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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 37  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0998
ILE 4790.0074
PHE 4800.0072
ILE 4810.0112
SER 4820.0146
ASP 4830.0228
ASP 4840.0224
LYS 4850.0168
ASP 4860.0192
SER 4870.0165
LEU 4880.0107
LYS 4890.0136
CYS 4900.0093
PRO 4910.0053
CYS 4920.0066
ASP 4930.0074
PRO 4940.0100
GLU 4950.0134
MET 4960.0192
VAL 4970.0268
SER 4980.0137
GLN 4990.0177
SER 5000.0322
THR 5010.0366
CYS 5020.0295
ARG 5030.0194
PHE 5040.0207
PHE 5050.0225
VAL 5060.0107
CYS 5070.0066
LYS 5080.0066
CYS 5090.0088
VAL 5100.0129
GLU 5110.0134
ARG 5120.0550
SER 20.0367
VAL 30.0349
LEU 40.0200
SER 50.0152
GLN 60.0076
SER 70.0073
PRO 80.0094
ALA 90.0119
ILE 100.0157
LEU 110.0166
SER 120.0165
ALA 130.0170
SER 140.0196
PRO 150.0190
GLY 160.0230
GLU 170.0209
LYS 180.0162
VAL 190.0161
THR 200.0059
MET 210.0034
THR 220.0016
CYS 230.0145
ARG 240.0264
ALA 250.0288
ARG 260.0998
SER 270.0399
SER 290.0155
VAL 300.0145
SER 310.0149
TYR 320.0079
MET 330.0063
HIS 340.0071
TRP 350.0067
TYR 360.0081
GLN 370.0087
GLN 380.0050
LYS 390.0047
SER 400.0049
GLY 410.0079
SER 420.0050
SER 430.0032
PRO 440.0062
LYS 450.0072
PRO 460.0090
TRP 470.0105
ILE 480.0093
HIS 490.0089
ALA 500.0099
THR 510.0079
SER 520.0105
ASN 530.0104
LEU 540.0123
ALA 550.0135
SER 560.0181
GLY 570.0194
VAL 580.0146
PRO 590.0137
ALA 600.0130
ARG 610.0111
PHE 620.0097
SER 630.0092
GLY 640.0095
SER 650.0111
GLY 660.0136
SER 670.0149
GLY 680.0150
THR 690.0254
SER 700.0245
TYR 710.0072
SER 720.0054
LEU 730.0064
THR 740.0104
ILE 750.0098
SER 760.0102
ARG 770.0175
VAL 780.0158
GLU 790.0143
ALA 800.0109
GLU 810.0089
ASP 820.0106
ALA 830.0097
ALA 840.0088
THR 850.0086
TYR 860.0068
TYR 870.0066
CYS 880.0061
GLN 890.0068
GLN 900.0082
TRP 910.0074
SER 920.0135
SER 930.0124
HIS 940.0078
PRO 950.0076
PRO 960.0100
THR 970.0123
PHE 980.0075
GLY 990.0080
SER 1000.0087
GLY 1010.0078
THR 1020.0084
LYS 1030.0107
LEU 1040.0129
GLU 1050.0107
ILE 1060.0104
LYS 1070.0101
ARG 1080.0067
ALA 1090.0090
ASP 1100.0105
ALA 1110.0105
ALA 1120.0118
PRO 1130.0095
THR 1140.0090
VAL 1150.0069
SER 1160.0064
ILE 1170.0049
PHE 1180.0046
PRO 1190.0061
PRO 1200.0022
SER 1210.0079
SER 1220.0233
GLU 1230.0207
GLN 1240.0156
LEU 1250.0227
THR 1260.0392
SER 1270.0421
GLY 1280.0296
GLY 1290.0209
ALA 1300.0071
SER 1310.0042
VAL 1320.0039
VAL 1330.0048
CYS 1340.0059
PHE 1350.0075
LEU 1360.0089
ASN 1370.0108
ASN 1380.0105
PHE 1390.0107
TYR 1400.0094
PRO 1410.0085
LYS 1420.0099
ASP 1430.0124
ILE 1440.0087
ASN 1450.0091
VAL 1460.0082
LYS 1470.0131
TRP 1480.0132
LYS 1490.0176
ILE 1500.0130
ASP 1510.0118
GLY 1520.0262
SER 1530.0307
GLU 1540.0356
ARG 1550.0272
GLN 1560.0249
ASN 1570.0285
GLY 1580.0101
VAL 1590.0071
LEU 1600.0069
ASN 1610.0048
SER 1620.0055
TRP 1630.0087
THR 1640.0099
ASP 1650.0076
GLN 1660.0046
ASP 1670.0080
SER 1680.0041
LYS 1690.0119
ASP 1700.0097
SER 1710.0044
THR 1720.0070
TYR 1730.0077
SER 1740.0091
MET 1750.0100
SER 1760.0071
SER 1770.0052
THR 1780.0047
LEU 1790.0041
THR 1800.0014
LEU 1810.0041
THR 1820.0140
LYS 1830.0072
ASP 1840.0042
GLU 1850.0080
TYR 1860.0044
GLU 1870.0083
ARG 1880.0140
HIS 1890.0119
ASN 1900.0140
SER 1910.0074
TYR 1920.0064
THR 1930.0077
CYS 1940.0062
GLU 1950.0094
ALA 1960.0053
THR 1970.0061
HIS 1980.0063
LYS 1990.0097
