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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 42  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0961
ILE 4790.0191
PHE 4800.0181
ILE 4810.0207
SER 4820.0234
ASP 4830.0266
ASP 4840.0288
LYS 4850.0212
ASP 4860.0211
SER 4870.0208
LEU 4880.0158
LYS 4890.0143
CYS 4900.0145
PRO 4910.0084
CYS 4920.0101
ASP 4930.0116
PRO 4940.0167
GLU 4950.0165
MET 4960.0196
VAL 4970.0216
SER 4980.0138
GLN 4990.0049
SER 5000.0278
THR 5010.0342
CYS 5020.0293
ARG 5030.0257
PHE 5040.0249
PHE 5050.0260
VAL 5060.0154
CYS 5070.0145
LYS 5080.0138
CYS 5090.0103
VAL 5100.0132
GLU 5110.0141
ARG 5120.0564
SER 20.0177
VAL 30.0179
LEU 40.0123
SER 50.0098
GLN 60.0077
SER 70.0095
PRO 80.0179
ALA 90.0201
ILE 100.0218
LEU 110.0169
SER 120.0156
ALA 130.0148
SER 140.0152
PRO 150.0158
GLY 160.0167
GLU 170.0140
LYS 180.0121
VAL 190.0120
THR 200.0096
MET 210.0087
THR 220.0068
CYS 230.0073
ARG 240.0082
ALA 250.0132
ARG 260.0251
SER 270.0247
SER 290.0168
VAL 300.0122
SER 310.0089
TYR 320.0060
MET 330.0059
HIS 340.0059
TRP 350.0046
TYR 360.0066
GLN 370.0076
GLN 380.0097
LYS 390.0087
SER 400.0066
GLY 410.0108
SER 420.0095
SER 430.0075
PRO 440.0079
LYS 450.0081
PRO 460.0071
TRP 470.0078
ILE 480.0060
HIS 490.0078
ALA 500.0080
THR 510.0076
SER 520.0096
ASN 530.0136
LEU 540.0140
ALA 550.0146
SER 560.0285
GLY 570.0268
VAL 580.0162
PRO 590.0125
ALA 600.0089
ARG 610.0058
PHE 620.0057
SER 630.0055
GLY 640.0060
SER 650.0074
GLY 660.0074
SER 670.0102
GLY 680.0138
THR 690.0118
SER 700.0067
TYR 710.0043
SER 720.0040
LEU 730.0042
THR 740.0077
ILE 750.0085
SER 760.0080
ARG 770.0134
VAL 780.0138
GLU 790.0156
ALA 800.0130
GLU 810.0130
ASP 820.0130
ALA 830.0123
ALA 840.0120
THR 850.0118
TYR 860.0077
TYR 870.0064
CYS 880.0049
GLN 890.0068
GLN 900.0047
TRP 910.0025
SER 920.0054
SER 930.0063
HIS 940.0069
PRO 950.0041
PRO 960.0033
THR 970.0060
PHE 980.0074
GLY 990.0077
SER 1000.0086
GLY 1010.0108
THR 1020.0114
LYS 1030.0149
LEU 1040.0147
GLU 1050.0126
ILE 1060.0104
LYS 1070.0054
ARG 1080.0035
ALA 1090.0110
ASP 1100.0118
ALA 1110.0116
ALA 1120.0108
PRO 1130.0081
THR 1140.0066
VAL 1150.0052
SER 1160.0055
ILE 1170.0061
PHE 1180.0062
PRO 1190.0053
PRO 1200.0059
SER 1210.0054
SER 1220.0131
GLU 1230.0122
GLN 1240.0111
LEU 1250.0163
THR 1260.0201
SER 1270.0192
GLY 1280.0181
GLY 1290.0130
ALA 1300.0101
SER 1310.0063
VAL 1320.0058
VAL 1330.0047
CYS 1340.0050
PHE 1350.0056
LEU 1360.0060
ASN 1370.0068
ASN 1380.0087
PHE 1390.0091
TYR 1400.0094
PRO 1410.0082
LYS 1420.0086
ASP 1430.0121
ILE 1440.0085
ASN 1450.0051
VAL 1460.0048
LYS 1470.0102
TRP 1480.0107
LYS 1490.0155
ILE 1500.0084
ASP 1510.0129
GLY 1520.0313
SER 1530.0349
GLU 1540.0361
ARG 1550.0300
GLN 1560.0260
ASN 1570.0304
GLY 1580.0147
VAL 1590.0088
LEU 1600.0072
ASN 1610.0061
SER 1620.0081
TRP 1630.0093
THR 1640.0057
ASP 1650.0036
GLN 1660.0041
ASP 1670.0061
SER 1680.0064
LYS 1690.0061
ASP 1700.0075
SER 1710.0041
THR 1720.0075
TYR 1730.0069
SER 1740.0074
MET 1750.0070
SER 1760.0061
SER 1770.0034
THR 1780.0048
LEU 1790.0055
THR 1800.0047
LEU 1810.0040
THR 1820.0131
LYS 1830.0155
ASP 1840.0187
GLU 1850.0143
TYR 1860.0104
GLU 1870.0131
ARG 1880.0150
HIS 1890.0114
ASN 1900.0072
SER 1910.0055
TYR 1920.0032
THR 1930.0027
CYS 1940.0028
GLU 1950.0058
ALA 1960.0010
THR 1970.0050
HIS 1980.0085
LYS 1990.0132
