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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1760
ILE 4790.0370
PHE 4800.0291
ILE 4810.0230
SER 4820.0143
ASP 4830.0167
ASP 4840.0167
LYS 4850.0149
ASP 4860.0194
SER 4870.0197
LEU 4880.0115
LYS 4890.0174
CYS 4900.0095
PRO 4910.0080
CYS 4920.0041
ASP 4930.0090
PRO 4940.0115
GLU 4950.0154
MET 4960.0196
VAL 4970.0230
SER 4980.0106
GLN 4990.0137
SER 5000.0522
THR 5010.0232
CYS 5020.0120
ARG 5030.0220
PHE 5040.0225
PHE 5050.0246
VAL 5060.0170
CYS 5070.0090
LYS 5080.0094
CYS 5090.0117
VAL 5100.0199
GLU 5110.0265
ARG 5120.1760
SER 20.0131
VAL 30.0072
LEU 40.0040
SER 50.0076
GLN 60.0097
SER 70.0156
PRO 80.0162
ALA 90.0138
ILE 100.0112
LEU 110.0091
SER 120.0052
ALA 130.0054
SER 140.0092
PRO 150.0104
GLY 160.0144
GLU 170.0102
LYS 180.0096
VAL 190.0063
THR 200.0118
MET 210.0120
THR 220.0139
CYS 230.0098
ARG 240.0108
ALA 250.0074
ARG 260.0048
SER 270.0192
SER 290.0202
VAL 300.0180
SER 310.0185
TYR 320.0108
MET 330.0091
HIS 340.0076
TRP 350.0037
TYR 360.0040
GLN 370.0043
GLN 380.0067
LYS 390.0099
SER 400.0137
GLY 410.0129
SER 420.0077
SER 430.0076
PRO 440.0072
LYS 450.0061
PRO 460.0063
TRP 470.0059
ILE 480.0049
HIS 490.0060
ALA 500.0092
THR 510.0065
SER 520.0054
ASN 530.0056
LEU 540.0064
ALA 550.0090
SER 560.0148
GLY 570.0163
VAL 580.0124
PRO 590.0128
ALA 600.0135
ARG 610.0135
PHE 620.0082
SER 630.0066
GLY 640.0073
SER 650.0107
GLY 660.0166
SER 670.0237
GLY 680.0245
THR 690.0177
SER 700.0188
TYR 710.0095
SER 720.0097
LEU 730.0094
THR 740.0111
ILE 750.0094
SER 760.0114
ARG 770.0152
VAL 780.0097
GLU 790.0095
ALA 800.0066
GLU 810.0085
ASP 820.0084
ALA 830.0075
ALA 840.0068
THR 850.0065
TYR 860.0036
TYR 870.0037
CYS 880.0048
GLN 890.0105
GLN 900.0115
TRP 910.0122
SER 920.0137
SER 930.0196
HIS 940.0226
PRO 950.0129
PRO 960.0135
THR 970.0154
PHE 980.0057
GLY 990.0014
SER 1000.0040
GLY 1010.0070
THR 1020.0083
LYS 1030.0075
LEU 1040.0073
GLU 1050.0055
ILE 1060.0052
LYS 1070.0077
ARG 1080.0072
ALA 1090.0078
ASP 1100.0076
ALA 1110.0057
ALA 1120.0049
PRO 1130.0030
THR 1140.0042
VAL 1150.0057
SER 1160.0083
ILE 1170.0080
PHE 1180.0083
PRO 1190.0069
PRO 1200.0069
SER 1210.0052
SER 1220.0043
GLU 1230.0049
GLN 1240.0062
LEU 1250.0065
THR 1260.0072
SER 1270.0096
GLY 1280.0099
GLY 1290.0093
ALA 1300.0071
SER 1310.0060
VAL 1320.0059
VAL 1330.0070
CYS 1340.0059
PHE 1350.0049
LEU 1360.0039
ASN 1370.0041
ASN 1380.0040
PHE 1390.0045
TYR 1400.0073
PRO 1410.0082
LYS 1420.0083
ASP 1430.0072
ILE 1440.0041
ASN 1450.0051
VAL 1460.0043
LYS 1470.0031
TRP 1480.0022
LYS 1490.0024
ILE 1500.0025
ASP 1510.0018
GLY 1520.0125
SER 1530.0145
GLU 1540.0158
ARG 1550.0076
GLN 1560.0076
ASN 1570.0078
GLY 1580.0069
VAL 1590.0059
LEU 1600.0055
ASN 1610.0022
SER 1620.0024
TRP 1630.0027
THR 1640.0047
ASP 1650.0060
GLN 1660.0058
ASP 1670.0057
SER 1680.0071
LYS 1690.0079
ASP 1700.0067
SER 1710.0058
THR 1720.0058
TYR 1730.0046
SER 1740.0037
MET 1750.0036
SER 1760.0030
SER 1770.0025
THR 1780.0025
LEU 1790.0055
THR 1800.0056
LEU 1810.0055
THR 1820.0087
LYS 1830.0076
ASP 1840.0072
GLU 1850.0062
TYR 1860.0061
GLU 1870.0058
ARG 1880.0056
HIS 1890.0046
ASN 1900.0047
SER 1910.0034
TYR 1920.0052
THR 1930.0066
CYS 1940.0067
GLU 1950.0065
ALA 1960.0067
THR 1970.0063
HIS 1980.0040
LYS 1990.0034
THR 2000.0057
SER 2010.0112
