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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1508
ILE 4790.0279
PHE 4800.0225
ILE 4810.0173
SER 4820.0217
ASP 4830.0250
ASP 4840.0258
LYS 4850.0088
ASP 4860.0089
SER 4870.0151
LEU 4880.0119
LYS 4890.0033
CYS 4900.0029
PRO 4910.0043
CYS 4920.0061
ASP 4930.0078
PRO 4940.0039
GLU 4950.0060
MET 4960.0131
VAL 4970.0256
SER 4980.0182
GLN 4990.0152
SER 5000.0396
THR 5010.0391
CYS 5020.0128
ARG 5030.0183
PHE 5040.0177
PHE 5050.0176
VAL 5060.0102
CYS 5070.0072
LYS 5080.0084
CYS 5090.0203
VAL 5100.0322
GLU 5110.0378
ARG 5120.1508
SER 20.0358
VAL 30.0322
LEU 40.0172
SER 50.0116
GLN 60.0136
SER 70.0179
PRO 80.0159
ALA 90.0157
ILE 100.0124
LEU 110.0120
SER 120.0125
ALA 130.0107
SER 140.0172
PRO 150.0147
GLY 160.0172
GLU 170.0149
LYS 180.0063
VAL 190.0093
THR 200.0149
MET 210.0153
THR 220.0188
CYS 230.0171
ARG 240.0197
ALA 250.0254
ARG 260.0446
SER 270.0434
SER 290.0378
VAL 300.0284
SER 310.0247
TYR 320.0117
MET 330.0113
HIS 340.0125
TRP 350.0114
TYR 360.0087
GLN 370.0064
GLN 380.0029
LYS 390.0047
SER 400.0092
GLY 410.0214
SER 420.0149
SER 430.0068
PRO 440.0049
LYS 450.0089
PRO 460.0118
TRP 470.0103
ILE 480.0116
HIS 490.0114
ALA 500.0147
THR 510.0136
SER 520.0122
ASN 530.0166
LEU 540.0159
ALA 550.0161
SER 560.0217
GLY 570.0194
VAL 580.0159
PRO 590.0167
ALA 600.0185
ARG 610.0131
PHE 620.0095
SER 630.0128
GLY 640.0159
SER 650.0190
GLY 660.0238
SER 670.0309
GLY 680.0388
THR 690.0333
SER 700.0288
TYR 710.0179
SER 720.0167
LEU 730.0155
THR 740.0117
ILE 750.0054
SER 760.0074
ARG 770.0116
VAL 780.0082
GLU 790.0109
ALA 800.0084
GLU 810.0067
ASP 820.0053
ALA 830.0047
ALA 840.0033
THR 850.0043
TYR 860.0074
TYR 870.0095
CYS 880.0136
GLN 890.0119
GLN 900.0078
TRP 910.0069
SER 920.0177
SER 930.0218
HIS 940.0242
PRO 950.0162
PRO 960.0115
THR 970.0163
PHE 980.0118
GLY 990.0123
SER 1000.0099
GLY 1010.0126
THR 1020.0101
LYS 1030.0066
LEU 1040.0066
GLU 1050.0089
ILE 1060.0095
LYS 1070.0139
ARG 1080.0090
ALA 1090.0061
ASP 1100.0054
ALA 1110.0050
ALA 1120.0042
PRO 1130.0022
THR 1140.0048
VAL 1150.0050
SER 1160.0057
ILE 1170.0042
PHE 1180.0041
PRO 1190.0042
PRO 1200.0063
SER 1210.0069
SER 1220.0150
GLU 1230.0171
GLN 1240.0170
LEU 1250.0225
THR 1260.0369
SER 1270.0419
GLY 1280.0283
GLY 1290.0226
ALA 1300.0103
SER 1310.0070
VAL 1320.0054
VAL 1330.0054
CYS 1340.0033
PHE 1350.0044
LEU 1360.0040
ASN 1370.0048
ASN 1380.0037
PHE 1390.0032
TYR 1400.0050
PRO 1410.0054
LYS 1420.0061
ASP 1430.0020
ILE 1440.0018
ASN 1450.0029
VAL 1460.0060
LYS 1470.0068
TRP 1480.0059
LYS 1490.0086
ILE 1500.0042
ASP 1510.0027
GLY 1520.0139
SER 1530.0177
GLU 1540.0177
ARG 1550.0108
GLN 1560.0089
ASN 1570.0090
GLY 1580.0026
VAL 1590.0034
LEU 1600.0037
ASN 1610.0043
SER 1620.0054
TRP 1630.0057
THR 1640.0073
ASP 1650.0069
GLN 1660.0056
ASP 1670.0074
SER 1680.0086
LYS 1690.0117
ASP 1700.0066
SER 1710.0069
THR 1720.0061
TYR 1730.0043
SER 1740.0045
MET 1750.0059
SER 1760.0047
SER 1770.0038
THR 1780.0037
LEU 1790.0059
THR 1800.0066
LEU 1810.0069
THR 1820.0114
LYS 1830.0073
ASP 1840.0055
GLU 1850.0077
TYR 1860.0048
GLU 1870.0099
ARG 1880.0140
HIS 1890.0089
ASN 1900.0070
SER 1910.0033
TYR 1920.0051
THR 1930.0089
CYS 1940.0080
GLU 1950.0085
ALA 1960.0069
THR 1970.0051
HIS 1980.0021
LYS 1990.0058
THR 2000.0101
SER 2010.0127
