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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0639
ILE 4790.0271
PHE 4800.0262
ILE 4810.0258
SER 4820.0260
ASP 4830.0308
ASP 4840.0304
LYS 4850.0209
ASP 4860.0217
SER 4870.0213
LEU 4880.0174
LYS 4890.0167
CYS 4900.0170
PRO 4910.0122
CYS 4920.0128
ASP 4930.0137
PRO 4940.0168
GLU 4950.0181
MET 4960.0223
VAL 4970.0264
SER 4980.0129
GLN 4990.0129
SER 5000.0453
THR 5010.0312
CYS 5020.0270
ARG 5030.0306
PHE 5040.0286
PHE 5050.0277
VAL 5060.0202
CYS 5070.0164
LYS 5080.0148
CYS 5090.0119
VAL 5100.0126
GLU 5110.0147
ARG 5120.0281
SER 20.0285
VAL 30.0282
LEU 40.0151
SER 50.0081
GLN 60.0064
SER 70.0085
PRO 80.0208
ALA 90.0223
ILE 100.0245
LEU 110.0221
SER 120.0189
ALA 130.0180
SER 140.0221
PRO 150.0231
GLY 160.0280
GLU 170.0242
LYS 180.0244
VAL 190.0225
THR 200.0117
MET 210.0117
THR 220.0116
CYS 230.0025
ARG 240.0120
ALA 250.0199
ARG 260.0458
SER 270.0332
SER 290.0198
VAL 300.0120
SER 310.0050
TYR 320.0028
MET 330.0041
HIS 340.0067
TRP 350.0061
TYR 360.0051
GLN 370.0048
GLN 380.0061
LYS 390.0117
SER 400.0163
GLY 410.0168
SER 420.0095
SER 430.0041
PRO 440.0031
LYS 450.0037
PRO 460.0045
TRP 470.0056
ILE 480.0063
HIS 490.0071
ALA 500.0079
THR 510.0039
SER 520.0064
ASN 530.0104
LEU 540.0099
ALA 550.0094
SER 560.0127
GLY 570.0090
VAL 580.0098
PRO 590.0163
ALA 600.0205
ARG 610.0212
PHE 620.0134
SER 630.0135
GLY 640.0126
SER 650.0052
GLY 660.0076
SER 670.0114
GLY 680.0205
THR 690.0214
SER 700.0145
TYR 710.0039
SER 720.0053
LEU 730.0078
THR 740.0190
ILE 750.0182
SER 760.0228
ARG 770.0274
VAL 780.0208
GLU 790.0204
ALA 800.0160
GLU 810.0160
ASP 820.0128
ALA 830.0142
ALA 840.0132
THR 850.0118
TYR 860.0070
TYR 870.0058
CYS 880.0070
GLN 890.0090
GLN 900.0076
TRP 910.0078
SER 920.0104
SER 930.0105
HIS 940.0123
PRO 950.0118
PRO 960.0124
THR 970.0143
PHE 980.0084
GLY 990.0088
SER 1000.0091
GLY 1010.0120
THR 1020.0133
LYS 1030.0173
LEU 1040.0174
GLU 1050.0168
ILE 1060.0140
LYS 1070.0160
ARG 1080.0146
ALA 1090.0189
ASP 1100.0122
ALA 1110.0110
ALA 1120.0114
PRO 1130.0072
THR 1140.0097
VAL 1150.0122
SER 1160.0125
ILE 1170.0113
PHE 1180.0101
PRO 1190.0085
PRO 1200.0079
SER 1210.0082
SER 1220.0117
GLU 1230.0120
GLN 1240.0122
LEU 1250.0128
THR 1260.0209
SER 1270.0228
GLY 1280.0146
GLY 1290.0120
ALA 1300.0057
SER 1310.0055
VAL 1320.0066
VAL 1330.0084
CYS 1340.0094
PHE 1350.0094
LEU 1360.0099
ASN 1370.0104
ASN 1380.0082
PHE 1390.0071
TYR 1400.0071
PRO 1410.0091
LYS 1420.0114
ASP 1430.0104
ILE 1440.0078
ASN 1450.0128
VAL 1460.0167
LYS 1470.0157
TRP 1480.0137
LYS 1490.0211
ILE 1500.0190
ASP 1510.0225
GLY 1520.0303
SER 1530.0299
GLU 1540.0251
ARG 1550.0193
GLN 1560.0141
ASN 1570.0118
GLY 1580.0056
VAL 1590.0066
LEU 1600.0088
ASN 1610.0097
SER 1620.0106
TRP 1630.0114
THR 1640.0164
ASP 1650.0191
GLN 1660.0157
ASP 1670.0224
SER 1680.0197
LYS 1690.0267
ASP 1700.0148
SER 1710.0094
THR 1720.0103
TYR 1730.0105
SER 1740.0102
MET 1750.0107
SER 1760.0094
SER 1770.0090
THR 1780.0083
LEU 1790.0100
THR 1800.0088
LEU 1810.0080
THR 1820.0085
LYS 1830.0034
ASP 1840.0119
GLU 1850.0153
TYR 1860.0112
GLU 1870.0123
ARG 1880.0210
HIS 1890.0201
ASN 1900.0163
SER 1910.0174
TYR 1920.0170
THR 1930.0198
CYS 1940.0161
GLU 1950.0162
ALA 1960.0166
THR 1970.0117
HIS 1980.0056
LYS 1990.0060
THR 2000.0115
SER 2010.0156