THR 2020.0245
SER 2030.0102
PRO 2040.0086
ILE 2050.0043
VAL 2060.0072
LYS 2070.0081
SER 2080.0081
PHE 2090.0077
ASN 2100.0054
ARG 2110.0053
ASN 2120.0091
GLU 2130.0101
CYS 2140.0109
GLU 10.0746
VAL 20.0182
GLN 30.0310
LEU 40.0062
VAL 50.0038
GLU 60.0019
SER 70.0084
GLY 80.0089
GLY 90.0088
GLY 100.0145
LEU 110.0129
VAL 120.0167
LYS 130.0194
PRO 140.0222
GLY 150.0258
GLY 160.0164
SER 170.0147
LEU 180.0133
LYS 190.0044
LEU 200.0044
SER 210.0048
CYS 220.0014
ALA 230.0071
ALA 240.0083
SER 250.0242
GLY 260.0190
PHE 270.0124
ILE 280.0294
PHE 290.0238
SER 300.0297
ASP 310.0292
TYR 320.0216
TYR 330.0137
MET 340.0092
TYR 350.0078
TRP 360.0067
VAL 370.0087
ARG 380.0084
GLN 390.0071
THR 400.0116
PRO 410.0114
GLU 420.0182
LYS 430.0112
ARG 440.0124
LEU 450.0091
GLU 460.0076
TRP 470.0091
VAL 480.0099
ALA 490.0065
THR 500.0052
ILE 510.0062
SER 520.0105
ASP 520.0242
GLY 530.0310
ASN 540.0266
SER 550.0201
TYR 560.0154
THR 570.0117
TYR 580.0098
TYR 590.0106
VAL 600.0139
ASP 610.0261
SER 620.0192
VAL 630.0106
LYS 640.0161
GLY 650.0190
ARG 660.0131
PHE 670.0075
THR 680.0084
ILE 690.0072
SER 700.0121
ARG 710.0151
ASP 720.0213
ASN 730.0318
ALA 740.0397
LYS 750.0290
ASN 760.0187
ASN 770.0124
LEU 780.0060
TYR 790.0043
LEU 800.0053
GLN 810.0070
MET 820.0136
SER 820.0137
SER 820.0131
LEU 820.0134
LYS 830.0126
SER 840.0137
GLU 850.0126
ASP 860.0126
THR 870.0134
ALA 880.0092
ILE 890.0090
TYR 900.0095
TYR 910.0077
CYS 920.0073
ALA 930.0086
ARG 940.0104
ASP 950.0119
GLY 960.0173
PRO 970.0173
THR 980.0170
ASP 990.0194
SER 1000.0102
SER 1000.0085
GLY 1000.0076
TYR 1000.0082
GLY 1000.0081
GLY 1000.0081
PHE 1000.0078
GLY 1010.0088
TYR 1020.0094
TRP 1030.0086
GLY 1040.0072
GLN 1050.0090
GLY 1060.0091
THR 1070.0093
LEU 1080.0095
VAL 1090.0144
THR 1100.0139
VAL 1110.0164
SER 1120.0180
GLU 1130.0166
ALA 1140.0188
LYS 1150.0254
THR 1160.0132
THR 1170.0134
PRO 1180.0090
PRO 1190.0036
SER 1200.0025
VAL 1210.0031
TYR 1220.0039
PRO 1230.0038
LEU 1240.0063
ALA 1250.0060
PRO 1260.0067
GLY 1270.0079
SER 1280.0121
ALA 1290.0196
ALA 1300.0132
GLN 1330.0165
THR 1340.0139
ASN 1350.0085
SER 1360.0094
MET 1370.0092
VAL 1380.0076
THR 1390.0059
LEU 1400.0057
GLY 1410.0063
CYS 1420.0048
LEU 1430.0046
VAL 1440.0045
LYS 1450.0040
GLY 1460.0042
TYR 1470.0041
PHE 1480.0073
PRO 1490.0057
GLU 1500.0046
PRO 1510.0041
VAL 1520.0042
THR 1530.0067
VAL 1540.0079
THR 1560.0124
TRP 1570.0086
ASN 1620.0097
SER 1630.0208
GLY 1640.0291
SER 1650.0307
LEU 1660.0237
SER 1670.0314
SER 1680.0300
GLY 1690.0111
VAL 1710.0063
HIS 1720.0064
THR 1730.0079
PHE 1740.0047
PRO 1750.0037
ALA 1760.0028
VAL 1770.0073
LEU 1780.0138
GLN 1790.0218
SER 1800.0577
ASP 1830.0117
LEU 1840.0073
TYR 1850.0058
THR 1860.0046
LEU 1870.0050
SER 1880.0073
SER 1890.0073
SER 1900.0049
VAL 1910.0021
THR 1920.0093
VAL 1930.0086
PRO 1940.0087
SER 1950.0115
SER 1960.0179
PRO 1980.0133
ARG 1990.0086
PRO 2000.0045
SER 2020.0047
GLU 2030.0053
THR 2040.0079
VAL 2050.0031
THR 2060.0031
CYS 2080.0067
ASN 2090.0080
VAL 2100.0071
ALA 2110.0040
HIS 2120.0049
PRO 2130.0120
ALA 2140.0124
SER 2150.0167
SER 2160.0187
THR 2170.0068
LYS 2180.0031
VAL 2190.0036
ASP 2200.0067
LYS 2210.0048
LYS 2220.0033
ILE 2230.0040
VAL 2260.0041
PRO 2270.0046
ARG 2280.0045
ASP 2320.0148
CYS 2330.0172

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.