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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0757
ILE 4790.0244
PHE 4800.0186
ILE 4810.0137
SER 4820.0104
ASP 4830.0130
ASP 4840.0162
LYS 4850.0111
ASP 4860.0140
SER 4870.0160
LEU 4880.0100
LYS 4890.0079
CYS 4900.0070
PRO 4910.0057
CYS 4920.0071
ASP 4930.0069
PRO 4940.0101
GLU 4950.0135
MET 4960.0168
VAL 4970.0204
SER 4980.0118
GLN 4990.0202
SER 5000.0334
THR 5010.0159
CYS 5020.0246
ARG 5030.0218
PHE 5040.0189
PHE 5050.0178
VAL 5060.0115
CYS 5070.0089
LYS 5080.0091
CYS 5090.0062
VAL 5100.0070
GLU 5110.0098
ARG 5120.0574
SER 20.0091
VAL 30.0052
LEU 40.0071
SER 50.0082
GLN 60.0069
SER 70.0056
PRO 80.0046
ALA 90.0016
ILE 100.0025
LEU 110.0053
SER 120.0079
ALA 130.0093
SER 140.0120
PRO 150.0147
GLY 160.0162
GLU 170.0154
LYS 180.0125
VAL 190.0092
THR 200.0031
MET 210.0038
THR 220.0062
CYS 230.0070
ARG 240.0067
ALA 250.0071
ARG 260.0094
SER 270.0137
SER 290.0122
VAL 300.0105
SER 310.0106
TYR 320.0062
MET 330.0057
HIS 340.0052
TRP 350.0042
TYR 360.0043
GLN 370.0042
GLN 380.0025
LYS 390.0033
SER 400.0073
GLY 410.0145
SER 420.0111
SER 430.0068
PRO 440.0022
LYS 450.0040
PRO 460.0051
TRP 470.0057
ILE 480.0047
HIS 490.0043
ALA 500.0050
THR 510.0058
SER 520.0061
ASN 530.0051
LEU 540.0053
ALA 550.0058
SER 560.0123
GLY 570.0138
VAL 580.0080
PRO 590.0076
ALA 600.0071
ARG 610.0076
PHE 620.0040
SER 630.0039
GLY 640.0044
SER 650.0075
GLY 660.0081
SER 670.0091
GLY 680.0112
THR 690.0095
SER 700.0093
TYR 710.0053
SER 720.0050
LEU 730.0050
THR 740.0053
ILE 750.0067
SER 760.0101
ARG 770.0123
VAL 780.0106
GLU 790.0115
ALA 800.0055
GLU 810.0069
ASP 820.0075
ALA 830.0077
ALA 840.0032
THR 850.0017
TYR 860.0046
TYR 870.0060
CYS 880.0068
GLN 890.0058
GLN 900.0067
TRP 910.0061
SER 920.0073
SER 930.0098
HIS 940.0104
PRO 950.0074
PRO 960.0070
THR 970.0084
PHE 980.0101
GLY 990.0129
SER 1000.0145
GLY 1010.0064
THR 1020.0030
LYS 1030.0018
LEU 1040.0060
GLU 1050.0069
ILE 1060.0071
LYS 1070.0068
ARG 1080.0124
ALA 1090.0186
ASP 1100.0153
ALA 1110.0095
ALA 1120.0052
PRO 1130.0100
THR 1140.0123
VAL 1150.0162
SER 1160.0099
ILE 1170.0088
PHE 1180.0080
PRO 1190.0054
PRO 1200.0050
SER 1210.0041
SER 1220.0113
GLU 1230.0090
GLN 1240.0090
LEU 1250.0153
THR 1260.0213
SER 1270.0204
GLY 1280.0163
GLY 1290.0116
ALA 1300.0082
SER 1310.0063
VAL 1320.0076
VAL 1330.0087
CYS 1340.0095
PHE 1350.0098
LEU 1360.0102
ASN 1370.0070
ASN 1380.0053
PHE 1390.0047
TYR 1400.0060
PRO 1410.0087
LYS 1420.0112
ASP 1430.0136
ILE 1440.0126
ASN 1450.0170
VAL 1460.0177
LYS 1470.0172
TRP 1480.0160
LYS 1490.0187
ILE 1500.0154
ASP 1510.0140
GLY 1520.0187
SER 1530.0241
GLU 1540.0215
ARG 1550.0187
GLN 1560.0148
ASN 1570.0133
GLY 1580.0056
VAL 1590.0077
LEU 1600.0090
ASN 1610.0075
SER 1620.0078
TRP 1630.0083
THR 1640.0109
ASP 1650.0137
GLN 1660.0112
ASP 1670.0207
SER 1680.0224
LYS 1690.0302
ASP 1700.0204
SER 1710.0116
THR 1720.0077
TYR 1730.0072
SER 1740.0077
MET 1750.0095
SER 1760.0082
SER 1770.0083
THR 1780.0088
LEU 1790.0096
THR 1800.0081
LEU 1810.0068
THR 1820.0081
LYS 1830.0108
ASP 1840.0105
GLU 1850.0118
TYR 1860.0111
GLU 1870.0103
ARG 1880.0100
HIS 1890.0116
ASN 1900.0094
SER 1910.0115
TYR 1920.0147
THR 1930.0185
CYS 1940.0215
GLU 1950.0213
ALA 1960.0193
THR 1970.0203
HIS 1980.0135
LYS 1990.0155
THR 2000.0150
SER 2010.0123
