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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 43  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1027
ILE 4790.0542
PHE 4800.0404
ILE 4810.0263
SER 4820.0104
ASP 4830.0124
ASP 4840.0256
LYS 4850.0225
ASP 4860.0337
SER 4870.0329
LEU 4880.0218
LYS 4890.0243
CYS 4900.0091
PRO 4910.0052
CYS 4920.0050
ASP 4930.0094
PRO 4940.0137
GLU 4950.0184
MET 4960.0212
VAL 4970.0180
SER 4980.0053
GLN 4990.0271
SER 5000.0648
THR 5010.0304
CYS 5020.0109
ARG 5030.0176
PHE 5040.0186
PHE 5050.0222
VAL 5060.0155
CYS 5070.0097
LYS 5080.0119
CYS 5090.0119
VAL 5100.0199
GLU 5110.0238
ARG 5120.1027
SER 20.0277
VAL 30.0277
LEU 40.0176
SER 50.0089
GLN 60.0098
SER 70.0157
PRO 80.0181
ALA 90.0164
ILE 100.0145
LEU 110.0103
SER 120.0089
ALA 130.0072
SER 140.0116
PRO 150.0115
GLY 160.0118
GLU 170.0087
LYS 180.0040
VAL 190.0046
THR 200.0141
MET 210.0131
THR 220.0138
CYS 230.0107
ARG 240.0094
ALA 250.0169
ARG 260.0438
SER 270.0439
SER 290.0276
VAL 300.0186
SER 310.0177
TYR 320.0080
MET 330.0077
HIS 340.0086
TRP 350.0083
TYR 360.0064
GLN 370.0059
GLN 380.0055
LYS 390.0108
SER 400.0183
GLY 410.0179
SER 420.0106
SER 430.0045
PRO 440.0050
LYS 450.0055
PRO 460.0074
TRP 470.0074
ILE 480.0086
HIS 490.0087
ALA 500.0105
THR 510.0113
SER 520.0127
ASN 530.0100
LEU 540.0092
ALA 550.0091
SER 560.0164
GLY 570.0179
VAL 580.0126
PRO 590.0077
ALA 600.0106
ARG 610.0073
PHE 620.0079
SER 630.0097
GLY 640.0128
SER 650.0179
GLY 660.0144
SER 670.0174
GLY 680.0244
THR 690.0164
SER 700.0098
TYR 710.0090
SER 720.0118
LEU 730.0137
THR 740.0115
ILE 750.0055
SER 760.0057
ARG 770.0090
VAL 780.0071
GLU 790.0100
ALA 800.0118
GLU 810.0113
ASP 820.0089
ALA 830.0114
ALA 840.0089
THR 850.0085
TYR 860.0059
TYR 870.0067
CYS 880.0084
GLN 890.0074
GLN 900.0053
TRP 910.0045
SER 920.0057
SER 930.0044
HIS 940.0086
PRO 950.0030
PRO 960.0044
THR 970.0079
PHE 980.0078
GLY 990.0086
SER 1000.0105
GLY 1010.0093
THR 1020.0089
LYS 1030.0079
LEU 1040.0101
GLU 1050.0108
ILE 1060.0103
LYS 1070.0110
ARG 1080.0113
ALA 1090.0163
ASP 1100.0097
ALA 1110.0095
ALA 1120.0102
PRO 1130.0102
THR 1140.0095
VAL 1150.0131
SER 1160.0143
ILE 1170.0141
PHE 1180.0124
PRO 1190.0091
PRO 1200.0052
SER 1210.0022
SER 1220.0152
GLU 1230.0144
GLN 1240.0144
LEU 1250.0201
THR 1260.0370
SER 1270.0439
GLY 1280.0297
GLY 1290.0222
ALA 1300.0105
SER 1310.0099
VAL 1320.0118
VAL 1330.0145
CYS 1340.0137
PHE 1350.0105
LEU 1360.0103
ASN 1370.0055
ASN 1380.0032
PHE 1390.0058
TYR 1400.0075
PRO 1410.0099
LYS 1420.0128
ASP 1430.0136
ILE 1440.0111
ASN 1450.0096
VAL 1460.0103
LYS 1470.0048
TRP 1480.0046
LYS 1490.0069
ILE 1500.0043
ASP 1510.0104
GLY 1520.0335
SER 1530.0317
GLU 1540.0335
ARG 1550.0220
GLN 1560.0202
ASN 1570.0242
GLY 1580.0134
VAL 1590.0139
LEU 1600.0180
ASN 1610.0130
SER 1620.0085
TRP 1630.0094
THR 1640.0186
ASP 1650.0251
GLN 1660.0207
ASP 1670.0351
SER 1680.0380
LYS 1690.0505
ASP 1700.0296
SER 1710.0180
THR 1720.0108
TYR 1730.0090
SER 1740.0053
MET 1750.0085
SER 1760.0106
SER 1770.0126
THR 1780.0143
LEU 1790.0136
THR 1800.0109
LEU 1810.0091
THR 1820.0176
LYS 1830.0118
ASP 1840.0092
GLU 1850.0091
TYR 1860.0081
GLU 1870.0049
ARG 1880.0064
HIS 1890.0067
ASN 1900.0079
SER 1910.0103
TYR 1920.0096
THR 1930.0094
CYS 1940.0095
GLU 1950.0064
ALA 1960.0104
THR 1970.0063
HIS 1980.0085
LYS 1990.0075
