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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 44  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0774
ILE 4790.0442
PHE 4800.0313
ILE 4810.0280
SER 4820.0188
ASP 4830.0124
ASP 4840.0117
LYS 4850.0089
ASP 4860.0185
SER 4870.0216
LEU 4880.0157
LYS 4890.0145
CYS 4900.0059
PRO 4910.0077
CYS 4920.0090
ASP 4930.0092
PRO 4940.0064
GLU 4950.0102
MET 4960.0137
VAL 4970.0170
SER 4980.0106
GLN 4990.0263
SER 5000.0484
THR 5010.0036
CYS 5020.0191
ARG 5030.0234
PHE 5040.0185
PHE 5050.0137
VAL 5060.0127
CYS 5070.0056
LYS 5080.0069
CYS 5090.0072
VAL 5100.0071
GLU 5110.0085
ARG 5120.0215
SER 20.0088
VAL 30.0109
LEU 40.0071
SER 50.0079
GLN 60.0054
SER 70.0062
PRO 80.0055
ALA 90.0045
ILE 100.0047
LEU 110.0063
SER 120.0077
ALA 130.0098
SER 140.0111
PRO 150.0070
GLY 160.0053
GLU 170.0073
LYS 180.0066
VAL 190.0061
THR 200.0033
MET 210.0047
THR 220.0066
CYS 230.0083
ARG 240.0122
ALA 250.0104
ARG 260.0162
SER 270.0132
SER 290.0155
VAL 300.0124
SER 310.0137
TYR 320.0085
MET 330.0078
HIS 340.0076
TRP 350.0043
TYR 360.0022
GLN 370.0025
GLN 380.0067
LYS 390.0105
SER 400.0151
GLY 410.0281
SER 420.0180
SER 430.0074
PRO 440.0033
LYS 450.0034
PRO 460.0041
TRP 470.0029
ILE 480.0051
HIS 490.0067
ALA 500.0092
THR 510.0085
SER 520.0089
ASN 530.0077
LEU 540.0057
ALA 550.0027
SER 560.0034
GLY 570.0060
VAL 580.0068
PRO 590.0061
ALA 600.0077
ARG 610.0062
PHE 620.0047
SER 630.0047
GLY 640.0060
SER 650.0102
GLY 660.0154
SER 670.0197
GLY 680.0186
THR 690.0166
SER 700.0170
TYR 710.0097
SER 720.0087
LEU 730.0069
THR 740.0030
ILE 750.0038
SER 760.0056
ARG 770.0049
VAL 780.0035
GLU 790.0022
ALA 800.0046
GLU 810.0046
ASP 820.0045
ALA 830.0058
ALA 840.0048
THR 850.0049
TYR 860.0011
TYR 870.0006
CYS 880.0020
GLN 890.0076
GLN 900.0082
TRP 910.0090
SER 920.0098
SER 930.0101
HIS 940.0106
PRO 950.0090
PRO 960.0091
THR 970.0092
PHE 980.0049
GLY 990.0031
SER 1000.0021
GLY 1010.0024
THR 1020.0033
LYS 1030.0039
LEU 1040.0071
GLU 1050.0072
ILE 1060.0083
LYS 1070.0149
ARG 1080.0153
ALA 1090.0149
ASP 1100.0189
ALA 1110.0174
ALA 1120.0165
PRO 1130.0117
THR 1140.0135
VAL 1150.0154
SER 1160.0113
ILE 1170.0141
PHE 1180.0135
PRO 1190.0166
PRO 1200.0107
SER 1210.0102
SER 1220.0303
GLU 1230.0222
GLN 1240.0176
LEU 1250.0277
THR 1260.0511
SER 1270.0531
GLY 1280.0327
GLY 1290.0189
ALA 1300.0036
SER 1310.0101
VAL 1320.0136
VAL 1330.0156
CYS 1340.0149
PHE 1350.0113
LEU 1360.0132
ASN 1370.0097
ASN 1380.0094
PHE 1390.0098
TYR 1400.0118
PRO 1410.0109
LYS 1420.0092
ASP 1430.0137
ILE 1440.0124
ASN 1450.0215
VAL 1460.0274
LYS 1470.0216
TRP 1480.0181
LYS 1490.0122
ILE 1500.0108
ASP 1510.0170
GLY 1520.0384
SER 1530.0284
GLU 1540.0365
ARG 1550.0242
GLN 1560.0269
ASN 1570.0341
GLY 1580.0251
VAL 1590.0260
LEU 1600.0292
ASN 1610.0168
SER 1620.0105
TRP 1630.0058
THR 1640.0043
ASP 1650.0066
GLN 1660.0084
ASP 1670.0092
SER 1680.0114
LYS 1690.0135
ASP 1700.0134
SER 1710.0113
THR 1720.0094
TYR 1730.0061
SER 1740.0079
MET 1750.0097
SER 1760.0144
SER 1770.0181
THR 1780.0212
LEU 1790.0180
THR 1800.0131
LEU 1810.0103
THR 1820.0082
LYS 1830.0055
ASP 1840.0125
GLU 1850.0143
TYR 1860.0154
GLU 1870.0158
ARG 1880.0165
HIS 1890.0137
ASN 1900.0151
SER 1910.0160
TYR 1920.0149
THR 1930.0148
CYS 1940.0205
GLU 1950.0206
ALA 1960.0236
THR 1970.0199
HIS 1980.0117
LYS 1990.0180