THR 2020.0287
SER 2030.0288
PRO 2040.0268
ILE 2050.0235
VAL 2060.0225
LYS 2070.0203
SER 2080.0177
PHE 2090.0090
ASN 2100.0082
ARG 2110.0078
ASN 2120.0291
GLU 2130.0357
CYS 2140.0431
GLU 10.0757
VAL 20.0346
GLN 30.0354
LEU 40.0164
VAL 50.0145
GLU 60.0084
SER 70.0081
GLY 80.0102
GLY 90.0181
GLY 100.0283
LEU 110.0242
VAL 120.0258
LYS 130.0297
PRO 140.0215
GLY 150.0243
GLY 160.0202
SER 170.0198
LEU 180.0201
LYS 190.0077
LEU 200.0099
SER 210.0099
CYS 220.0151
ALA 230.0199
ALA 240.0194
SER 250.0092
GLY 260.0201
PHE 270.0187
ILE 280.0087
PHE 290.0042
SER 300.0108
ASP 310.0050
TYR 320.0034
TYR 330.0072
MET 340.0067
TYR 350.0062
TRP 360.0064
VAL 370.0068
ARG 380.0095
GLN 390.0152
THR 400.0238
PRO 410.0389
GLU 420.0460
LYS 430.0329
ARG 440.0277
LEU 450.0171
GLU 460.0101
TRP 470.0083
VAL 480.0064
ALA 490.0070
THR 500.0069
ILE 510.0071
SER 520.0061
ASP 520.0074
GLY 530.0081
ASN 540.0074
SER 550.0091
TYR 560.0065
THR 570.0072
TYR 580.0063
TYR 590.0055
VAL 600.0056
ASP 610.0060
SER 620.0098
VAL 630.0106
LYS 640.0089
GLY 650.0136
ARG 660.0170
PHE 670.0118
THR 680.0068
ILE 690.0063
SER 700.0079
ARG 710.0142
ASP 720.0240
ASN 730.0243
ALA 740.0356
LYS 750.0372
ASN 760.0205
ASN 770.0209
LEU 780.0159
TYR 790.0113
LEU 800.0101
GLN 810.0079
MET 820.0200
SER 820.0212
SER 820.0232
LEU 820.0239
LYS 830.0255
SER 840.0268
GLU 850.0217
ASP 860.0213
THR 870.0242
ALA 880.0206
ILE 890.0184
TYR 900.0127
TYR 910.0028
CYS 920.0038
ALA 930.0078
ARG 940.0069
ASP 950.0065
GLY 960.0095
PRO 970.0149
THR 980.0163
ASP 990.0169
SER 1000.0089
SER 1000.0071
GLY 1000.0057
TYR 1000.0052
GLY 1000.0045
GLY 1000.0061
PHE 1000.0069
GLY 1010.0080
TYR 1020.0088
TRP 1030.0046
GLY 1040.0051
GLN 1050.0073
GLY 1060.0130
THR 1070.0126
LEU 1080.0199
VAL 1090.0238
THR 1100.0223
VAL 1110.0211
SER 1120.0095
GLU 1130.0273
ALA 1140.0201
LYS 1150.0231
THR 1160.0087
THR 1170.0044
PRO 1180.0079
PRO 1190.0101
SER 1200.0103
VAL 1210.0076
TYR 1220.0069
PRO 1230.0066
LEU 1240.0030
ALA 1250.0051
PRO 1260.0082
GLY 1270.0207
SER 1280.0276
ALA 1290.0295
ALA 1300.0220
GLN 1330.0308
THR 1340.0321
ASN 1350.0381
SER 1360.0230
MET 1370.0201
VAL 1380.0184
THR 1390.0054
LEU 1400.0043
GLY 1410.0044
CYS 1420.0073
LEU 1430.0075
VAL 1440.0088
LYS 1450.0114
GLY 1460.0098
TYR 1470.0097
PHE 1480.0053
PRO 1490.0066
GLU 1500.0127
PRO 1510.0148
VAL 1520.0125
THR 1530.0121
VAL 1540.0134
THR 1560.0193
TRP 1570.0144
ASN 1620.0202
SER 1630.0258
GLY 1640.0361
SER 1650.0395
LEU 1660.0276
SER 1670.0290
SER 1680.0195
GLY 1690.0040
VAL 1710.0041
HIS 1720.0030
THR 1730.0038
PHE 1740.0070
PRO 1750.0076
ALA 1760.0110
VAL 1770.0166
LEU 1780.0160
GLN 1790.0152
SER 1800.0215
ASP 1830.0164
LEU 1840.0137
TYR 1850.0164
THR 1860.0094
LEU 1870.0085
SER 1880.0071
SER 1890.0009
SER 1900.0017
VAL 1910.0024
THR 1920.0091
VAL 1930.0127
PRO 1940.0178
SER 1950.0189
SER 1960.0236
PRO 1980.0201
ARG 1990.0127
PRO 2000.0049
SER 2020.0104
GLU 2030.0244
THR 2040.0230
VAL 2050.0123
THR 2060.0118
CYS 2080.0114
ASN 2090.0132
VAL 2100.0143
ALA 2110.0102
HIS 2120.0097
PRO 2130.0106
ALA 2140.0087
SER 2150.0068
SER 2160.0071
THR 2170.0124
LYS 2180.0126
VAL 2190.0140
ASP 2200.0107
LYS 2210.0102
LYS 2220.0101
ILE 2230.0070
VAL 2260.0163
PRO 2270.0164
ARG 2280.0185
ASP 2320.0568
CYS 2330.0706

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.