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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0653
ILE 4790.0149
PHE 4800.0065
ILE 4810.0152
SER 4820.0163
ASP 4830.0192
ASP 4840.0188
LYS 4850.0105
ASP 4860.0107
SER 4870.0150
LEU 4880.0083
LYS 4890.0101
CYS 4900.0058
PRO 4910.0095
CYS 4920.0092
ASP 4930.0079
PRO 4940.0069
GLU 4950.0105
MET 4960.0131
VAL 4970.0208
SER 4980.0118
GLN 4990.0186
SER 5000.0310
THR 5010.0222
CYS 5020.0090
ARG 5030.0112
PHE 5040.0144
PHE 5050.0168
VAL 5060.0097
CYS 5070.0054
LYS 5080.0088
CYS 5090.0092
VAL 5100.0111
GLU 5110.0110
ARG 5120.0484
SER 20.0145
VAL 30.0092
LEU 40.0035
SER 50.0013
GLN 60.0025
SER 70.0053
PRO 80.0126
ALA 90.0137
ILE 100.0154
LEU 110.0137
SER 120.0136
ALA 130.0130
SER 140.0141
PRO 150.0161
GLY 160.0191
GLU 170.0166
LYS 180.0174
VAL 190.0176
THR 200.0090
MET 210.0093
THR 220.0095
CYS 230.0028
ARG 240.0013
ALA 250.0044
ARG 260.0452
SER 270.0247
SER 290.0147
VAL 300.0114
SER 310.0155
TYR 320.0091
MET 330.0079
HIS 340.0071
TRP 350.0064
TYR 360.0053
GLN 370.0047
GLN 380.0041
LYS 390.0089
SER 400.0196
GLY 410.0310
SER 420.0198
SER 430.0065
PRO 440.0015
LYS 450.0035
PRO 460.0059
TRP 470.0099
ILE 480.0101
HIS 490.0107
ALA 500.0108
THR 510.0127
SER 520.0146
ASN 530.0171
LEU 540.0167
ALA 550.0137
SER 560.0290
GLY 570.0301
VAL 580.0204
PRO 590.0192
ALA 600.0189
ARG 610.0179
PHE 620.0158
SER 630.0161
GLY 640.0162
SER 650.0167
GLY 660.0155
SER 670.0162
GLY 680.0141
THR 690.0087
SER 700.0080
TYR 710.0116
SER 720.0116
LEU 730.0118
THR 740.0168
ILE 750.0166
SER 760.0170
ARG 770.0207
VAL 780.0167
GLU 790.0163
ALA 800.0111
GLU 810.0112
ASP 820.0098
ALA 830.0082
ALA 840.0064
THR 850.0053
TYR 860.0051
TYR 870.0053
CYS 880.0059
GLN 890.0046
GLN 900.0032
TRP 910.0032
SER 920.0037
SER 930.0045
HIS 940.0041
PRO 950.0061
PRO 960.0057
THR 970.0057
PHE 980.0074
GLY 990.0075
SER 1000.0079
GLY 1010.0062
THR 1020.0068
LYS 1030.0094
LEU 1040.0110
GLU 1050.0108
ILE 1060.0098
LYS 1070.0096
ARG 1080.0070
ALA 1090.0042
ASP 1100.0140
ALA 1110.0147
ALA 1120.0149
PRO 1130.0124
THR 1140.0121
VAL 1150.0109
SER 1160.0071
ILE 1170.0090
PHE 1180.0114
PRO 1190.0082
PRO 1200.0065
SER 1210.0068
SER 1220.0172
GLU 1230.0110
GLN 1240.0094
LEU 1250.0159
THR 1260.0299
SER 1270.0330
GLY 1280.0240
GLY 1290.0151
ALA 1300.0032
SER 1310.0075
VAL 1320.0089
VAL 1330.0098
CYS 1340.0086
PHE 1350.0065
LEU 1360.0063
ASN 1370.0080
ASN 1380.0104
PHE 1390.0117
TYR 1400.0118
PRO 1410.0110
LYS 1420.0119
ASP 1430.0134
ILE 1440.0100
ASN 1450.0095
VAL 1460.0088
LYS 1470.0081
TRP 1480.0083
LYS 1490.0107
ILE 1500.0111
ASP 1510.0096
GLY 1520.0183
SER 1530.0168
GLU 1540.0238
ARG 1550.0153
GLN 1560.0158
ASN 1570.0172
GLY 1580.0095
VAL 1590.0095
LEU 1600.0089
ASN 1610.0041
SER 1620.0034
TRP 1630.0054
THR 1640.0089
ASP 1650.0081
GLN 1660.0068
ASP 1670.0065
SER 1680.0056
LYS 1690.0028
ASP 1700.0077
SER 1710.0072
THR 1720.0082
TYR 1730.0087
SER 1740.0078
MET 1750.0061
SER 1760.0048
SER 1770.0058
THR 1780.0076
LEU 1790.0078
THR 1800.0052
LEU 1810.0045
THR 1820.0047
LYS 1830.0057
ASP 1840.0071
GLU 1850.0073
TYR 1860.0073
GLU 1870.0105
ARG 1880.0113
HIS 1890.0102
ASN 1900.0085
SER 1910.0056
TYR 1920.0072
THR 1930.0071
CYS 1940.0075
GLU 1950.0070
ALA 1960.0086
THR 1970.0121
HIS 1980.0131
LYS 1990.0157
THR 2000.0216
SER 2010.0214
