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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1010
ILE 4790.0283
PHE 4800.0236
ILE 4810.0222
SER 4820.0185
ASP 4830.0137
ASP 4840.0222
LYS 4850.0214
ASP 4860.0224
SER 4870.0258
LEU 4880.0233
LYS 4890.0157
CYS 4900.0099
PRO 4910.0022
CYS 4920.0032
ASP 4930.0062
PRO 4940.0154
GLU 4950.0210
MET 4960.0265
VAL 4970.0602
SER 4980.0477
GLN 4990.0737
SER 5000.0502
THR 5010.1010
CYS 5020.0653
ARG 5030.0068
PHE 5040.0117
PHE 5050.0258
VAL 5060.0206
CYS 5070.0126
LYS 5080.0066
CYS 5090.0024
VAL 5100.0034
GLU 5110.0038
ARG 5120.0093
SER 20.0207
VAL 30.0189
LEU 40.0131
SER 50.0125
GLN 60.0094
SER 70.0113
PRO 80.0038
ALA 90.0040
ILE 100.0048
LEU 110.0056
SER 120.0062
ALA 130.0056
SER 140.0089
PRO 150.0123
GLY 160.0137
GLU 170.0111
LYS 180.0107
VAL 190.0072
THR 200.0093
MET 210.0082
THR 220.0101
CYS 230.0126
ARG 240.0172
ALA 250.0202
ARG 260.0446
SER 270.0311
SER 290.0240
VAL 300.0189
SER 310.0179
TYR 320.0086
MET 330.0063
HIS 340.0060
TRP 350.0050
TYR 360.0049
GLN 370.0042
GLN 380.0045
LYS 390.0043
SER 400.0053
GLY 410.0094
SER 420.0083
SER 430.0062
PRO 440.0057
LYS 450.0068
PRO 460.0068
TRP 470.0063
ILE 480.0063
HIS 490.0070
ALA 500.0092
THR 510.0078
SER 520.0086
ASN 530.0094
LEU 540.0093
ALA 550.0093
SER 560.0147
GLY 570.0126
VAL 580.0084
PRO 590.0022
ALA 600.0044
ARG 610.0059
PHE 620.0029
SER 630.0041
GLY 640.0056
SER 650.0061
GLY 660.0080
SER 670.0117
GLY 680.0164
THR 690.0183
SER 700.0133
TYR 710.0087
SER 720.0070
LEU 730.0051
THR 740.0077
ILE 750.0066
SER 760.0106
ARG 770.0119
VAL 780.0072
GLU 790.0109
ALA 800.0094
GLU 810.0089
ASP 820.0055
ALA 830.0052
ALA 840.0048
THR 850.0052
TYR 860.0025
TYR 870.0037
CYS 880.0053
GLN 890.0047
GLN 900.0058
TRP 910.0062
SER 920.0082
SER 930.0078
HIS 940.0058
PRO 950.0075
PRO 960.0071
THR 970.0068
PHE 980.0047
GLY 990.0047
SER 1000.0039
GLY 1010.0056
THR 1020.0020
LYS 1030.0038
LEU 1040.0072
GLU 1050.0095
ILE 1060.0100
LYS 1070.0170
ARG 1080.0174
ALA 1090.0188
ASP 1100.0236
ALA 1110.0187
ALA 1120.0140
PRO 1130.0050
THR 1140.0087
VAL 1150.0092
SER 1160.0099
ILE 1170.0118
PHE 1180.0123
PRO 1190.0110
PRO 1200.0133
SER 1210.0179
SER 1220.0333
GLU 1230.0270
GLN 1240.0230
LEU 1250.0326
THR 1260.0487
SER 1270.0512
GLY 1280.0389
GLY 1290.0324
ALA 1300.0190
SER 1310.0144
VAL 1320.0118
VAL 1330.0118
CYS 1340.0112
PHE 1350.0066
LEU 1360.0044
ASN 1370.0040
ASN 1380.0089
PHE 1390.0102
TYR 1400.0170
PRO 1410.0187
LYS 1420.0166
ASP 1430.0155
ILE 1440.0073
ASN 1450.0141
VAL 1460.0169
LYS 1470.0164
TRP 1480.0142
LYS 1490.0114
ILE 1500.0067
ASP 1510.0120
GLY 1520.0088
SER 1530.0055
GLU 1540.0131
ARG 1550.0132
GLN 1560.0157
ASN 1570.0209
GLY 1580.0091
VAL 1590.0104
LEU 1600.0096
ASN 1610.0101
SER 1620.0071
TRP 1630.0065
THR 1640.0096
ASP 1650.0114
GLN 1660.0124
ASP 1670.0140
SER 1680.0127
LYS 1690.0138
ASP 1700.0132
SER 1710.0140
THR 1720.0133
TYR 1730.0099
SER 1740.0051
MET 1750.0048
SER 1760.0066
SER 1770.0091
THR 1780.0112
LEU 1790.0126
THR 1800.0169
LEU 1810.0166
THR 1820.0325
LYS 1830.0196
ASP 1840.0175
GLU 1850.0234
TYR 1860.0119
GLU 1870.0100
ARG 1880.0270
HIS 1890.0231
ASN 1900.0210
SER 1910.0100
TYR 1920.0063
THR 1930.0119
CYS 1940.0161
GLU 1950.0177
ALA 1960.0160
THR 1970.0127
HIS 1980.0051
LYS 1990.0139
THR 2000.0173
SER 2010.0156
