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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0607
ILE 4790.0091
PHE 4800.0094
ILE 4810.0079
SER 4820.0055
ASP 4830.0039
ASP 4840.0038
LYS 4850.0055
ASP 4860.0075
SER 4870.0053
LEU 4880.0067
LYS 4890.0086
CYS 4900.0081
PRO 4910.0065
CYS 4920.0075
ASP 4930.0072
PRO 4940.0064
GLU 4950.0071
MET 4960.0072
VAL 4970.0150
SER 4980.0132
GLN 4990.0217
SER 5000.0144
THR 5010.0198
CYS 5020.0157
ARG 5030.0030
PHE 5040.0043
PHE 5050.0057
VAL 5060.0067
CYS 5070.0067
LYS 5080.0053
CYS 5090.0051
VAL 5100.0078
GLU 5110.0099
ARG 5120.0186
SER 20.0110
VAL 30.0123
LEU 40.0103
SER 50.0145
GLN 60.0143
SER 70.0140
PRO 80.0173
ALA 90.0147
ILE 100.0122
LEU 110.0169
SER 120.0158
ALA 130.0187
SER 140.0267
PRO 150.0215
GLY 160.0261
GLU 170.0275
LYS 180.0286
VAL 190.0278
THR 200.0199
MET 210.0172
THR 220.0187
CYS 230.0147
ARG 240.0142
ALA 250.0147
ARG 260.0208
SER 270.0168
SER 290.0151
VAL 300.0120
SER 310.0112
TYR 320.0066
MET 330.0074
HIS 340.0087
TRP 350.0109
TYR 360.0099
GLN 370.0083
GLN 380.0110
LYS 390.0135
SER 400.0194
GLY 410.0210
SER 420.0141
SER 430.0113
PRO 440.0104
LYS 450.0094
PRO 460.0099
TRP 470.0129
ILE 480.0115
HIS 490.0101
ALA 500.0126
THR 510.0117
SER 520.0152
ASN 530.0163
LEU 540.0200
ALA 550.0200
SER 560.0276
GLY 570.0290
VAL 580.0243
PRO 590.0217
ALA 600.0281
ARG 610.0244
PHE 620.0213
SER 630.0219
GLY 640.0183
SER 650.0159
GLY 660.0137
SER 670.0126
GLY 680.0122
THR 690.0132
SER 700.0133
TYR 710.0139
SER 720.0150
LEU 730.0160
THR 740.0250
ILE 750.0222
SER 760.0268
ARG 770.0241
VAL 780.0164
GLU 790.0100
ALA 800.0146
GLU 810.0082
ASP 820.0021
ALA 830.0028
ALA 840.0065
THR 850.0100
TYR 860.0096
TYR 870.0106
CYS 880.0117
GLN 890.0050
GLN 900.0023
TRP 910.0022
SER 920.0040
SER 930.0064
HIS 940.0071
PRO 950.0062
PRO 960.0034
THR 970.0041
PHE 980.0093
GLY 990.0104
SER 1000.0104
GLY 1010.0141
THR 1020.0122
LYS 1030.0094
LEU 1040.0078
GLU 1050.0043
ILE 1060.0106
LYS 1070.0201
ARG 1080.0277
ALA 1090.0379
ASP 1100.0196
ALA 1110.0166
ALA 1120.0105
PRO 1130.0058
THR 1140.0063
VAL 1150.0072
SER 1160.0098
ILE 1170.0109
PHE 1180.0115
PRO 1190.0145
PRO 1200.0142
SER 1210.0109
SER 1220.0107
GLU 1230.0124
GLN 1240.0146
LEU 1250.0227
THR 1260.0272
SER 1270.0308
GLY 1280.0288
GLY 1290.0238
ALA 1300.0169
SER 1310.0140
VAL 1320.0128
VAL 1330.0132
CYS 1340.0109
PHE 1350.0109
LEU 1360.0117
ASN 1370.0107
ASN 1380.0105
PHE 1390.0080
TYR 1400.0111
PRO 1410.0084
LYS 1420.0015
ASP 1430.0052
ILE 1440.0068
ASN 1450.0119
VAL 1460.0145
LYS 1470.0103
TRP 1480.0080
LYS 1490.0069
ILE 1500.0079
ASP 1510.0176
GLY 1520.0275
SER 1530.0221
GLU 1540.0234
ARG 1550.0191
GLN 1560.0166
ASN 1570.0225
GLY 1580.0178
VAL 1590.0170
LEU 1600.0184
ASN 1610.0154
SER 1620.0147
TRP 1630.0133
THR 1640.0174
ASP 1650.0157
GLN 1660.0124
ASP 1670.0247
SER 1680.0275
LYS 1690.0442
ASP 1700.0341
SER 1710.0216
THR 1720.0169
TYR 1730.0091
SER 1740.0120
MET 1750.0137
SER 1760.0136
SER 1770.0141
THR 1780.0154
LEU 1790.0140
THR 1800.0145
LEU 1810.0108
THR 1820.0148
LYS 1830.0196
ASP 1840.0165
GLU 1850.0095
TYR 1860.0125
GLU 1870.0206
ARG 1880.0211
HIS 1890.0189
ASN 1900.0229
SER 1910.0158
TYR 1920.0088
THR 1930.0034
CYS 1940.0087
GLU 1950.0084
ALA 1960.0116
THR 1970.0125
HIS 1980.0076
LYS 1990.0110
THR 2000.0085
SER 2010.0113
