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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0462
ILE 4790.0167
PHE 4800.0158
ILE 4810.0188
SER 4820.0186
ASP 4830.0182
ASP 4840.0182
LYS 4850.0161
ASP 4860.0152
SER 4870.0178
LEU 4880.0128
LYS 4890.0084
CYS 4900.0057
PRO 4910.0050
CYS 4920.0031
ASP 4930.0027
PRO 4940.0107
GLU 4950.0135
MET 4960.0175
VAL 4970.0285
SER 4980.0188
GLN 4990.0315
SER 5000.0095
THR 5010.0435
CYS 5020.0329
ARG 5030.0052
PHE 5040.0123
PHE 5050.0206
VAL 5060.0123
CYS 5070.0063
LYS 5080.0063
CYS 5090.0073
VAL 5100.0128
GLU 5110.0156
ARG 5120.0440
SER 20.0064
VAL 30.0077
LEU 40.0085
SER 50.0111
GLN 60.0090
SER 70.0080
PRO 80.0036
ALA 90.0075
ILE 100.0079
LEU 110.0070
SER 120.0116
ALA 130.0137
SER 140.0187
PRO 150.0180
GLY 160.0190
GLU 170.0196
LYS 180.0158
VAL 190.0110
THR 200.0044
MET 210.0042
THR 220.0084
CYS 230.0100
ARG 240.0111
ALA 250.0089
ARG 260.0182
SER 270.0048
SER 290.0071
VAL 300.0058
SER 310.0076
TYR 320.0062
MET 330.0059
HIS 340.0064
TRP 350.0075
TYR 360.0077
GLN 370.0074
GLN 380.0092
LYS 390.0080
SER 400.0108
GLY 410.0097
SER 420.0096
SER 430.0096
PRO 440.0098
LYS 450.0097
PRO 460.0095
TRP 470.0080
ILE 480.0079
HIS 490.0079
ALA 500.0076
THR 510.0075
SER 520.0088
ASN 530.0117
LEU 540.0132
ALA 550.0132
SER 560.0243
GLY 570.0216
VAL 580.0143
PRO 590.0075
ALA 600.0136
ARG 610.0114
PHE 620.0071
SER 630.0084
GLY 640.0078
SER 650.0078
GLY 660.0085
SER 670.0092
GLY 680.0086
THR 690.0092
SER 700.0113
TYR 710.0077
SER 720.0079
LEU 730.0069
THR 740.0074
ILE 750.0079
SER 760.0150
ARG 770.0164
VAL 780.0125
GLU 790.0141
ALA 800.0147
GLU 810.0120
ASP 820.0078
ALA 830.0082
ALA 840.0068
THR 850.0080
TYR 860.0063
TYR 870.0078
CYS 880.0083
GLN 890.0050
GLN 900.0046
TRP 910.0047
SER 920.0092
SER 930.0102
HIS 940.0094
PRO 950.0083
PRO 960.0038
THR 970.0015
PHE 980.0065
GLY 990.0077
SER 1000.0080
GLY 1010.0092
THR 1020.0056
LYS 1030.0062
LEU 1040.0072
GLU 1050.0101
ILE 1060.0119
LYS 1070.0132
ARG 1080.0091
ALA 1090.0077
ASP 1100.0056
ALA 1110.0084
ALA 1120.0134
PRO 1130.0152
THR 1140.0138
VAL 1150.0164
SER 1160.0098
ILE 1170.0103
PHE 1180.0100
PRO 1190.0091
PRO 1200.0104
SER 1210.0164
SER 1220.0288
GLU 1230.0228
GLN 1240.0183
LEU 1250.0258
THR 1260.0371
SER 1270.0361
GLY 1280.0309
GLY 1290.0225
ALA 1300.0159
SER 1310.0088
VAL 1320.0072
VAL 1330.0102
CYS 1340.0100
PHE 1350.0098
LEU 1360.0110
ASN 1370.0083
ASN 1380.0078
PHE 1390.0093
TYR 1400.0073
PRO 1410.0069
LYS 1420.0106
ASP 1430.0135
ILE 1440.0173
ASN 1450.0228
VAL 1460.0214
LYS 1470.0196
TRP 1480.0160
LYS 1490.0155
ILE 1500.0080
ASP 1510.0080
GLY 1520.0152
SER 1530.0182
GLU 1540.0150
ARG 1550.0159
GLN 1560.0148
ASN 1570.0196
GLY 1580.0079
VAL 1590.0083
LEU 1600.0097
ASN 1610.0115
SER 1620.0116
TRP 1630.0120
THR 1640.0089
ASP 1650.0078
GLN 1660.0059
ASP 1670.0127
SER 1680.0162
LYS 1690.0221
ASP 1700.0123
SER 1710.0090
THR 1720.0062
TYR 1730.0068
SER 1740.0092
MET 1750.0123
SER 1760.0106
SER 1770.0101
THR 1780.0091
LEU 1790.0087
THR 1800.0103
LEU 1810.0111
THR 1820.0261
LYS 1830.0250
ASP 1840.0230
GLU 1850.0172
TYR 1860.0133
GLU 1870.0131
ARG 1880.0131
HIS 1890.0061
ASN 1900.0030
SER 1910.0069
TYR 1920.0109
THR 1930.0156
CYS 1940.0207
GLU 1950.0232
ALA 1960.0256
THR 1970.0239
HIS 1980.0183
LYS 1990.0149
THR 2000.0202
SER 2010.0342
