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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 32  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0719
ILE 4790.0151
PHE 4800.0138
ILE 4810.0089
SER 4820.0052
ASP 4830.0023
ASP 4840.0066
LYS 4850.0059
ASP 4860.0106
SER 4870.0110
LEU 4880.0090
LYS 4890.0091
CYS 4900.0067
PRO 4910.0062
CYS 4920.0044
ASP 4930.0040
PRO 4940.0044
GLU 4950.0048
MET 4960.0060
VAL 4970.0127
SER 4980.0124
GLN 4990.0183
SER 5000.0237
THR 5010.0254
CYS 5020.0140
ARG 5030.0027
PHE 5040.0052
PHE 5050.0060
VAL 5060.0064
CYS 5070.0069
LYS 5080.0082
CYS 5090.0103
VAL 5100.0146
GLU 5110.0165
ARG 5120.0318
SER 20.0120
VAL 30.0185
LEU 40.0160
SER 50.0217
GLN 60.0191
SER 70.0225
PRO 80.0251
ALA 90.0255
ILE 100.0230
LEU 110.0147
SER 120.0088
ALA 130.0111
SER 140.0139
PRO 150.0112
GLY 160.0123
GLU 170.0102
LYS 180.0104
VAL 190.0115
THR 200.0145
MET 210.0166
THR 220.0192
CYS 230.0181
ARG 240.0229
ALA 250.0188
ARG 260.0250
SER 270.0184
SER 290.0170
VAL 300.0114
SER 310.0120
TYR 320.0074
MET 330.0080
HIS 340.0083
TRP 350.0087
TYR 360.0097
GLN 370.0106
GLN 380.0066
LYS 390.0064
SER 400.0058
GLY 410.0120
SER 420.0094
SER 430.0080
PRO 440.0034
LYS 450.0080
PRO 460.0107
TRP 470.0115
ILE 480.0099
HIS 490.0086
ALA 500.0054
THR 510.0080
SER 520.0081
ASN 530.0089
LEU 540.0104
ALA 550.0107
SER 560.0111
GLY 570.0126
VAL 580.0130
PRO 590.0100
ALA 600.0095
ARG 610.0080
PHE 620.0104
SER 630.0095
GLY 640.0101
SER 650.0121
GLY 660.0185
SER 670.0216
GLY 680.0226
THR 690.0234
SER 700.0243
TYR 710.0154
SER 720.0157
LEU 730.0132
THR 740.0129
ILE 750.0087
SER 760.0076
ARG 770.0059
VAL 780.0032
GLU 790.0034
ALA 800.0058
GLU 810.0077
ASP 820.0061
ALA 830.0065
ALA 840.0089
THR 850.0111
TYR 860.0107
TYR 870.0098
CYS 880.0099
GLN 890.0079
GLN 900.0069
TRP 910.0061
SER 920.0091
SER 930.0090
HIS 940.0081
PRO 950.0072
PRO 960.0071
THR 970.0079
PHE 980.0079
GLY 990.0082
SER 1000.0090
GLY 1010.0169
THR 1020.0157
LYS 1030.0150
LEU 1040.0094
GLU 1050.0043
ILE 1060.0057
LYS 1070.0154
ARG 1080.0179
ALA 1090.0217
ASP 1100.0167
ALA 1110.0172
ALA 1120.0152
PRO 1130.0113
THR 1140.0112
VAL 1150.0112
SER 1160.0098
ILE 1170.0092
PHE 1180.0090
PRO 1190.0087
PRO 1200.0074
SER 1210.0082
SER 1220.0150
GLU 1230.0131
GLN 1240.0100
LEU 1250.0173
THR 1260.0248
SER 1270.0261
GLY 1280.0221
GLY 1290.0173
ALA 1300.0131
SER 1310.0076
VAL 1320.0073
VAL 1330.0089
CYS 1340.0102
PHE 1350.0105
LEU 1360.0105
ASN 1370.0115
ASN 1380.0115
PHE 1390.0106
TYR 1400.0131
PRO 1410.0123
LYS 1420.0093
ASP 1430.0093
ILE 1440.0086
ASN 1450.0082
VAL 1460.0061
LYS 1470.0052
TRP 1480.0060
LYS 1490.0091
ILE 1500.0118
ASP 1510.0129
GLY 1520.0136
SER 1530.0105
GLU 1540.0101
ARG 1550.0075
GLN 1560.0059
ASN 1570.0027
GLY 1580.0022
VAL 1590.0042
LEU 1600.0086
ASN 1610.0110
SER 1620.0109
TRP 1630.0099
THR 1640.0053
ASP 1650.0055
GLN 1660.0046
ASP 1670.0085
SER 1680.0112
LYS 1690.0174
ASP 1700.0151
SER 1710.0108
THR 1720.0102
TYR 1730.0083
SER 1740.0086
MET 1750.0092
SER 1760.0109
SER 1770.0094
THR 1780.0085
LEU 1790.0063
THR 1800.0082
LEU 1810.0119
THR 1820.0232
LYS 1830.0214
ASP 1840.0216
GLU 1850.0200
TYR 1860.0166
GLU 1870.0171
ARG 1880.0181
HIS 1890.0157
ASN 1900.0124
SER 1910.0114
TYR 1920.0106
THR 1930.0087
CYS 1940.0083
GLU 1950.0075
ALA 1960.0075
THR 1970.0088
HIS 1980.0090
LYS 1990.0093
