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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0857
ILE 4790.0188
PHE 4800.0131
ILE 4810.0153
SER 4820.0232
ASP 4830.0305
ASP 4840.0340
LYS 4850.0187
ASP 4860.0215
SER 4870.0204
LEU 4880.0159
LYS 4890.0149
CYS 4900.0133
PRO 4910.0126
CYS 4920.0129
ASP 4930.0132
PRO 4940.0153
GLU 4950.0160
MET 4960.0188
VAL 4970.0212
SER 4980.0230
GLN 4990.0514
SER 5000.0340
THR 5010.0335
CYS 5020.0396
ARG 5030.0240
PHE 5040.0204
PHE 5050.0147
VAL 5060.0113
CYS 5070.0120
LYS 5080.0109
CYS 5090.0128
VAL 5100.0143
GLU 5110.0152
ARG 5120.0333
SER 20.0173
VAL 30.0171
LEU 40.0128
SER 50.0136
GLN 60.0133
SER 70.0189
PRO 80.0260
ALA 90.0275
ILE 100.0256
LEU 110.0228
SER 120.0204
ALA 130.0166
SER 140.0149
PRO 150.0095
GLY 160.0089
GLU 170.0160
LYS 180.0177
VAL 190.0198
THR 200.0165
MET 210.0148
THR 220.0142
CYS 230.0102
ARG 240.0100
ALA 250.0106
ARG 260.0231
SER 270.0168
SER 290.0126
VAL 300.0120
SER 310.0107
TYR 320.0077
MET 330.0077
HIS 340.0081
TRP 350.0053
TYR 360.0075
GLN 370.0084
GLN 380.0087
LYS 390.0079
SER 400.0053
GLY 410.0050
SER 420.0049
SER 430.0063
PRO 440.0070
LYS 450.0079
PRO 460.0078
TRP 470.0078
ILE 480.0064
HIS 490.0065
ALA 500.0077
THR 510.0040
SER 520.0027
ASN 530.0070
LEU 540.0077
ALA 550.0093
SER 560.0174
GLY 570.0169
VAL 580.0102
PRO 590.0058
ALA 600.0099
ARG 610.0086
PHE 620.0048
SER 630.0058
GLY 640.0045
SER 650.0052
GLY 660.0041
SER 670.0030
GLY 680.0049
THR 690.0059
SER 700.0065
TYR 710.0056
SER 720.0073
LEU 730.0061
THR 740.0128
ILE 750.0113
SER 760.0150
ARG 770.0111
VAL 780.0096
GLU 790.0067
ALA 800.0089
GLU 810.0108
ASP 820.0111
ALA 830.0137
ALA 840.0128
THR 850.0127
TYR 860.0077
TYR 870.0079
CYS 880.0077
GLN 890.0113
GLN 900.0116
TRP 910.0115
SER 920.0130
SER 930.0154
HIS 940.0147
PRO 950.0134
PRO 960.0131
THR 970.0130
PHE 980.0097
GLY 990.0087
SER 1000.0098
GLY 1010.0153
THR 1020.0153
LYS 1030.0167
LEU 1040.0191
GLU 1050.0180
ILE 1060.0138
LYS 1070.0203
ARG 1080.0205
ALA 1090.0199
ASP 1100.0300
ALA 1110.0278
ALA 1120.0246
PRO 1130.0176
THR 1140.0148
VAL 1150.0104
SER 1160.0031
ILE 1170.0037
PHE 1180.0062
PRO 1190.0063
PRO 1200.0086
SER 1210.0127
SER 1220.0178
GLU 1230.0211
GLN 1240.0179
LEU 1250.0118
THR 1260.0203
SER 1270.0242
GLY 1280.0135
GLY 1290.0152
ALA 1300.0081
SER 1310.0065
VAL 1320.0056
VAL 1330.0057
CYS 1340.0038
PHE 1350.0047
LEU 1360.0084
ASN 1370.0137
ASN 1380.0200
PHE 1390.0221
TYR 1400.0257
PRO 1410.0251
LYS 1420.0244
ASP 1430.0233
ILE 1440.0147
ASN 1450.0082
VAL 1460.0086
LYS 1470.0114
TRP 1480.0112
LYS 1490.0111
ILE 1500.0025
ASP 1510.0080
GLY 1520.0128
SER 1530.0189
GLU 1540.0177
ARG 1550.0168
GLN 1560.0152
ASN 1570.0197
GLY 1580.0096
VAL 1590.0059
LEU 1600.0045
ASN 1610.0069
SER 1620.0081
TRP 1630.0116
THR 1640.0155
ASP 1650.0203
GLN 1660.0223
ASP 1670.0253
SER 1680.0241
LYS 1690.0253
ASP 1700.0257
SER 1710.0236
THR 1720.0234
TYR 1730.0194
SER 1740.0152
MET 1750.0103
SER 1760.0036
SER 1770.0037
THR 1780.0049
LEU 1790.0057
THR 1800.0081
LEU 1810.0109
THR 1820.0221
LYS 1830.0164
ASP 1840.0259
GLU 1850.0235
TYR 1860.0164
GLU 1870.0221
ARG 1880.0296
HIS 1890.0205
ASN 1900.0202
SER 1910.0105
TYR 1920.0070
THR 1930.0104
CYS 1940.0103
GLU 1950.0121
ALA 1960.0100
THR 1970.0112
HIS 1980.0169
LYS 1990.0244
THR 2000.0307
SER 2010.0277