THR 2000.0126
SER 2010.0233
THR 2020.0339
SER 2030.0179
PRO 2040.0106
ILE 2050.0161
VAL 2060.0107
LYS 2070.0122
SER 2080.0106
PHE 2090.0102
ASN 2100.0093
ARG 2110.0091
ASN 2120.0090
GLU 2130.0067
CYS 2140.0060
GLU 10.0322
VAL 20.0141
GLN 30.0175
LEU 40.0092
VAL 50.0111
GLU 60.0089
SER 70.0062
GLY 80.0044
GLY 90.0048
GLY 100.0114
LEU 110.0113
VAL 120.0115
LYS 130.0141
PRO 140.0162
GLY 150.0144
GLY 160.0112
SER 170.0089
LEU 180.0069
LYS 190.0058
LEU 200.0037
SER 210.0070
CYS 220.0104
ALA 230.0155
ALA 240.0155
SER 250.0217
GLY 260.0226
PHE 270.0101
ILE 280.0083
PHE 290.0055
SER 300.0088
ASP 310.0150
TYR 320.0127
TYR 330.0112
MET 340.0039
TYR 350.0029
TRP 360.0021
VAL 370.0024
ARG 380.0041
GLN 390.0063
THR 400.0110
PRO 410.0201
GLU 420.0259
LYS 430.0181
ARG 440.0149
LEU 450.0080
GLU 460.0058
TRP 470.0031
VAL 480.0032
ALA 490.0047
THR 500.0056
ILE 510.0082
SER 520.0125
ASP 520.0215
GLY 530.0313
ASN 540.0326
SER 550.0231
TYR 560.0222
THR 570.0164
TYR 580.0089
TYR 590.0073
VAL 600.0075
ASP 610.0086
SER 620.0071
VAL 630.0025
LYS 640.0037
GLY 650.0061
ARG 660.0064
PHE 670.0029
THR 680.0023
ILE 690.0017
SER 700.0091
ARG 710.0072
ASP 720.0175
ASN 730.0131
ALA 740.0244
LYS 750.0305
ASN 760.0174
ASN 770.0149
LEU 780.0081
TYR 790.0075
LEU 800.0029
GLN 810.0057
MET 820.0074
SER 820.0088
SER 820.0104
LEU 820.0096
LYS 830.0112
SER 840.0111
GLU 850.0061
ASP 860.0052
THR 870.0054
ALA 880.0054
ILE 890.0053
TYR 900.0035
TYR 910.0034
CYS 920.0028
ALA 930.0014
ARG 940.0053
ASP 950.0057
GLY 960.0069
PRO 970.0122
THR 980.0175
ASP 990.0190
SER 1000.0084
SER 1000.0083
GLY 1000.0091
TYR 1000.0082
GLY 1000.0062
GLY 1000.0049
PHE 1000.0031
GLY 1010.0038
TYR 1020.0031
TRP 1030.0043
GLY 1040.0063
GLN 1050.0070
GLY 1060.0046
THR 1070.0028
LEU 1080.0059
VAL 1090.0079
THR 1100.0096
VAL 1110.0113
SER 1120.0139
GLU 1130.0182
ALA 1140.0168
LYS 1150.0149
THR 1160.0126
THR 1170.0124
PRO 1180.0077
PRO 1190.0079
SER 1200.0082
VAL 1210.0064
TYR 1220.0061
PRO 1230.0035
LEU 1240.0051
ALA 1250.0049
PRO 1260.0064
GLY 1270.0068
SER 1280.0133
ALA 1290.0309
ALA 1300.0249
GLN 1330.0258
THR 1340.0156
ASN 1350.0116
SER 1360.0091
MET 1370.0089
VAL 1380.0081
THR 1390.0075
LEU 1400.0067
GLY 1410.0059
CYS 1420.0059
LEU 1430.0065
VAL 1440.0062
LYS 1450.0080
GLY 1460.0068
TYR 1470.0066
PHE 1480.0085
PRO 1490.0079
GLU 1500.0065
PRO 1510.0075
VAL 1520.0076
THR 1530.0098
VAL 1540.0070
THR 1560.0084
TRP 1570.0074
ASN 1620.0058
SER 1630.0132
GLY 1640.0185
SER 1650.0179
LEU 1660.0186
SER 1670.0267
SER 1680.0322
GLY 1690.0177
VAL 1710.0066
HIS 1720.0048
THR 1730.0049
PHE 1740.0024
PRO 1750.0043
ALA 1760.0008
VAL 1770.0025
LEU 1780.0058
GLN 1790.0159
SER 1800.0274
ASP 1830.0017
LEU 1840.0060
TYR 1850.0073
THR 1860.0072
LEU 1870.0056
SER 1880.0048
SER 1890.0037
SER 1900.0056
VAL 1910.0075
THR 1920.0129
VAL 1930.0085
PRO 1940.0069
SER 1950.0098
SER 1960.0198
PRO 1980.0211
ARG 1990.0153
PRO 2000.0173
SER 2020.0290
GLU 2030.0240
THR 2040.0162
VAL 2050.0072
THR 2060.0061
CYS 2080.0058
ASN 2090.0061
VAL 2100.0064
ALA 2110.0087
HIS 2120.0081
PRO 2130.0083
ALA 2140.0085
SER 2150.0088
SER 2160.0091
THR 2170.0052
LYS 2180.0065
VAL 2190.0054
ASP 2200.0027
LYS 2210.0031
LYS 2220.0049
ILE 2230.0049
VAL 2260.0030
PRO 2270.0048
ARG 2280.0064
ASP 2320.0068
CYS 2330.0383

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.