GLU 1050.0204
ILE 1060.0195
LYS 1070.0231
ARG 1080.0244
ALA 1090.0253
ASP 1100.0227
ALA 1110.0218
ALA 1120.0181
PRO 1130.0107
THR 1140.0076
VAL 1150.0056
SER 1160.0079
ILE 1170.0075
PHE 1180.0070
PRO 1190.0068
PRO 1200.0079
SER 1210.0086
SER 1220.0129
GLU 1230.0133
GLN 1240.0132
LEU 1250.0128
THR 1260.0196
SER 1270.0213
GLY 1280.0130
GLY 1290.0137
ALA 1300.0092
SER 1310.0107
VAL 1320.0093
VAL 1330.0094
CYS 1340.0085
PHE 1350.0080
LEU 1360.0078
ASN 1370.0096
ASN 1380.0138
PHE 1390.0137
TYR 1400.0178
PRO 1410.0167
LYS 1420.0147
ASP 1430.0106
ILE 1440.0078
ASN 1450.0052
VAL 1460.0104
LYS 1470.0097
TRP 1480.0092
LYS 1490.0132
ILE 1500.0131
ASP 1510.0134
GLY 1520.0158
SER 1530.0156
GLU 1540.0184
ARG 1550.0159
GLN 1560.0146
ASN 1570.0152
GLY 1580.0146
VAL 1590.0126
LEU 1600.0134
ASN 1610.0072
SER 1620.0060
TRP 1630.0058
THR 1640.0122
ASP 1650.0153
GLN 1660.0169
ASP 1670.0224
SER 1680.0234
LYS 1690.0302
ASP 1700.0276
SER 1710.0237
THR 1720.0204
TYR 1730.0142
SER 1740.0108
MET 1750.0086
SER 1760.0091
SER 1770.0098
THR 1780.0116
LEU 1790.0132
THR 1800.0142
LEU 1810.0113
THR 1820.0129
LYS 1830.0050
ASP 1840.0117
GLU 1850.0158
TYR 1860.0105
GLU 1870.0125
ARG 1880.0206
HIS 1890.0180
ASN 1900.0139
SER 1910.0089
TYR 1920.0082
THR 1930.0089
CYS 1940.0083
GLU 1950.0066
ALA 1960.0073
THR 1970.0057
HIS 1980.0101
LYS 1990.0144
THR 2000.0230
SER 2010.0281
THR 2020.0334
SER 2030.0161
PRO 2040.0072
ILE 2050.0103
VAL 2060.0052
LYS 2070.0063
SER 2080.0067
PHE 2090.0039
ASN 2100.0064
ARG 2110.0086
ASN 2120.0129
GLU 2130.0124
CYS 2140.0181
GLU 10.0456
VAL 20.0279
GLN 30.0219
LEU 40.0105
VAL 50.0100
GLU 60.0079
SER 70.0071
GLY 80.0092
GLY 90.0089
GLY 100.0157
LEU 110.0185
VAL 120.0204
LYS 130.0281
PRO 140.0183
GLY 150.0140
GLY 160.0184
SER 170.0163
LEU 180.0148
LYS 190.0095
LEU 200.0063
SER 210.0051
CYS 220.0079
ALA 230.0117
ALA 240.0150
SER 250.0235
GLY 260.0278
PHE 270.0254
ILE 280.0216
PHE 290.0181
SER 300.0173
ASP 310.0132
TYR 320.0112
TYR 330.0091
MET 340.0074
TYR 350.0068
TRP 360.0064
VAL 370.0056
ARG 380.0065
GLN 390.0092
THR 400.0120
PRO 410.0165
GLU 420.0205
LYS 430.0137
ARG 440.0124
LEU 450.0077
GLU 460.0100
TRP 470.0088
VAL 480.0084
ALA 490.0087
THR 500.0087
ILE 510.0088
SER 520.0096
ASP 520.0095
GLY 530.0100
ASN 540.0104
SER 550.0113
TYR 560.0103
THR 570.0113
TYR 580.0118
TYR 590.0133
