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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 27  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0602
ILE 4790.0170
PHE 4800.0153
ILE 4810.0177
SER 4820.0138
ASP 4830.0110
ASP 4840.0102
LYS 4850.0085
ASP 4860.0058
SER 4870.0089
LEU 4880.0097
LYS 4890.0071
CYS 4900.0075
PRO 4910.0059
CYS 4920.0068
ASP 4930.0069
PRO 4940.0122
GLU 4950.0136
MET 4960.0129
VAL 4970.0237
SER 4980.0176
GLN 4990.0168
SER 5000.0386
THR 5010.0373
CYS 5020.0123
ARG 5030.0100
PHE 5040.0117
PHE 5050.0152
VAL 5060.0157
CYS 5070.0117
LYS 5080.0090
CYS 5090.0070
VAL 5100.0080
GLU 5110.0098
ARG 5120.0163
SER 20.0109
VAL 30.0087
LEU 40.0092
SER 50.0165
GLN 60.0170
SER 70.0190
PRO 80.0295
ALA 90.0341
ILE 100.0340
LEU 110.0277
SER 120.0227
ALA 130.0190
SER 140.0207
PRO 150.0163
GLY 160.0203
GLU 170.0182
LYS 180.0127
VAL 190.0142
THR 200.0133
MET 210.0153
THR 220.0149
CYS 230.0127
ARG 240.0110
ALA 250.0103
ARG 260.0124
SER 270.0150
SER 290.0144
VAL 300.0116
SER 310.0112
TYR 320.0075
MET 330.0086
HIS 340.0096
TRP 350.0121
TYR 360.0146
GLN 370.0172
GLN 380.0195
LYS 390.0221
SER 400.0247
GLY 410.0259
SER 420.0193
SER 430.0102
PRO 440.0146
LYS 450.0148
PRO 460.0117
TRP 470.0146
ILE 480.0109
HIS 490.0085
ALA 500.0090
THR 510.0087
SER 520.0090
ASN 530.0096
LEU 540.0118
ALA 550.0147
SER 560.0236
GLY 570.0244
VAL 580.0169
PRO 590.0133
ALA 600.0120
ARG 610.0074
PHE 620.0083
SER 630.0078
GLY 640.0095
SER 650.0111
GLY 660.0115
SER 670.0124
GLY 680.0147
THR 690.0124
SER 700.0128
TYR 710.0095
SER 720.0105
LEU 730.0109
THR 740.0081
ILE 750.0035
SER 760.0062
ARG 770.0109
VAL 780.0050
GLU 790.0052
ALA 800.0028
GLU 810.0096
ASP 820.0097
ALA 830.0141
ALA 840.0189
THR 850.0227
TYR 860.0177
TYR 870.0164
CYS 880.0134
GLN 890.0084
GLN 900.0072
TRP 910.0052
SER 920.0062
SER 930.0075
HIS 940.0077
PRO 950.0063
PRO 960.0048
THR 970.0060
PHE 980.0106
GLY 990.0115
SER 1000.0143
GLY 1010.0249
THR 1020.0233
LYS 1030.0249
LEU 1040.0197
GLU 1050.0159
ILE 1060.0101
LYS 1070.0209
ARG 1080.0203
ALA 1090.0239
ASP 1100.0184
ALA 1110.0168
ALA 1120.0140
PRO 1130.0093
THR 1140.0107
VAL 1150.0109
SER 1160.0098
ILE 1170.0096
PHE 1180.0097
PRO 1190.0102
PRO 1200.0118
SER 1210.0144
SER 1220.0200
GLU 1230.0226
GLN 1240.0188
LEU 1250.0194
THR 1260.0266
SER 1270.0331
GLY 1280.0317
GLY 1290.0279
ALA 1300.0184
SER 1310.0111
VAL 1320.0087
VAL 1330.0097
CYS 1340.0091
PHE 1350.0086
LEU 1360.0085
ASN 1370.0077
ASN 1380.0085
PHE 1390.0087
TYR 1400.0114
PRO 1410.0122
LYS 1420.0081
ASP 1430.0063
ILE 1440.0068
ASN 1450.0144
VAL 1460.0153
LYS 1470.0146
TRP 1480.0105
LYS 1490.0071
ILE 1500.0074
ASP 1510.0172
GLY 1520.0192
SER 1530.0158
GLU 1540.0080
ARG 1550.0119
GLN 1560.0119
ASN 1570.0201
GLY 1580.0135
VAL 1590.0109
LEU 1600.0076
ASN 1610.0082
SER 1620.0068
TRP 1630.0048
THR 1640.0040
ASP 1650.0090
GLN 1660.0046
ASP 1670.0057
SER 1680.0084
LYS 1690.0134
ASP 1700.0112
SER 1710.0065
THR 1720.0068
TYR 1730.0050
SER 1740.0042
MET 1750.0049
SER 1760.0088
SER 1770.0087
THR 1780.0086
LEU 1790.0099
THR 1800.0159
LEU 1810.0181
THR 1820.0352
LYS 1830.0290
ASP 1840.0340
GLU 1850.0315
TYR 1860.0238
GLU 1870.0263
ARG 1880.0348
HIS 1890.0273
ASN 1900.0237
SER 1910.0128
TYR 1920.0053
THR 1930.0044
CYS 1940.0100
GLU 1950.0140
ALA 1960.0147
THR 1970.0158
HIS 1980.0090
LYS 1990.0083