THR 2020.0209
SER 2030.0204
PRO 2040.0148
ILE 2050.0142
VAL 2060.0047
LYS 2070.0053
SER 2080.0066
PHE 2090.0096
ASN 2100.0080
ARG 2110.0074
ASN 2120.0093
GLU 2130.0119
CYS 2140.0144
GLU 10.0653
VAL 20.0420
GLN 30.0350
LEU 40.0122
VAL 50.0128
GLU 60.0077
SER 70.0036
GLY 80.0027
GLY 90.0010
GLY 100.0066
LEU 110.0048
VAL 120.0047
LYS 130.0050
PRO 140.0092
GLY 150.0176
GLY 160.0116
SER 170.0099
LEU 180.0093
LYS 190.0089
LEU 200.0075
SER 210.0080
CYS 220.0075
ALA 230.0143
ALA 240.0111
SER 250.0156
GLY 260.0209
PHE 270.0184
ILE 280.0204
PHE 290.0153
SER 300.0248
ASP 310.0176
TYR 320.0147
TYR 330.0126
MET 340.0119
TYR 350.0123
TRP 360.0110
VAL 370.0099
ARG 380.0079
GLN 390.0092
THR 400.0197
PRO 410.0449
GLU 420.0562
LYS 430.0337
ARG 440.0252
LEU 450.0085
GLU 460.0066
TRP 470.0097
VAL 480.0100
ALA 490.0151
THR 500.0154
ILE 510.0146
SER 520.0162
ASP 520.0124
GLY 530.0105
ASN 540.0145
SER 550.0153
TYR 560.0160
THR 570.0195
TYR 580.0159
TYR 590.0173
VAL 600.0189
ASP 610.0317
SER 620.0250
VAL 630.0166
LYS 640.0207
GLY 650.0198
ARG 660.0129
PHE 670.0110
THR 680.0132
ILE 690.0133
SER 700.0177
ARG 710.0194
ASP 720.0305
ASN 730.0366
ALA 740.0500
LYS 750.0427
ASN 760.0201
ASN 770.0181
LEU 780.0108
TYR 790.0116
LEU 800.0099
GLN 810.0100
MET 820.0097
SER 820.0112
SER 820.0109
LEU 820.0079
LYS 830.0084
SER 840.0092
GLU 850.0089
ASP 860.0045
THR 870.0048
ALA 880.0075
ILE 890.0104
TYR 900.0101
TYR 910.0075
CYS 920.0098
ALA 930.0123
ARG 940.0143
ASP 950.0144
GLY 960.0144
PRO 970.0163
THR 980.0173
ASP 990.0178
SER 1000.0136
SER 1000.0131
GLY 1000.0137
TYR 1000.0127
GLY 1000.0109
GLY 1000.0104
PHE 1000.0102
GLY 1010.0102
TYR 1020.0108
TRP 1030.0104
GLY 1040.0091
GLN 1050.0091
GLY 1060.0074
THR 1070.0062
LEU 1080.0057
VAL 1090.0044
THR 1100.0030
VAL 1110.0036
SER 1120.0027
GLU 1130.0114
ALA 1140.0170
LYS 1150.0289
THR 1160.0182
THR 1170.0129
PRO 1180.0080
PRO 1190.0093
SER 1200.0107
VAL 1210.0128
TYR 1220.0122
PRO 1230.0119
LEU 1240.0115
ALA 1250.0113
PRO 1260.0116
GLY 1270.0136
SER 1280.0133
ALA 1290.0170
ALA 1300.0129
GLN 1330.0263
THR 1340.0193
ASN 1350.0090
SER 1360.0208
MET 1370.0183
VAL 1380.0106
THR 1390.0102
LEU 1400.0090
GLY 1410.0096
CYS 1420.0110
LEU 1430.0111
VAL 1440.0113
LYS 1450.0087
GLY 1460.0054
TYR 1470.0047
PHE 1480.0054
PRO 1490.0058
GLU 1500.0080
PRO 1510.0107
VAL 1520.0100
THR 1530.0115
VAL 1540.0143
THR 1560.0222
TRP 1570.0134
ASN 1620.0193
SER 1630.0311
GLY 1640.0496
SER 1650.0597
LEU 1660.0442
SER 1670.0512
SER 1680.0463
GLY 1690.0133
VAL 1710.0061
HIS 1720.0053
THR 1730.0072
PHE 1740.0028
PRO 1750.0032
ALA 1760.0060
VAL 1770.0085
LEU 1780.0071
GLN 1790.0067
SER 1800.0133
ASP 1830.0108
LEU 1840.0058
TYR 1850.0059
THR 1860.0065
LEU 1870.0061
SER 1880.0062
SER 1890.0084
SER 1900.0063
VAL 1910.0044
THR 1920.0157
VAL 1930.0131
PRO 1940.0147
SER 1950.0199
SER 1960.0256
PRO 1980.0138
ARG 1990.0135
PRO 2000.0127
SER 2020.0217
GLU 2030.0189
THR 2040.0205
VAL 2050.0101
THR 2060.0096
CYS 2080.0127
ASN 2090.0161
VAL 2100.0173
ALA 2110.0138
HIS 2120.0104
PRO 2130.0147
ALA 2140.0181
SER 2150.0143
SER 2160.0161
THR 2170.0128
LYS 2180.0173
VAL 2190.0211
ASP 2200.0174
LYS 2210.0162
LYS 2220.0131
ILE 2230.0100
VAL 2260.0107
PRO 2270.0120
ARG 2280.0102
ASP 2320.0191
CYS 2330.0165

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.