VAL 600.0146
ASP 610.0275
SER 620.0236
VAL 630.0182
LYS 640.0230
GLY 650.0246
ARG 660.0181
PHE 670.0123
THR 680.0123
ILE 690.0085
SER 700.0050
ARG 710.0084
ASP 720.0112
ASN 730.0157
ALA 740.0176
LYS 750.0175
ASN 760.0162
ASN 770.0118
LEU 780.0082
TYR 790.0065
LEU 800.0066
GLN 810.0104
MET 820.0121
SER 820.0144
SER 820.0105
LEU 820.0039
LYS 830.0056
SER 840.0121
GLU 850.0139
ASP 860.0074
THR 870.0080
ALA 880.0068
ILE 890.0059
TYR 900.0028
TYR 910.0052
CYS 920.0049
ALA 930.0053
ARG 940.0077
ASP 950.0063
GLY 960.0069
PRO 970.0075
THR 980.0082
ASP 990.0067
SER 1000.0040
SER 1000.0046
GLY 1000.0052
TYR 1000.0039
GLY 1000.0031
GLY 1000.0026
PHE 1000.0037
GLY 1010.0042
TYR 1020.0058
TRP 1030.0046
GLY 1040.0053
GLN 1050.0052
GLY 1060.0038
THR 1070.0047
LEU 1080.0070
VAL 1090.0094
THR 1100.0142
VAL 1110.0156
SER 1120.0306
GLU 1130.0367
ALA 1140.0251
LYS 1150.0187
THR 1160.0154
THR 1170.0183
PRO 1180.0159
PRO 1190.0171
SER 1200.0210
VAL 1210.0156
TYR 1220.0149
PRO 1230.0126
LEU 1240.0090
ALA 1250.0100
PRO 1260.0108
GLY 1270.0135
SER 1280.0115
ALA 1290.0093
ALA 1300.0207
GLN 1330.0423
THR 1340.0431
ASN 1350.0401
SER 1360.0202
MET 1370.0101
VAL 1380.0100
THR 1390.0099
LEU 1400.0098
GLY 1410.0106
CYS 1420.0114
LEU 1430.0126
VAL 1440.0134
LYS 1450.0199
GLY 1460.0259
TYR 1470.0220
PHE 1480.0190
PRO 1490.0206
GLU 1500.0213
PRO 1510.0192
VAL 1520.0133
THR 1530.0123
VAL 1540.0091
THR 1560.0117
TRP 1570.0134
ASN 1620.0160
SER 1630.0160
GLY 1640.0164
SER 1650.0190
LEU 1660.0152
SER 1670.0123
SER 1680.0126
GLY 1690.0101
VAL 1710.0044
HIS 1720.0028
THR 1730.0031
PHE 1740.0038
PRO 1750.0146
ALA 1760.0207
VAL 1770.0317
LEU 1780.0517
GLN 1790.0688
SER 1800.1156
ASP 1830.0608
LEU 1840.0443
TYR 1850.0320
THR 1860.0219
LEU 1870.0119
SER 1880.0074
SER 1890.0047
SER 1900.0073
VAL 1910.0100
THR 1920.0136
VAL 1930.0107
PRO 1940.0164
SER 1950.0271
SER 1960.0396
PRO 1980.0214
ARG 1990.0165
PRO 2000.0155
SER 2020.0167
GLU 2030.0075
THR 2040.0048
VAL 2050.0124
THR 2060.0130
CYS 2080.0135
ASN 2090.0132
VAL 2100.0116
ALA 2110.0141
HIS 2120.0125
PRO 2130.0166
ALA 2140.0167
SER 2150.0133
SER 2160.0170
THR 2170.0144
LYS 2180.0162
VAL 2190.0183
ASP 2200.0148
LYS 2210.0157
LYS 2220.0166
ILE 2230.0150
VAL 2260.0192
PRO 2270.0208
ARG 2280.0168
ASP 2320.0159
CYS 2330.0254

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.