THR 2000.0134
SER 2010.0173
THR 2020.0243
SER 2030.0192
PRO 2040.0142
ILE 2050.0128
VAL 2060.0095
LYS 2070.0088
SER 2080.0084
PHE 2090.0071
ASN 2100.0087
ARG 2110.0113
ASN 2120.0023
GLU 2130.0056
CYS 2140.0097
GLU 10.0719
VAL 20.0347
GLN 30.0271
LEU 40.0166
VAL 50.0238
GLU 60.0246
SER 70.0330
GLY 80.0329
GLY 90.0293
GLY 100.0270
LEU 110.0144
VAL 120.0098
LYS 130.0221
PRO 140.0227
GLY 150.0231
GLY 160.0150
SER 170.0143
LEU 180.0195
LYS 190.0249
LEU 200.0251
SER 210.0282
CYS 220.0241
ALA 230.0198
ALA 240.0097
SER 250.0117
GLY 260.0292
PHE 270.0301
ILE 280.0254
PHE 290.0133
SER 300.0218
ASP 310.0178
TYR 320.0101
TYR 330.0043
MET 340.0041
TYR 350.0063
TRP 360.0110
VAL 370.0080
ARG 380.0120
GLN 390.0160
THR 400.0282
PRO 410.0448
GLU 420.0482
LYS 430.0278
ARG 440.0211
LEU 450.0082
GLU 460.0108
TRP 470.0067
VAL 480.0059
ALA 490.0065
THR 500.0040
ILE 510.0047
SER 520.0069
ASP 520.0097
GLY 530.0146
ASN 540.0160
SER 550.0092
TYR 560.0101
THR 570.0091
TYR 580.0040
TYR 590.0039
VAL 600.0057
ASP 610.0067
SER 620.0115
VAL 630.0057
LYS 640.0049
GLY 650.0089
ARG 660.0061
PHE 670.0053
THR 680.0089
ILE 690.0109
SER 700.0186
ARG 710.0171
ASP 720.0235
ASN 730.0227
ALA 740.0294
LYS 750.0229
ASN 760.0107
ASN 770.0177
LEU 780.0184
TYR 790.0217
LEU 800.0161
GLN 810.0156
MET 820.0094
SER 820.0120
SER 820.0142
LEU 820.0078
LYS 830.0165
SER 840.0200
GLU 850.0228
ASP 860.0150
THR 870.0196
ALA 880.0206
ILE 890.0225
TYR 900.0179
TYR 910.0112
CYS 920.0100
ALA 930.0089
ARG 940.0047
ASP 950.0066
GLY 960.0131
PRO 970.0140
THR 980.0122
ASP 990.0113
SER 1000.0086
SER 1000.0069
GLY 1000.0055
TYR 1000.0062
GLY 1000.0062
GLY 1000.0072
PHE 1000.0075
GLY 1010.0087
TYR 1020.0096
TRP 1030.0068
GLY 1040.0116
GLN 1050.0159
GLY 1060.0254
THR 1070.0264
LEU 1080.0276
VAL 1090.0240
THR 1100.0175
VAL 1110.0073
SER 1120.0174
GLU 1130.0316
ALA 1140.0191
LYS 1150.0172
THR 1160.0089
THR 1170.0075
PRO 1180.0046
PRO 1190.0057
SER 1200.0063
VAL 1210.0052
TYR 1220.0062
PRO 1230.0097
LEU 1240.0076
ALA 1250.0079
PRO 1260.0087
GLY 1270.0058
SER 1280.0177
ALA 1290.0324
ALA 1300.0265
GLN 1330.0594
THR 1340.0468
ASN 1350.0521
SER 1360.0235
MET 1370.0216
VAL 1380.0154
THR 1390.0111
LEU 1400.0099
GLY 1410.0082
CYS 1420.0076
LEU 1430.0079
VAL 1440.0072
LYS 1450.0063
GLY 1460.0052
TYR 1470.0056
PHE 1480.0041
PRO 1490.0057
GLU 1500.0096
PRO 1510.0115
VAL 1520.0068
THR 1530.0075
VAL 1540.0085
THR 1560.0198
TRP 1570.0199
ASN 1620.0343
SER 1630.0444
GLY 1640.0458
SER 1650.0454
LEU 1660.0298
SER 1670.0351
SER 1680.0320
GLY 1690.0230
VAL 1710.0101
HIS 1720.0088
THR 1730.0080
PHE 1740.0102
PRO 1750.0111
ALA 1760.0117
VAL 1770.0135
LEU 1780.0117
GLN 1790.0102
SER 1800.0131
ASP 1830.0118
LEU 1840.0086
TYR 1850.0102
THR 1860.0083
LEU 1870.0088
SER 1880.0091
SER 1890.0078
SER 1900.0092
VAL 1910.0074
THR 1920.0180
VAL 1930.0203
PRO 1940.0244
SER 1950.0155
SER 1960.0284
PRO 1980.0210
ARG 1990.0199
PRO 2000.0223
SER 2020.0254
GLU 2030.0158
THR 2040.0239
VAL 2050.0201
THR 2060.0229
CYS 2080.0161
ASN 2090.0186
VAL 2100.0104
ALA 2110.0062
HIS 2120.0041
PRO 2130.0086
ALA 2140.0124
SER 2150.0105
SER 2160.0083
THR 2170.0067
LYS 2180.0123
VAL 2190.0176
ASP 2200.0203
LYS 2210.0162
LYS 2220.0185
ILE 2230.0161
VAL 2260.0130
PRO 2270.0134
ARG 2280.0112
ASP 2320.0076
CYS 2330.0069

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.