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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 30  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1395
ILE 4790.0084
PHE 4800.0083
ILE 4810.0088
SER 4820.0103
ASP 4830.0120
ASP 4840.0139
LYS 4850.0136
ASP 4860.0127
SER 4870.0123
LEU 4880.0093
LYS 4890.0073
CYS 4900.0059
PRO 4910.0028
CYS 4920.0037
ASP 4930.0052
PRO 4940.0116
GLU 4950.0140
MET 4960.0163
VAL 4970.0243
SER 4980.0199
GLN 4990.0392
SER 5000.0195
THR 5010.0342
CYS 5020.0332
ARG 5030.0105
PHE 5040.0077
PHE 5050.0123
VAL 5060.0098
CYS 5070.0072
LYS 5080.0071
CYS 5090.0069
VAL 5100.0082
GLU 5110.0067
ARG 5120.0191
SER 20.0173
VAL 30.0178
LEU 40.0138
SER 50.0113
GLN 60.0124
SER 70.0162
PRO 80.0094
ALA 90.0133
ILE 100.0122
LEU 110.0115
SER 120.0095
ALA 130.0075
SER 140.0128
PRO 150.0120
GLY 160.0147
GLU 170.0108
LYS 180.0086
VAL 190.0059
THR 200.0125
MET 210.0127
THR 220.0121
CYS 230.0149
ARG 240.0166
ALA 250.0165
ARG 260.0404
SER 270.0279
SER 290.0205
VAL 300.0148
SER 310.0119
TYR 320.0054
MET 330.0045
HIS 340.0054
TRP 350.0095
TYR 360.0105
GLN 370.0128
GLN 380.0122
LYS 390.0129
SER 400.0138
GLY 410.0135
SER 420.0127
SER 430.0094
PRO 440.0109
LYS 450.0109
PRO 460.0098
TRP 470.0112
ILE 480.0091
HIS 490.0070
ALA 500.0059
THR 510.0061
SER 520.0071
ASN 530.0096
LEU 540.0128
ALA 550.0144
SER 560.0244
GLY 570.0252
VAL 580.0184
PRO 590.0163
ALA 600.0179
ARG 610.0155
PHE 620.0128
SER 630.0126
GLY 640.0125
SER 650.0085
GLY 660.0077
SER 670.0073
GLY 680.0116
THR 690.0158
SER 700.0136
TYR 710.0103
SER 720.0119
LEU 730.0126
THR 740.0134
ILE 750.0121
SER 760.0130
ARG 770.0137
VAL 780.0071
GLU 790.0069
ALA 800.0042
GLU 810.0057
ASP 820.0075
ALA 830.0082
ALA 840.0108
THR 850.0130
TYR 860.0115
TYR 870.0104
CYS 880.0087
GLN 890.0041
GLN 900.0018
TRP 910.0042
SER 920.0093
SER 930.0104
HIS 940.0071
PRO 950.0087
PRO 960.0042
THR 970.0028
PHE 980.0063
GLY 990.0094
SER 1000.0104
GLY 1010.0148
THR 1020.0122
LYS 1030.0113
LEU 1040.0101
GLU 1050.0097
ILE 1060.0082
LYS 1070.0194
ARG 1080.0194
ALA 1090.0200
ASP 1100.0185
ALA 1110.0200
ALA 1120.0179
PRO 1130.0159
THR 1140.0140
VAL 1150.0110
SER 1160.0072
ILE 1170.0062
PHE 1180.0053
PRO 1190.0049
PRO 1200.0048
SER 1210.0068
SER 1220.0120
GLU 1230.0138
GLN 1240.0109
LEU 1250.0056
THR 1260.0114
SER 1270.0104
GLY 1280.0019
GLY 1290.0053
ALA 1300.0041
SER 1310.0038
VAL 1320.0032
VAL 1330.0048
CYS 1340.0068
PHE 1350.0085
LEU 1360.0118
ASN 1370.0152
ASN 1380.0186
PHE 1390.0189
TYR 1400.0195
PRO 1410.0195
LYS 1420.0194
ASP 1430.0152
ILE 1440.0121
ASN 1450.0107
VAL 1460.0079
LYS 1470.0075
TRP 1480.0071
LYS 1490.0074
ILE 1500.0056
ASP 1510.0059
GLY 1520.0090
SER 1530.0113
GLU 1540.0112
ARG 1550.0114
GLN 1560.0130
ASN 1570.0172
GLY 1580.0093
VAL 1590.0080
LEU 1600.0071
ASN 1610.0078
SER 1620.0089
TRP 1630.0127
THR 1640.0145
ASP 1650.0140
GLN 1660.0144
ASP 1670.0149
SER 1680.0095
LYS 1690.0102
ASP 1700.0160
SER 1710.0161
THR 1720.0183
TYR 1730.0173
SER 1740.0152
MET 1750.0132
SER 1760.0088
SER 1770.0070
THR 1780.0051
LEU 1790.0081
THR 1800.0089
LEU 1810.0093
THR 1820.0140
LYS 1830.0113
ASP 1840.0177
GLU 1850.0139
TYR 1860.0089
GLU 1870.0113
ARG 1880.0136
HIS 1890.0069
ASN 1900.0095
SER 1910.0058
TYR 1920.0041
THR 1930.0058
CYS 1940.0072
GLU 1950.0058
ALA 1960.0064
THR 1970.0078
HIS 1980.0059
LYS 1990.0094