THR 2020.0222
SER 2030.0193
PRO 2040.0149
ILE 2050.0126
VAL 2060.0096
LYS 2070.0097
SER 2080.0082
PHE 2090.0111
ASN 2100.0173
ARG 2110.0238
ASN 2120.0318
GLU 2130.0265
CYS 2140.0356
GLU 10.0580
VAL 20.0313
GLN 30.0216
LEU 40.0062
VAL 50.0032
GLU 60.0037
SER 70.0075
GLY 80.0088
GLY 90.0075
GLY 100.0052
LEU 110.0050
VAL 120.0080
LYS 130.0101
PRO 140.0098
GLY 150.0087
GLY 160.0066
SER 170.0057
LEU 180.0066
LYS 190.0084
LEU 200.0049
SER 210.0057
CYS 220.0033
ALA 230.0074
ALA 240.0140
SER 250.0260
GLY 260.0348
PHE 270.0324
ILE 280.0283
PHE 290.0228
SER 300.0227
ASP 310.0162
TYR 320.0140
TYR 330.0110
MET 340.0083
TYR 350.0072
TRP 360.0055
VAL 370.0065
ARG 380.0079
GLN 390.0127
THR 400.0202
PRO 410.0284
GLU 420.0350
LYS 430.0234
ARG 440.0221
LEU 450.0147
GLU 460.0109
TRP 470.0089
VAL 480.0079
ALA 490.0090
THR 500.0107
ILE 510.0112
SER 520.0132
ASP 520.0128
GLY 530.0122
ASN 540.0125
SER 550.0145
TYR 560.0135
THR 570.0134
TYR 580.0134
TYR 590.0129
VAL 600.0130
ASP 610.0250
SER 620.0217
VAL 630.0153
LYS 640.0186
GLY 650.0177
ARG 660.0116
PHE 670.0079
THR 680.0100
ILE 690.0094
SER 700.0102
ARG 710.0140
ASP 720.0174
ASN 730.0234
ALA 740.0282
LYS 750.0240
ASN 760.0202
ASN 770.0137
LEU 780.0092
TYR 790.0086
LEU 800.0060
GLN 810.0071
MET 820.0047
SER 820.0046
SER 820.0023
LEU 820.0035
LYS 830.0088
SER 840.0125
GLU 850.0153
ASP 860.0098
THR 870.0108
ALA 880.0105
ILE 890.0095
TYR 900.0048
TYR 910.0048
CYS 920.0035
ALA 930.0056
ARG 940.0075
ASP 950.0065
GLY 960.0093
PRO 970.0024
THR 980.0025
ASP 990.0026
SER 1000.0030
SER 1000.0032
GLY 1000.0039
TYR 1000.0038
GLY 1000.0032
GLY 1000.0033
PHE 1000.0039
GLY 1010.0042
TYR 1020.0057
TRP 1030.0058
GLY 1040.0052
GLN 1050.0054
GLY 1060.0068
THR 1070.0069
LEU 1080.0072
VAL 1090.0067
THR 1100.0077
VAL 1110.0083
SER 1120.0089
GLU 1130.0101
ALA 1140.0013
LYS 1150.0054
THR 1160.0111
THR 1170.0131
PRO 1180.0172
PRO 1190.0078
SER 1200.0083
VAL 1210.0107
TYR 1220.0111
PRO 1230.0109
LEU 1240.0100
ALA 1250.0106
PRO 1260.0119
GLY 1270.0190
SER 1280.0225
ALA 1290.0295
ALA 1300.0200
GLN 1330.0138
THR 1340.0319
ASN 1350.0418
SER 1360.0388
MET 1370.0254
VAL 1380.0146
THR 1390.0084
LEU 1400.0085
GLY 1410.0109
CYS 1420.0092
LEU 1430.0084
VAL 1440.0041
LYS 1450.0029
GLY 1460.0021
TYR 1470.0075
PHE 1480.0115
PRO 1490.0140
GLU 1500.0167
PRO 1510.0257
VAL 1520.0178
THR 1530.0156
VAL 1540.0026
THR 1560.0081
TRP 1570.0123
ASN 1620.0197
SER 1630.0229
GLY 1640.0252
SER 1650.0268
LEU 1660.0224
SER 1670.0242
SER 1680.0278
GLY 1690.0221
VAL 1710.0090
HIS 1720.0083
THR 1730.0055
PHE 1740.0100
PRO 1750.0099
ALA 1760.0099
VAL 1770.0093
LEU 1780.0108
GLN 1790.0096
SER 1800.0148
ASP 1830.0096
LEU 1840.0080
TYR 1850.0079
THR 1860.0052
LEU 1870.0056
SER 1880.0072
SER 1890.0051
SER 1900.0072
VAL 1910.0104
THR 1920.0159
VAL 1930.0142
PRO 1940.0227
SER 1950.0237
SER 1960.0302
PRO 1980.0259
ARG 1990.0160
PRO 2000.0160
SER 2020.0356
GLU 2030.0287
THR 2040.0081
VAL 2050.0113
THR 2060.0128
CYS 2080.0113
ASN 2090.0092
VAL 2100.0071
ALA 2110.0184
HIS 2120.0216
PRO 2130.0360
ALA 2140.0361
SER 2150.0356
SER 2160.0413
THR 2170.0280
LYS 2180.0203
VAL 2190.0171
ASP 2200.0118
LYS 2210.0115
LYS 2220.0118
ILE 2230.0100
VAL 2260.0071
PRO 2270.0088
ARG 2280.0101
ASP 2320.0232
CYS 2330.0607

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.