THR 2020.0376
SER 2030.0298
PRO 2040.0295
ILE 2050.0317
VAL 2060.0224
LYS 2070.0199
SER 2080.0179
PHE 2090.0142
ASN 2100.0100
ARG 2110.0080
ASN 2120.0114
GLU 2130.0105
CYS 2140.0103
GLU 10.0398
VAL 20.0191
GLN 30.0200
LEU 40.0101
VAL 50.0102
GLU 60.0093
SER 70.0070
GLY 80.0051
GLY 90.0035
GLY 100.0089
LEU 110.0098
VAL 120.0099
LYS 130.0172
PRO 140.0199
GLY 150.0201
GLY 160.0172
SER 170.0138
LEU 180.0104
LYS 190.0093
LEU 200.0078
SER 210.0098
CYS 220.0112
ALA 230.0131
ALA 240.0132
SER 250.0160
GLY 260.0202
PHE 270.0173
ILE 280.0168
PHE 290.0131
SER 300.0106
ASP 310.0096
TYR 320.0072
TYR 330.0038
MET 340.0059
TYR 350.0058
TRP 360.0062
VAL 370.0047
ARG 380.0034
GLN 390.0053
THR 400.0074
PRO 410.0127
GLU 420.0121
LYS 430.0098
ARG 440.0072
LEU 450.0070
GLU 460.0038
TRP 470.0050
VAL 480.0047
ALA 490.0075
THR 500.0068
ILE 510.0064
SER 520.0064
ASP 520.0073
GLY 530.0116
ASN 540.0136
SER 550.0085
TYR 560.0078
THR 570.0099
TYR 580.0086
TYR 590.0094
VAL 600.0100
ASP 610.0126
SER 620.0098
VAL 630.0111
LYS 640.0149
GLY 650.0187
ARG 660.0167
PHE 670.0101
THR 680.0105
ILE 690.0096
SER 700.0067
ARG 710.0084
ASP 720.0103
ASN 730.0097
ALA 740.0132
LYS 750.0175
ASN 760.0137
ASN 770.0127
LEU 780.0109
TYR 790.0113
LEU 800.0093
GLN 810.0106
MET 820.0120
SER 820.0163
SER 820.0187
LEU 820.0153
LYS 830.0167
SER 840.0170
GLU 850.0125
ASP 860.0091
THR 870.0107
ALA 880.0053
ILE 890.0053
TYR 900.0033
TYR 910.0040
CYS 920.0053
ALA 930.0073
ARG 940.0026
ASP 950.0022
GLY 960.0014
PRO 970.0026
THR 980.0033
ASP 990.0035
SER 1000.0026
SER 1000.0028
GLY 1000.0035
TYR 1000.0026
GLY 1000.0029
GLY 1000.0027
PHE 1000.0036
GLY 1010.0031
TYR 1020.0041
TRP 1030.0066
GLY 1040.0062
GLN 1050.0057
GLY 1060.0081
THR 1070.0058
LEU 1080.0056
VAL 1090.0069
THR 1100.0110
VAL 1110.0125
SER 1120.0157
GLU 1130.0202
ALA 1140.0224
LYS 1150.0154
THR 1160.0160
THR 1170.0220
PRO 1180.0220
PRO 1190.0185
SER 1200.0144
VAL 1210.0090
TYR 1220.0096
PRO 1230.0126
LEU 1240.0087
ALA 1250.0074
PRO 1260.0063
GLY 1270.0125
SER 1280.0199
ALA 1290.0297
ALA 1300.0373
GLN 1330.0450
THR 1340.0450
ASN 1350.0446
SER 1360.0449
MET 1370.0324
VAL 1380.0271
THR 1390.0128
LEU 1400.0132
GLY 1410.0132
CYS 1420.0077
LEU 1430.0096
VAL 1440.0100
LYS 1450.0135
GLY 1460.0166
TYR 1470.0192
PHE 1480.0210
PRO 1490.0201
GLU 1500.0217
PRO 1510.0233
VAL 1520.0220
THR 1530.0266
VAL 1540.0150
THR 1560.0253
TRP 1570.0238
ASN 1620.0328
SER 1630.0402
GLY 1640.0462
SER 1650.0407
LEU 1660.0366
SER 1670.0427
SER 1680.0428
GLY 1690.0281
VAL 1710.0091
HIS 1720.0051
THR 1730.0064
PHE 1740.0083
PRO 1750.0109
ALA 1760.0130
VAL 1770.0195
LEU 1780.0233
GLN 1790.0228
SER 1800.0327
ASP 1830.0240
LEU 1840.0220
TYR 1850.0222
THR 1860.0110
LEU 1870.0087
SER 1880.0066
SER 1890.0089
SER 1900.0088
VAL 1910.0116
THR 1920.0173
VAL 1930.0154
PRO 1940.0266
SER 1950.0333
SER 1960.0296
PRO 1980.0248
ARG 1990.0222
PRO 2000.0244
SER 2020.0266
GLU 2030.0311
THR 2040.0235
VAL 2050.0215
THR 2060.0229
CYS 2080.0215
ASN 2090.0242
VAL 2100.0246
ALA 2110.0299
HIS 2120.0256
PRO 2130.0242
ALA 2140.0225
SER 2150.0257
SER 2160.0295
THR 2170.0264
LYS 2180.0275
VAL 2190.0252
ASP 2200.0234
LYS 2210.0188
LYS 2220.0183
ILE 2230.0162
VAL 2260.0184
PRO 2270.0118
ARG 2280.0036
ASP 2320.0222
CYS 2330.0281

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.