THR 2020.0239
SER 2030.0063
PRO 2040.0080
ILE 2050.0069
VAL 2060.0112
LYS 2070.0101
SER 2080.0088
PHE 2090.0088
ASN 2100.0064
ARG 2110.0080
ASN 2120.0121
GLU 2130.0134
CYS 2140.0156
GLU 10.0078
VAL 20.0106
GLN 30.0089
LEU 40.0101
VAL 50.0091
GLU 60.0094
SER 70.0131
GLY 80.0139
GLY 90.0128
GLY 100.0106
LEU 110.0063
VAL 120.0044
LYS 130.0074
PRO 140.0086
GLY 150.0082
GLY 160.0059
SER 170.0070
LEU 180.0112
LYS 190.0129
LEU 200.0125
SER 210.0156
CYS 220.0142
ALA 230.0190
ALA 240.0208
SER 250.0217
GLY 260.0201
PHE 270.0249
ILE 280.0317
PHE 290.0283
SER 300.0308
ASP 310.0238
TYR 320.0189
TYR 330.0130
MET 340.0108
TYR 350.0100
TRP 360.0088
VAL 370.0083
ARG 380.0100
GLN 390.0112
THR 400.0178
PRO 410.0293
GLU 420.0303
LYS 430.0182
ARG 440.0132
LEU 450.0043
GLU 460.0071
TRP 470.0063
VAL 480.0083
ALA 490.0078
THR 500.0101
ILE 510.0115
SER 520.0170
ASP 520.0176
GLY 530.0176
ASN 540.0166
SER 550.0143
TYR 560.0140
THR 570.0132
TYR 580.0098
TYR 590.0095
VAL 600.0087
ASP 610.0156
SER 620.0133
VAL 630.0119
LYS 640.0135
GLY 650.0120
ARG 660.0092
PHE 670.0087
THR 680.0103
ILE 690.0116
SER 700.0170
ARG 710.0220
ASP 720.0280
ASN 730.0386
ALA 740.0455
LYS 750.0395
ASN 760.0308
ASN 770.0243
LEU 780.0178
TYR 790.0167
LEU 800.0118
GLN 810.0103
MET 820.0091
SER 820.0047
SER 820.0029
LEU 820.0044
LYS 830.0086
SER 840.0100
GLU 850.0134
ASP 860.0114
THR 870.0122
ALA 880.0124
ILE 890.0128
TYR 900.0115
TYR 910.0083
CYS 920.0090
ALA 930.0099
ARG 940.0088
ASP 950.0097
GLY 960.0106
PRO 970.0141
THR 980.0171
ASP 990.0152
SER 1000.0049
SER 1000.0051
GLY 1000.0056
TYR 1000.0040
GLY 1000.0041
GLY 1000.0034
PHE 1000.0051
GLY 1010.0067
TYR 1020.0089
TRP 1030.0058
GLY 1040.0044
GLN 1050.0044
GLY 1060.0089
THR 1070.0102
LEU 1080.0106
VAL 1090.0118
THR 1100.0086
VAL 1110.0054
SER 1120.0067
GLU 1130.0105
ALA 1140.0043
LYS 1150.0019
THR 1160.0027
THR 1170.0018
PRO 1180.0042
PRO 1190.0036
SER 1200.0056
VAL 1210.0075
TYR 1220.0073
PRO 1230.0042
LEU 1240.0060
ALA 1250.0060
PRO 1260.0067
GLY 1270.0083
SER 1280.0135
ALA 1290.0259
ALA 1300.0160
GLN 1330.0198
THR 1340.0214
ASN 1350.0182
SER 1360.0230
MET 1370.0186
VAL 1380.0126
THR 1390.0067
LEU 1400.0066
GLY 1410.0070
CYS 1420.0050
LEU 1430.0065
VAL 1440.0051
LYS 1450.0061
GLY 1460.0044
TYR 1470.0023
PHE 1480.0024
PRO 1490.0039
GLU 1500.0043
PRO 1510.0016
VAL 1520.0034
THR 1530.0072
VAL 1540.0059
THR 1560.0087
TRP 1570.0105
ASN 1620.0167
SER 1630.0170
GLY 1640.0186
SER 1650.0207
LEU 1660.0183
SER 1670.0174
SER 1680.0264
GLY 1690.0203
VAL 1710.0093
HIS 1720.0092
THR 1730.0082
PHE 1740.0049
PRO 1750.0045
ALA 1760.0047
VAL 1770.0060
LEU 1780.0114
GLN 1790.0183
SER 1800.0372
ASP 1830.0100
LEU 1840.0059
TYR 1850.0022
THR 1860.0047
LEU 1870.0047
SER 1880.0052
SER 1890.0079
SER 1900.0084
VAL 1910.0091
THR 1920.0096
VAL 1930.0138
PRO 1940.0169
SER 1950.0156
SER 1960.0120
PRO 1980.0122
ARG 1990.0096
PRO 2000.0167
SER 2020.0305
GLU 2030.0246
THR 2040.0123
VAL 2050.0068
THR 2060.0065
CYS 2080.0079
ASN 2090.0092
VAL 2100.0068
ALA 2110.0078
HIS 2120.0052
PRO 2130.0070
ALA 2140.0048
SER 2150.0085
SER 2160.0099
THR 2170.0100
LYS 2180.0120
VAL 2190.0102
ASP 2200.0078
LYS 2210.0025
LYS 2220.0041
ILE 2230.0051
VAL 2260.0072
PRO 2270.0085
ARG 2280.0087
ASP 2320.0158
CYS 2330.0147

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.