THR 2000.0220
SER 2010.0482
THR 2020.0748
SER 2030.0374
PRO 2040.0177
ILE 2050.0222
VAL 2060.0090
LYS 2070.0089
SER 2080.0073
PHE 2090.0053
ASN 2100.0080
ARG 2110.0091
ASN 2120.0255
GLU 2130.0143
CYS 2140.0264
GLU 10.0310
VAL 20.0157
GLN 30.0169
LEU 40.0111
VAL 50.0122
GLU 60.0123
SER 70.0086
GLY 80.0080
GLY 90.0063
GLY 100.0099
LEU 110.0141
VAL 120.0184
LYS 130.0288
PRO 140.0167
GLY 150.0194
GLY 160.0215
SER 170.0193
LEU 180.0154
LYS 190.0104
LEU 200.0088
SER 210.0088
CYS 220.0111
ALA 230.0095
ALA 240.0077
SER 250.0077
GLY 260.0136
PHE 270.0110
ILE 280.0085
PHE 290.0039
SER 300.0047
ASP 310.0055
TYR 320.0036
TYR 330.0020
MET 340.0051
TYR 350.0073
TRP 360.0097
VAL 370.0097
ARG 380.0085
GLN 390.0082
THR 400.0086
PRO 410.0087
GLU 420.0102
LYS 430.0087
ARG 440.0088
LEU 450.0089
GLU 460.0089
TRP 470.0098
VAL 480.0095
ALA 490.0102
THR 500.0073
ILE 510.0055
SER 520.0023
ASP 520.0050
GLY 530.0098
ASN 540.0111
SER 550.0080
TYR 560.0070
THR 570.0092
TYR 580.0093
TYR 590.0139
VAL 600.0178
ASP 610.0308
SER 620.0276
VAL 630.0225
LYS 640.0273
GLY 650.0284
ARG 660.0229
PHE 670.0159
THR 680.0141
ILE 690.0106
SER 700.0077
ARG 710.0060
ASP 720.0072
ASN 730.0048
ALA 740.0074
LYS 750.0064
ASN 760.0035
ASN 770.0071
LEU 780.0090
TYR 790.0112
LEU 800.0112
GLN 810.0126
MET 820.0172
SER 820.0205
SER 820.0181
LEU 820.0100
LYS 830.0063
SER 840.0051
GLU 850.0103
ASP 860.0082
THR 870.0060
ALA 880.0069
ILE 890.0075
TYR 900.0084
TYR 910.0074
CYS 920.0084
ALA 930.0083
ARG 940.0045
ASP 950.0036
GLY 960.0049
PRO 970.0058
THR 980.0053
ASP 990.0050
SER 1000.0052
SER 1000.0048
GLY 1000.0059
TYR 1000.0049
GLY 1000.0039
GLY 1000.0032
PHE 1000.0040
GLY 1010.0035
TYR 1020.0050
TRP 1030.0076
GLY 1040.0094
GLN 1050.0097
GLY 1060.0091
THR 1070.0068
LEU 1080.0036
VAL 1090.0038
THR 1100.0069
VAL 1110.0105
SER 1120.0245
GLU 1130.0370
ALA 1140.0293
LYS 1150.0263
THR 1160.0165
THR 1170.0151
PRO 1180.0101
PRO 1190.0098
SER 1200.0123
VAL 1210.0103
TYR 1220.0090
PRO 1230.0081
LEU 1240.0070
ALA 1250.0068
PRO 1260.0065
GLY 1270.0070
SER 1280.0067
ALA 1290.0252
ALA 1300.0193
GLN 1330.0332
THR 1340.0311
ASN 1350.0218
SER 1360.0260
MET 1370.0207
VAL 1380.0172
THR 1390.0108
LEU 1400.0092
GLY 1410.0080
CYS 1420.0089
LEU 1430.0090
VAL 1440.0085
LYS 1450.0102
GLY 1460.0100
TYR 1470.0086
PHE 1480.0111
PRO 1490.0082
GLU 1500.0056
PRO 1510.0073
VAL 1520.0079
THR 1530.0077
VAL 1540.0112
THR 1560.0145
TRP 1570.0127
ASN 1620.0197
SER 1630.0230
GLY 1640.0221
SER 1650.0184
LEU 1660.0106
SER 1670.0088
SER 1680.0156
GLY 1690.0159
VAL 1710.0101
HIS 1720.0087
THR 1730.0073
PHE 1740.0059
PRO 1750.0057
ALA 1760.0049
VAL 1770.0024
LEU 1780.0044
GLN 1790.0068
SER 1800.0231
ASP 1830.0177
LEU 1840.0130
TYR 1850.0088
THR 1860.0050
LEU 1870.0049
SER 1880.0069
SER 1890.0068
SER 1900.0084
VAL 1910.0102
THR 1920.0126
VAL 1930.0149
PRO 1940.0221
SER 1950.0238
SER 1960.0213
PRO 1980.0109
ARG 1990.0056
PRO 2000.0165
SER 2020.0246
GLU 2030.0267
THR 2040.0178
VAL 2050.0134
THR 2060.0134
CYS 2080.0131
ASN 2090.0137
VAL 2100.0136
ALA 2110.0095
HIS 2120.0101
PRO 2130.0111
ALA 2140.0122
SER 2150.0154
SER 2160.0141
THR 2170.0146
LYS 2180.0134
VAL 2190.0147
ASP 2200.0141
LYS 2210.0120
LYS 2220.0128
ILE 2230.0115
VAL 2260.0121
PRO 2270.0134
ARG 2280.0140
ASP 2320.0644
CYS 2330.1395

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.