THR 2020.0109
SER 2030.0227
PRO 2040.0224
ILE 2050.0192
VAL 2060.0171
LYS 2070.0132
SER 2080.0121
PHE 2090.0136
ASN 2100.0149
ARG 2110.0152
ASN 2120.0289
GLU 2130.0266
CYS 2140.0313
GLU 10.0217
VAL 20.0126
GLN 30.0098
LEU 40.0055
VAL 50.0060
GLU 60.0055
SER 70.0052
GLY 80.0060
GLY 90.0052
GLY 100.0078
LEU 110.0108
VAL 120.0158
LYS 130.0257
PRO 140.0195
GLY 150.0182
GLY 160.0168
SER 170.0138
LEU 180.0111
LYS 190.0051
LEU 200.0036
SER 210.0027
CYS 220.0036
ALA 230.0025
ALA 240.0022
SER 250.0038
GLY 260.0087
PHE 270.0091
ILE 280.0096
PHE 290.0070
SER 300.0095
ASP 310.0082
TYR 320.0060
TYR 330.0052
MET 340.0010
TYR 350.0012
TRP 360.0018
VAL 370.0029
ARG 380.0027
GLN 390.0032
THR 400.0041
PRO 410.0077
GLU 420.0090
LYS 430.0057
ARG 440.0047
LEU 450.0030
GLU 460.0040
TRP 470.0040
VAL 480.0040
ALA 490.0038
THR 500.0018
ILE 510.0026
SER 520.0061
ASP 520.0103
GLY 530.0155
ASN 540.0149
SER 550.0105
TYR 560.0051
THR 570.0034
TYR 580.0040
TYR 590.0061
VAL 600.0078
ASP 610.0145
SER 620.0120
VAL 630.0097
LYS 640.0131
GLY 650.0149
ARG 660.0113
PHE 670.0078
THR 680.0072
ILE 690.0040
SER 700.0031
ARG 710.0049
ASP 720.0077
ASN 730.0105
ALA 740.0141
LYS 750.0104
ASN 760.0050
ASN 770.0033
LEU 780.0017
TYR 790.0026
LEU 800.0040
GLN 810.0072
MET 820.0101
SER 820.0116
SER 820.0092
LEU 820.0063
LYS 830.0039
SER 840.0073
GLU 850.0043
ASP 860.0015
THR 870.0041
ALA 880.0030
ILE 890.0032
TYR 900.0035
TYR 910.0031
CYS 920.0029
ALA 930.0031
ARG 940.0013
ASP 950.0020
GLY 960.0033
PRO 970.0027
THR 980.0010
ASP 990.0012
SER 1000.0046
SER 1000.0038
GLY 1000.0037
TYR 1000.0036
GLY 1000.0027
GLY 1000.0028
PHE 1000.0026
GLY 1010.0032
TYR 1020.0032
TRP 1030.0049
GLY 1040.0052
GLN 1050.0057
GLY 1060.0040
THR 1070.0047
LEU 1080.0044
VAL 1090.0056
THR 1100.0084
VAL 1110.0123
SER 1120.0223
GLU 1130.0299
ALA 1140.0175
LYS 1150.0089
THR 1160.0053
THR 1170.0077
PRO 1180.0092
PRO 1190.0061
SER 1200.0022
VAL 1210.0023
TYR 1220.0053
PRO 1230.0075
LEU 1240.0073
ALA 1250.0070
PRO 1260.0076
GLY 1270.0121
SER 1280.0157
ALA 1290.0217
ALA 1300.0095
GLN 1330.0175
THR 1340.0201
ASN 1350.0226
SER 1360.0105
MET 1370.0078
VAL 1380.0066
THR 1390.0055
LEU 1400.0033
GLY 1410.0022
CYS 1420.0013
LEU 1430.0015
VAL 1440.0025
LYS 1450.0019
GLY 1460.0045
TYR 1470.0084
PHE 1480.0089
PRO 1490.0067
GLU 1500.0064
PRO 1510.0072
VAL 1520.0064
THR 1530.0055
VAL 1540.0035
THR 1560.0056
TRP 1570.0057
ASN 1620.0075
SER 1630.0110
GLY 1640.0139
SER 1650.0152
LEU 1660.0133
SER 1670.0164
SER 1680.0184
GLY 1690.0112
VAL 1710.0049
HIS 1720.0036
THR 1730.0047
PHE 1740.0040
PRO 1750.0047
ALA 1760.0055
VAL 1770.0035
LEU 1780.0076
GLN 1790.0109
SER 1800.0331
ASP 1830.0164
LEU 1840.0124
TYR 1850.0095
THR 1860.0042
LEU 1870.0039
SER 1880.0038
SER 1890.0017
SER 1900.0019
VAL 1910.0048
THR 1920.0115
VAL 1930.0088
PRO 1940.0072
SER 1950.0051
SER 1960.0127
PRO 1980.0102
ARG 1990.0076
PRO 2000.0080
SER 2020.0135
GLU 2030.0098
THR 2040.0032
VAL 2050.0034
THR 2060.0023
CYS 2080.0030
ASN 2090.0042
VAL 2100.0038
ALA 2110.0064
HIS 2120.0072
PRO 2130.0082
ALA 2140.0073
SER 2150.0086
SER 2160.0073
THR 2170.0083
LYS 2180.0070
VAL 2190.0051
ASP 2200.0022
LYS 2210.0021
LYS 2220.0028
ILE 2230.0025
VAL 2260.0054
PRO 2270.0088
ARG 2280.0052
ASP 2320.0276
CYS 2330.0832

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.