THR 2020.0253
SER 2030.0255
PRO 2040.0188
ILE 2050.0198
VAL 2060.0131
LYS 2070.0102
SER 2080.0069
PHE 2090.0133
ASN 2100.0155
ARG 2110.0156
ASN 2120.0187
GLU 2130.0081
CYS 2140.0195
GLU 10.0220
VAL 20.0120
GLN 30.0173
LEU 40.0119
VAL 50.0154
GLU 60.0139
SER 70.0151
GLY 80.0141
GLY 90.0129
GLY 100.0086
LEU 110.0105
VAL 120.0112
LYS 130.0173
PRO 140.0194
GLY 150.0154
GLY 160.0121
SER 170.0109
LEU 180.0111
LYS 190.0136
LEU 200.0136
SER 210.0144
CYS 220.0141
ALA 230.0167
ALA 240.0137
SER 250.0167
GLY 260.0148
PHE 270.0069
ILE 280.0072
PHE 290.0074
SER 300.0101
ASP 310.0094
TYR 320.0080
TYR 330.0086
MET 340.0052
TYR 350.0067
TRP 360.0081
VAL 370.0083
ARG 380.0077
GLN 390.0083
THR 400.0108
PRO 410.0161
GLU 420.0187
LYS 430.0127
ARG 440.0120
LEU 450.0085
GLU 460.0097
TRP 470.0089
VAL 480.0077
ALA 490.0073
THR 500.0074
ILE 510.0060
SER 520.0083
ASP 520.0086
GLY 530.0086
ASN 540.0084
SER 550.0055
TYR 560.0064
THR 570.0073
TYR 580.0076
TYR 590.0066
VAL 600.0076
ASP 610.0060
SER 620.0053
VAL 630.0051
LYS 640.0097
GLY 650.0124
ARG 660.0116
PHE 670.0076
THR 680.0079
ILE 690.0064
SER 700.0078
ARG 710.0103
ASP 720.0181
ASN 730.0178
ALA 740.0256
LYS 750.0253
ASN 760.0162
ASN 770.0156
LEU 780.0109
TYR 790.0113
LEU 800.0095
GLN 810.0105
MET 820.0102
SER 820.0109
SER 820.0133
LEU 820.0130
LYS 830.0154
SER 840.0152
GLU 850.0118
ASP 860.0100
THR 870.0084
ALA 880.0091
ILE 890.0105
TYR 900.0104
TYR 910.0096
CYS 920.0080
ALA 930.0080
ARG 940.0082
ASP 950.0098
GLY 960.0106
PRO 970.0099
THR 980.0123
ASP 990.0145
SER 1000.0098
SER 1000.0097
GLY 1000.0105
TYR 1000.0119
GLY 1000.0115
GLY 1000.0110
PHE 1000.0097
GLY 1010.0088
TYR 1020.0077
TRP 1030.0072
GLY 1040.0080
GLN 1050.0120
GLY 1060.0148
THR 1070.0127
LEU 1080.0108
VAL 1090.0103
THR 1100.0098
VAL 1110.0122
SER 1120.0203
GLU 1130.0258
ALA 1140.0243
LYS 1150.0225
THR 1160.0211
THR 1170.0175
PRO 1180.0165
PRO 1190.0072
SER 1200.0065
VAL 1210.0085
TYR 1220.0095
PRO 1230.0081
LEU 1240.0104
ALA 1250.0096
PRO 1260.0076
GLY 1270.0108
SER 1280.0130
ALA 1290.0134
ALA 1300.0133
GLN 1330.0223
THR 1340.0188
ASN 1350.0205
SER 1360.0072
MET 1370.0074
VAL 1380.0060
THR 1390.0043
LEU 1400.0067
GLY 1410.0086
CYS 1420.0090
LEU 1430.0093
VAL 1440.0068
LYS 1450.0045
GLY 1460.0036
TYR 1470.0091
PHE 1480.0162
PRO 1490.0181
GLU 1500.0187
PRO 1510.0258
VAL 1520.0190
THR 1530.0187
VAL 1540.0093
THR 1560.0113
TRP 1570.0132
ASN 1620.0166
SER 1630.0179
GLY 1640.0182
SER 1650.0219
LEU 1660.0158
SER 1670.0138
SER 1680.0091
GLY 1690.0067
VAL 1710.0067
HIS 1720.0070
THR 1730.0095
PHE 1740.0069
PRO 1750.0081
ALA 1760.0113
VAL 1770.0103
LEU 1780.0121
GLN 1790.0108
SER 1800.0098
ASP 1830.0112
LEU 1840.0094
TYR 1850.0091
THR 1860.0083
LEU 1870.0081
SER 1880.0085
SER 1890.0077
SER 1900.0052
VAL 1910.0053
THR 1920.0073
VAL 1930.0070
PRO 1940.0102
SER 1950.0110
SER 1960.0211
PRO 1980.0121
ARG 1990.0116
PRO 2000.0149
SER 2020.0191
GLU 2030.0069
THR 2040.0101
VAL 2050.0119
THR 2060.0129
CYS 2080.0120
ASN 2090.0081
VAL 2100.0081
ALA 2110.0169
HIS 2120.0202
PRO 2130.0313
ALA 2140.0328
SER 2150.0303
SER 2160.0336
THR 2170.0216
LYS 2180.0155
VAL 2190.0069
ASP 2200.0087
LYS 2210.0100
LYS 2220.0100
ILE 2230.0131
VAL 2260.0190
PRO 2270.0198
ARG 2280.0231
ASP 2320.0552
CYS 2330.0857

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.