THR 2000.0129
SER 2010.0188
THR 2020.0264
SER 2030.0269
PRO 2040.0223
ILE 2050.0155
VAL 2060.0102
LYS 2070.0061
SER 2080.0042
PHE 2090.0050
ASN 2100.0105
ARG 2110.0155
ASN 2120.0188
GLU 2130.0111
CYS 2140.0275
GLU 10.0590
VAL 20.0313
GLN 30.0251
LEU 40.0097
VAL 50.0096
GLU 60.0091
SER 70.0116
GLY 80.0132
GLY 90.0143
GLY 100.0175
LEU 110.0181
VAL 120.0161
LYS 130.0164
PRO 140.0138
GLY 150.0118
GLY 160.0149
SER 170.0131
LEU 180.0121
LYS 190.0108
LEU 200.0087
SER 210.0068
CYS 220.0047
ALA 230.0089
ALA 240.0151
SER 250.0277
GLY 260.0355
PHE 270.0308
ILE 280.0260
PHE 290.0201
SER 300.0190
ASP 310.0114
TYR 320.0095
TYR 330.0068
MET 340.0047
TYR 350.0045
TRP 360.0053
VAL 370.0040
ARG 380.0046
GLN 390.0075
THR 400.0089
PRO 410.0135
GLU 420.0166
LYS 430.0163
ARG 440.0126
LEU 450.0088
GLU 460.0018
TRP 470.0011
VAL 480.0037
ALA 490.0054
THR 500.0053
ILE 510.0051
SER 520.0055
ASP 520.0068
GLY 530.0073
ASN 540.0072
SER 550.0055
TYR 560.0029
THR 570.0049
TYR 580.0060
TYR 590.0059
VAL 600.0057
ASP 610.0080
SER 620.0054
VAL 630.0058
LYS 640.0086
GLY 650.0107
ARG 660.0094
PHE 670.0073
THR 680.0073
ILE 690.0056
SER 700.0072
ARG 710.0096
ASP 720.0144
ASN 730.0200
ALA 740.0258
LYS 750.0226
ASN 760.0189
ASN 770.0112
LEU 780.0057
TYR 790.0054
LEU 800.0063
GLN 810.0086
MET 820.0092
SER 820.0115
SER 820.0110
LEU 820.0096
LYS 830.0086
SER 840.0110
GLU 850.0073
ASP 860.0069
THR 870.0103
ALA 880.0096
ILE 890.0098
TYR 900.0078
TYR 910.0031
CYS 920.0042
ALA 930.0031
ARG 940.0063
ASP 950.0058
GLY 960.0082
PRO 970.0075
THR 980.0068
ASP 990.0105
SER 1000.0061
SER 1000.0053
GLY 1000.0050
TYR 1000.0055
GLY 1000.0052
GLY 1000.0056
PHE 1000.0054
GLY 1010.0057
TYR 1020.0057
TRP 1030.0044
GLY 1040.0066
GLN 1050.0082
GLY 1060.0125
THR 1070.0123
LEU 1080.0143
VAL 1090.0145
THR 1100.0163
VAL 1110.0154
SER 1120.0195
GLU 1130.0216
ALA 1140.0237
LYS 1150.0228
THR 1160.0223
THR 1170.0225
PRO 1180.0190
PRO 1190.0116
SER 1200.0059
VAL 1210.0068
TYR 1220.0083
PRO 1230.0120
LEU 1240.0088
ALA 1250.0085
PRO 1260.0094
GLY 1270.0150
SER 1280.0247
ALA 1290.0376
ALA 1300.0242
GLN 1330.0353
THR 1340.0176
ASN 1350.0207
SER 1360.0238
MET 1370.0209
VAL 1380.0105
THR 1390.0063
LEU 1400.0055
GLY 1410.0082
CYS 1420.0081
LEU 1430.0047
VAL 1440.0035
LYS 1450.0059
GLY 1460.0130
TYR 1470.0162
PHE 1480.0234
PRO 1490.0246
GLU 1500.0249
PRO 1510.0241
VAL 1520.0182
THR 1530.0176
VAL 1540.0099
THR 1560.0099
TRP 1570.0076
ASN 1620.0061
SER 1630.0111
GLY 1640.0123
SER 1650.0073
LEU 1660.0066
SER 1670.0117
SER 1680.0125
GLY 1690.0121
VAL 1710.0055
HIS 1720.0055
THR 1730.0055
PHE 1740.0088
PRO 1750.0132
ALA 1760.0147
VAL 1770.0220
LEU 1780.0309
GLN 1790.0350
SER 1800.0530
ASP 1830.0353
LEU 1840.0264
TYR 1850.0212
THR 1860.0087
LEU 1870.0067
SER 1880.0059
SER 1890.0074
SER 1900.0061
VAL 1910.0044
THR 1920.0172
VAL 1930.0232
PRO 1940.0324
SER 1950.0301
SER 1960.0503
PRO 1980.0388
ARG 1990.0280
PRO 2000.0294
SER 2020.0514
GLU 2030.0374
THR 2040.0132
VAL 2050.0015
THR 2060.0056
CYS 2080.0088
ASN 2090.0089
VAL 2100.0077
ALA 2110.0149
HIS 2120.0174
PRO 2130.0213
ALA 2140.0253
SER 2150.0233
SER 2160.0212
THR 2170.0114
LYS 2180.0086
VAL 2190.0056
ASP 2200.0090
LYS 2210.0074
LYS 2220.0048
ILE 2230.0051
VAL 2260.0128
PRO 2270.0048
ARG 2280.0078
ASP 2320.0308
CYS 2330.0602

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.