THR 2020.0217
SER 2030.0177
PRO 2040.0161
ILE 2050.0122
VAL 2060.0176
LYS 2070.0169
SER 2080.0167
PHE 2090.0174
ASN 2100.0137
ARG 2110.0102
ASN 2120.0137
GLU 2130.0161
CYS 2140.0207
GLU 10.0639
VAL 20.0258
GLN 30.0293
LEU 40.0131
VAL 50.0150
GLU 60.0148
SER 70.0113
GLY 80.0084
GLY 90.0036
GLY 100.0130
LEU 110.0136
VAL 120.0165
LYS 130.0236
PRO 140.0246
GLY 150.0202
GLY 160.0099
SER 170.0051
LEU 180.0018
LYS 190.0100
LEU 200.0089
SER 210.0119
CYS 220.0138
ALA 230.0121
ALA 240.0078
SER 250.0153
GLY 260.0254
PHE 270.0188
ILE 280.0114
PHE 290.0039
SER 300.0069
ASP 310.0065
TYR 320.0054
TYR 330.0087
MET 340.0063
TYR 350.0066
TRP 360.0071
VAL 370.0022
ARG 380.0009
GLN 390.0026
THR 400.0056
PRO 410.0094
GLU 420.0096
LYS 430.0061
ARG 440.0050
LEU 450.0033
GLU 460.0048
TRP 470.0044
VAL 480.0026
ALA 490.0066
THR 500.0067
ILE 510.0076
SER 520.0115
ASP 520.0108
GLY 530.0117
ASN 540.0132
SER 550.0080
TYR 560.0098
THR 570.0099
TYR 580.0038
TYR 590.0021
VAL 600.0051
ASP 610.0184
SER 620.0180
VAL 630.0118
LYS 640.0156
GLY 650.0178
ARG 660.0145
PHE 670.0069
THR 680.0098
ILE 690.0095
SER 700.0114
ARG 710.0101
ASP 720.0119
ASN 730.0069
ALA 740.0090
LYS 750.0129
ASN 760.0065
ASN 770.0104
LEU 780.0114
TYR 790.0120
LEU 800.0085
GLN 810.0092
MET 820.0073
SER 820.0084
SER 820.0126
LEU 820.0134
LYS 830.0203
SER 840.0233
GLU 850.0194
ASP 860.0134
THR 870.0127
ALA 880.0047
ILE 890.0019
TYR 900.0026
TYR 910.0061
CYS 920.0072
ALA 930.0056
ARG 940.0070
ASP 950.0079
GLY 960.0072
PRO 970.0121
THR 980.0133
ASP 990.0140
SER 1000.0082
SER 1000.0076
GLY 1000.0075
TYR 1000.0081
GLY 1000.0078
GLY 1000.0078
PHE 1000.0075
GLY 1010.0077
TYR 1020.0077
TRP 1030.0046
GLY 1040.0066
GLN 1050.0070
GLY 1060.0062
THR 1070.0035
LEU 1080.0022
VAL 1090.0072
THR 1100.0110
VAL 1110.0151
SER 1120.0230
GLU 1130.0295
ALA 1140.0186
LYS 1150.0239
THR 1160.0206
THR 1170.0227
PRO 1180.0149
PRO 1190.0149
SER 1200.0117
VAL 1210.0036
TYR 1220.0056
PRO 1230.0052
LEU 1240.0068
ALA 1250.0075
PRO 1260.0080
GLY 1270.0121
SER 1280.0264
ALA 1290.0435
ALA 1300.0239
GLN 1330.0311
THR 1340.0146
ASN 1350.0123
SER 1360.0095
MET 1370.0080
VAL 1380.0055
THR 1390.0059
LEU 1400.0044
GLY 1410.0055
CYS 1420.0013
LEU 1430.0041
VAL 1440.0060
LYS 1450.0113
GLY 1460.0139
TYR 1470.0180
PHE 1480.0184
PRO 1490.0172
GLU 1500.0205
PRO 1510.0281
VAL 1520.0237
THR 1530.0237
VAL 1540.0086
THR 1560.0124
TRP 1570.0120
ASN 1620.0223
SER 1630.0274
GLY 1640.0300
SER 1650.0281
LEU 1660.0162
SER 1670.0184
SER 1680.0142
GLY 1690.0147
VAL 1710.0096
HIS 1720.0083
THR 1730.0080
PHE 1740.0096
PRO 1750.0121
ALA 1760.0160
VAL 1770.0163
LEU 1780.0183
GLN 1790.0272
SER 1800.0365
ASP 1830.0161
LEU 1840.0204
TYR 1850.0229
THR 1860.0146
LEU 1870.0103
SER 1880.0049
SER 1890.0046
SER 1900.0050
VAL 1910.0050
THR 1920.0062
VAL 1930.0045
PRO 1940.0069
SER 1950.0098
SER 1960.0110
PRO 1980.0108
ARG 1990.0122
PRO 2000.0205
SER 2020.0305
GLU 2030.0287
THR 2040.0249
VAL 2050.0129
THR 2060.0126
CYS 2080.0096
ASN 2090.0072
VAL 2100.0121
ALA 2110.0220
HIS 2120.0233
PRO 2130.0289
ALA 2140.0267
SER 2150.0218
SER 2160.0250
THR 2170.0211
LYS 2180.0186
VAL 2190.0092
ASP 2200.0048
LYS 2210.0056
LYS 2220.0065
ILE 2230.0075
VAL 2260.0113
PRO 2270.0101
ARG 2280.0110
ASP 2320.0283
CYS 2330.0369

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.