THR 2000.0245
SER 2010.0287
THR 2020.0388
SER 2030.0212
PRO 2040.0230
ILE 2050.0264
VAL 2060.0196
LYS 2070.0175
SER 2080.0160
PHE 2090.0189
ASN 2100.0198
ARG 2110.0217
ASN 2120.0412
GLU 2130.0389
CYS 2140.0402
GLU 10.0184
VAL 20.0081
GLN 30.0076
LEU 40.0027
VAL 50.0058
GLU 60.0064
SER 70.0060
GLY 80.0056
GLY 90.0046
GLY 100.0092
LEU 110.0107
VAL 120.0143
LYS 130.0213
PRO 140.0156
GLY 150.0202
GLY 160.0138
SER 170.0100
LEU 180.0059
LYS 190.0043
LEU 200.0042
SER 210.0062
CYS 220.0058
ALA 230.0076
ALA 240.0060
SER 250.0092
GLY 260.0109
PHE 270.0054
ILE 280.0057
PHE 290.0040
SER 300.0077
ASP 310.0094
TYR 320.0098
TYR 330.0101
MET 340.0062
TYR 350.0057
TRP 360.0043
VAL 370.0018
ARG 380.0025
GLN 390.0052
THR 400.0113
PRO 410.0210
GLU 420.0280
LYS 430.0170
ARG 440.0134
LEU 450.0052
GLU 460.0011
TRP 470.0026
VAL 480.0034
ALA 490.0059
THR 500.0071
ILE 510.0077
SER 520.0095
ASP 520.0121
GLY 530.0141
ASN 540.0143
SER 550.0112
TYR 560.0088
THR 570.0079
TYR 580.0054
TYR 590.0051
VAL 600.0059
ASP 610.0133
SER 620.0108
VAL 630.0069
LYS 640.0096
GLY 650.0073
ARG 660.0064
PHE 670.0035
THR 680.0037
ILE 690.0048
SER 700.0095
ARG 710.0071
ASP 720.0114
ASN 730.0097
ALA 740.0149
LYS 750.0162
ASN 760.0079
ASN 770.0075
LEU 780.0045
TYR 790.0054
LEU 800.0028
GLN 810.0037
MET 820.0072
SER 820.0090
SER 820.0117
LEU 820.0112
LYS 830.0135
SER 840.0133
GLU 850.0117
ASP 860.0089
THR 870.0059
ALA 880.0048
ILE 890.0041
TYR 900.0035
TYR 910.0029
CYS 920.0032
ALA 930.0042
ARG 940.0094
ASP 950.0093
GLY 960.0094
PRO 970.0137
THR 980.0131
ASP 990.0119
SER 1000.0083
SER 1000.0081
GLY 1000.0079
TYR 1000.0079
GLY 1000.0080
GLY 1000.0082
PHE 1000.0084
GLY 1010.0086
TYR 1020.0089
TRP 1030.0016
GLY 1040.0019
GLN 1050.0037
GLY 1060.0049
THR 1070.0054
LEU 1080.0054
VAL 1090.0062
THR 1100.0073
VAL 1110.0103
SER 1120.0144
GLU 1130.0219
ALA 1140.0199
LYS 1150.0265
THR 1160.0159
THR 1170.0115
PRO 1180.0096
PRO 1190.0081
SER 1200.0075
VAL 1210.0067
TYR 1220.0076
PRO 1230.0077
LEU 1240.0105
ALA 1250.0143
PRO 1260.0158
GLY 1270.0196
SER 1280.0155
ALA 1290.0291
ALA 1300.0309
GLN 1330.0308
THR 1340.0243
ASN 1350.0132
SER 1360.0325
MET 1370.0285
VAL 1380.0198
THR 1390.0095
LEU 1400.0100
GLY 1410.0093
CYS 1420.0027
LEU 1430.0048
VAL 1440.0063
LYS 1450.0087
GLY 1460.0079
TYR 1470.0086
PHE 1480.0075
PRO 1490.0073
GLU 1500.0112
PRO 1510.0172
VAL 1520.0137
THR 1530.0151
VAL 1540.0123
THR 1560.0152
TRP 1570.0155
ASN 1620.0216
SER 1630.0236
GLY 1640.0267
SER 1650.0261
LEU 1660.0244
SER 1670.0249
SER 1680.0296
GLY 1690.0220
VAL 1710.0087
HIS 1720.0095
THR 1730.0098
PHE 1740.0084
PRO 1750.0108
ALA 1760.0144
VAL 1770.0169
LEU 1780.0123
GLN 1790.0171
SER 1800.0322
ASP 1830.0150
LEU 1840.0128
TYR 1850.0149
THR 1860.0106
LEU 1870.0100
SER 1880.0091
SER 1890.0078
SER 1900.0079
VAL 1910.0079
THR 1920.0239
VAL 1930.0247
PRO 1940.0246
SER 1950.0298
SER 1960.0315
PRO 1980.0333
ARG 1990.0289
PRO 2000.0262
SER 2020.0325
GLU 2030.0272
THR 2040.0264
VAL 2050.0188
THR 2060.0160
CYS 2080.0125
ASN 2090.0115
VAL 2100.0105
ALA 2110.0140
HIS 2120.0117
PRO 2130.0139
ALA 2140.0158
SER 2150.0119
SER 2160.0113
THR 2170.0116
LYS 2180.0106
VAL 2190.0117
ASP 2200.0108
LYS 2210.0126
LYS 2220.0145
ILE 2230.0168
VAL 2260.0306
PRO 2270.0301
ARG 2280.0301
ASP 2320.0535
CYS 2330.0774

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.