THR 2000.0104
SER 2010.0053
THR 2020.0027
SER 2030.0126
PRO 2040.0107
ILE 2050.0064
VAL 2060.0070
LYS 2070.0038
SER 2080.0036
PHE 2090.0098
ASN 2100.0116
ARG 2110.0128
ASN 2120.0179
GLU 2130.0184
CYS 2140.0184
GLU 10.0192
VAL 20.0112
GLN 30.0071
LEU 40.0056
VAL 50.0054
GLU 60.0053
SER 70.0047
GLY 80.0030
GLY 90.0036
GLY 100.0058
LEU 110.0061
VAL 120.0083
LYS 130.0201
PRO 140.0095
GLY 150.0068
GLY 160.0112
SER 170.0094
LEU 180.0063
LYS 190.0055
LEU 200.0041
SER 210.0050
CYS 220.0064
ALA 230.0095
ALA 240.0112
SER 250.0138
GLY 260.0173
PHE 270.0195
ILE 280.0223
PHE 290.0174
SER 300.0179
ASP 310.0153
TYR 320.0122
TYR 330.0091
MET 340.0055
TYR 350.0053
TRP 360.0049
VAL 370.0033
ARG 380.0041
GLN 390.0048
THR 400.0087
PRO 410.0125
GLU 420.0126
LYS 430.0050
ARG 440.0049
LEU 450.0026
GLU 460.0047
TRP 470.0058
VAL 480.0070
ALA 490.0082
THR 500.0086
ILE 510.0084
SER 520.0141
ASP 520.0152
GLY 530.0183
ASN 540.0196
SER 550.0156
TYR 560.0167
THR 570.0139
TYR 580.0094
TYR 590.0097
VAL 600.0122
ASP 610.0177
SER 620.0185
VAL 630.0147
LYS 640.0164
GLY 650.0163
ARG 660.0146
PHE 670.0096
THR 680.0072
ILE 690.0044
SER 700.0036
ARG 710.0077
ASP 720.0134
ASN 730.0209
ALA 740.0283
LYS 750.0251
ASN 760.0175
ASN 770.0121
LEU 780.0067
TYR 790.0049
LEU 800.0043
GLN 810.0068
MET 820.0101
SER 820.0136
SER 820.0126
LEU 820.0060
LYS 830.0080
SER 840.0100
GLU 850.0120
ASP 860.0084
THR 870.0088
ALA 880.0066
ILE 890.0059
TYR 900.0043
TYR 910.0041
CYS 920.0044
ALA 930.0039
ARG 940.0063
ASP 950.0082
GLY 960.0103
PRO 970.0150
THR 980.0163
ASP 990.0158
SER 1000.0096
SER 1000.0084
GLY 1000.0077
TYR 1000.0054
GLY 1000.0039
GLY 1000.0044
PHE 1000.0051
GLY 1010.0075
TYR 1020.0083
TRP 1030.0036
GLY 1040.0030
GLN 1050.0037
GLY 1060.0043
THR 1070.0048
LEU 1080.0045
VAL 1090.0056
THR 1100.0071
VAL 1110.0072
SER 1120.0219
GLU 1130.0353
ALA 1140.0264
LYS 1150.0185
THR 1160.0068
THR 1170.0068
PRO 1180.0105
PRO 1190.0117
SER 1200.0112
VAL 1210.0090
TYR 1220.0068
PRO 1230.0056
LEU 1240.0035
ALA 1250.0045
PRO 1260.0067
GLY 1270.0115
SER 1280.0126
ALA 1290.0152
ALA 1300.0116
GLN 1330.0199
THR 1340.0189
ASN 1350.0143
SER 1360.0126
MET 1370.0116
VAL 1380.0122
THR 1390.0080
LEU 1400.0071
GLY 1410.0072
CYS 1420.0056
LEU 1430.0073
VAL 1440.0090
LYS 1450.0117
GLY 1460.0103
TYR 1470.0112
PHE 1480.0124
PRO 1490.0130
GLU 1500.0177
PRO 1510.0195
VAL 1520.0177
THR 1530.0189
VAL 1540.0091
THR 1560.0069
TRP 1570.0070
ASN 1620.0116
SER 1630.0103
GLY 1640.0093
SER 1650.0204
LEU 1660.0174
SER 1670.0181
SER 1680.0244
GLY 1690.0153
VAL 1710.0083
HIS 1720.0085
THR 1730.0082
PHE 1740.0035
PRO 1750.0063
ALA 1760.0114
VAL 1770.0141
LEU 1780.0159
GLN 1790.0154
SER 1800.0228
ASP 1830.0190
LEU 1840.0144
TYR 1850.0161
THR 1860.0077
LEU 1870.0066
SER 1880.0047
SER 1890.0068
SER 1900.0068
VAL 1910.0073
THR 1920.0085
VAL 1930.0103
PRO 1940.0125
SER 1950.0137
SER 1960.0125
PRO 1980.0115
ARG 1990.0089
PRO 2000.0112
SER 2020.0229
GLU 2030.0157
THR 2040.0037
VAL 2050.0057
THR 2060.0077
CYS 2080.0080
ASN 2090.0099
VAL 2100.0122
ALA 2110.0164
HIS 2120.0154
PRO 2130.0170
ALA 2140.0130
SER 2150.0107
SER 2160.0127
THR 2170.0152
LYS 2180.0145
VAL 2190.0120
ASP 2200.0102
LYS 2210.0077
LYS 2220.0049
ILE 2230.0036
VAL 2260.0090
PRO 2270.0070
ARG 2280.0088
ASP 2320.0242
CYS 2330.0248

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.