THR 2000.0174
SER 2010.0158
THR 2020.0221
SER 2030.0190
PRO 2040.0117
ILE 2050.0089
VAL 2060.0052
LYS 2070.0043
SER 2080.0058
PHE 2090.0124
ASN 2100.0092
ARG 2110.0030
ASN 2120.0244
GLU 2130.0338
CYS 2140.0428
GLU 10.0200
VAL 20.0113
GLN 30.0131
LEU 40.0065
VAL 50.0069
GLU 60.0048
SER 70.0043
GLY 80.0026
GLY 90.0044
GLY 100.0106
LEU 110.0100
VAL 120.0107
LYS 130.0119
PRO 140.0063
GLY 150.0069
GLY 160.0057
SER 170.0048
LEU 180.0046
LYS 190.0035
LEU 200.0036
SER 210.0049
CYS 220.0064
ALA 230.0091
ALA 240.0090
SER 250.0111
GLY 260.0122
PHE 270.0059
ILE 280.0055
PHE 290.0037
SER 300.0058
ASP 310.0091
TYR 320.0090
TYR 330.0091
MET 340.0037
TYR 350.0030
TRP 360.0027
VAL 370.0037
ARG 380.0038
GLN 390.0051
THR 400.0102
PRO 410.0151
GLU 420.0195
LYS 430.0127
ARG 440.0128
LEU 450.0093
GLU 460.0035
TRP 470.0024
VAL 480.0019
ALA 490.0017
THR 500.0032
ILE 510.0038
SER 520.0072
ASP 520.0101
GLY 530.0120
ASN 540.0107
SER 550.0063
TYR 560.0049
THR 570.0033
TYR 580.0023
TYR 590.0007
VAL 600.0009
ASP 610.0068
SER 620.0070
VAL 630.0049
LYS 640.0053
GLY 650.0047
ARG 660.0044
PHE 670.0036
THR 680.0028
ILE 690.0020
SER 700.0026
ARG 710.0032
ASP 720.0086
ASN 730.0067
ALA 740.0121
LYS 750.0144
ASN 760.0082
ASN 770.0079
LEU 780.0050
TYR 790.0047
LEU 800.0034
GLN 810.0035
MET 820.0044
SER 820.0042
SER 820.0048
LEU 820.0055
LYS 830.0063
SER 840.0071
GLU 850.0082
ASP 860.0064
THR 870.0072
ALA 880.0068
ILE 890.0051
TYR 900.0029
TYR 910.0020
CYS 920.0027
ALA 930.0043
ARG 940.0053
ASP 950.0064
GLY 960.0076
PRO 970.0120
THR 980.0126
ASP 990.0112
SER 1000.0067
SER 1000.0060
GLY 1000.0062
TYR 1000.0061
GLY 1000.0045
GLY 1000.0042
PHE 1000.0029
GLY 1010.0032
TYR 1020.0020
TRP 1030.0038
GLY 1040.0042
GLN 1050.0048
GLY 1060.0050
THR 1070.0026
LEU 1080.0056
VAL 1090.0075
THR 1100.0079
VAL 1110.0072
SER 1120.0057
GLU 1130.0107
ALA 1140.0106
LYS 1150.0142
THR 1160.0119
THR 1170.0069
PRO 1180.0096
PRO 1190.0101
SER 1200.0105
VAL 1210.0086
TYR 1220.0088
PRO 1230.0083
LEU 1240.0067
ALA 1250.0058
PRO 1260.0070
GLY 1270.0205
SER 1280.0457
ALA 1290.0695
ALA 1300.0333
GLN 1330.0373
THR 1340.0225
ASN 1350.0194
SER 1360.0117
MET 1370.0153
VAL 1380.0228
THR 1390.0183
LEU 1400.0136
GLY 1410.0103
CYS 1420.0070
LEU 1430.0065
VAL 1440.0063
LYS 1450.0068
GLY 1460.0057
TYR 1470.0063
PHE 1480.0059
PRO 1490.0070
GLU 1500.0083
PRO 1510.0070
VAL 1520.0068
THR 1530.0062
VAL 1540.0049
THR 1560.0086
TRP 1570.0078
ASN 1620.0080
SER 1630.0187
GLY 1640.0348
SER 1650.0486
LEU 1660.0484
SER 1670.0631
SER 1680.0780
GLY 1690.0423
VAL 1710.0180
HIS 1720.0109
THR 1730.0134
PHE 1740.0094
PRO 1750.0117
ALA 1760.0107
VAL 1770.0081
LEU 1780.0057
GLN 1790.0062
SER 1800.0146
ASP 1830.0052
LEU 1840.0021
TYR 1850.0038
THR 1860.0054
LEU 1870.0064
SER 1880.0066
SER 1890.0071
SER 1900.0118
VAL 1910.0192
THR 1920.0338
VAL 1930.0208
PRO 1940.0122
SER 1950.0115
SER 1960.0322
PRO 1980.0363
ARG 1990.0257
PRO 2000.0388
SER 2020.0779
GLU 2030.0584
THR 2040.0245
VAL 2050.0194
THR 2060.0155
CYS 2080.0075
ASN 2090.0063
VAL 2100.0083
ALA 2110.0130
HIS 2120.0112
PRO 2130.0120
ALA 2140.0132
SER 2150.0121
SER 2160.0161
THR 2170.0155
LYS 2180.0154
VAL 2190.0157
ASP 2200.0086
LYS 2210.0118
LYS 2220.0157
ILE 2230.0143
VAL 2260.0145
PRO 2270.0151
ARG 2280.0211
ASP 2320.0504
CYS 2330.0961

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.