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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0785
ILE 4790.0231
PHE 4800.0170
ILE 4810.0146
SER 4820.0114
ASP 4830.0094
ASP 4840.0113
LYS 4850.0084
ASP 4860.0109
SER 4870.0114
LEU 4880.0074
LYS 4890.0061
CYS 4900.0075
PRO 4910.0087
CYS 4920.0084
ASP 4930.0057
PRO 4940.0074
GLU 4950.0109
MET 4960.0141
VAL 4970.0167
SER 4980.0101
GLN 4990.0170
SER 5000.0261
THR 5010.0155
CYS 5020.0227
ARG 5030.0198
PHE 5040.0159
PHE 5050.0143
VAL 5060.0090
CYS 5070.0069
LYS 5080.0084
CYS 5090.0072
VAL 5100.0091
GLU 5110.0136
ARG 5120.0510
SER 20.0117
VAL 30.0069
LEU 40.0017
SER 50.0072
GLN 60.0078
SER 70.0101
PRO 80.0124
ALA 90.0116
ILE 100.0084
LEU 110.0045
SER 120.0020
ALA 130.0053
SER 140.0093
PRO 150.0120
GLY 160.0164
GLU 170.0140
LYS 180.0145
VAL 190.0119
THR 200.0081
MET 210.0086
THR 220.0100
CYS 230.0042
ARG 240.0022
ALA 250.0050
ARG 260.0119
SER 270.0161
SER 290.0139
VAL 300.0109
SER 310.0093
TYR 320.0046
MET 330.0048
HIS 340.0049
TRP 350.0040
TYR 360.0053
GLN 370.0059
GLN 380.0046
LYS 390.0037
SER 400.0106
GLY 410.0106
SER 420.0068
SER 430.0041
PRO 440.0050
LYS 450.0051
PRO 460.0060
TRP 470.0113
ILE 480.0092
HIS 490.0092
ALA 500.0070
THR 510.0057
SER 520.0096
ASN 530.0175
LEU 540.0185
ALA 550.0180
SER 560.0425
GLY 570.0415
VAL 580.0243
PRO 590.0142
ALA 600.0125
ARG 610.0123
PHE 620.0102
SER 630.0094
GLY 640.0086
SER 650.0012
GLY 660.0041
SER 670.0090
GLY 680.0127
THR 690.0087
SER 700.0064
TYR 710.0017
SER 720.0040
LEU 730.0047
THR 740.0123
ILE 750.0117
SER 760.0139
ARG 770.0173
VAL 780.0118
GLU 790.0102
ALA 800.0047
GLU 810.0047
ASP 820.0047
ALA 830.0034
ALA 840.0003
THR 850.0032
TYR 860.0044
TYR 870.0041
CYS 880.0035
GLN 890.0054
GLN 900.0063
TRP 910.0061
SER 920.0083
SER 930.0106
HIS 940.0122
PRO 950.0081
PRO 960.0073
THR 970.0082
PHE 980.0050
GLY 990.0070
SER 1000.0082
GLY 1010.0085
THR 1020.0067
LYS 1030.0049
LEU 1040.0044
GLU 1050.0035
ILE 1060.0030
LYS 1070.0050
ARG 1080.0051
ALA 1090.0080
ASP 1100.0155
ALA 1110.0116
ALA 1120.0127
PRO 1130.0080
THR 1140.0025
VAL 1150.0034
SER 1160.0113
ILE 1170.0133
PHE 1180.0132
PRO 1190.0201
PRO 1200.0193
SER 1210.0204
SER 1220.0302
GLU 1230.0254
GLN 1240.0224
LEU 1250.0253
THR 1260.0320
SER 1270.0273
GLY 1280.0213
GLY 1290.0176
ALA 1300.0167
SER 1310.0141
VAL 1320.0138
VAL 1330.0134
CYS 1340.0043
PHE 1350.0036
LEU 1360.0039
ASN 1370.0060
ASN 1380.0069
PHE 1390.0100
TYR 1400.0139
PRO 1410.0178
LYS 1420.0210
ASP 1430.0242
ILE 1440.0142
ASN 1450.0100
VAL 1460.0051
LYS 1470.0049
TRP 1480.0066
LYS 1490.0120
ILE 1500.0119
ASP 1510.0179
GLY 1520.0360
SER 1530.0323
GLU 1540.0270
ARG 1550.0081
GLN 1560.0058
ASN 1570.0079
GLY 1580.0084
VAL 1590.0082
LEU 1600.0084
ASN 1610.0107
SER 1620.0113
TRP 1630.0131
THR 1640.0172
ASP 1650.0175
GLN 1660.0145
ASP 1670.0192
SER 1680.0173
LYS 1690.0158
ASP 1700.0086
SER 1710.0085
THR 1720.0105
TYR 1730.0141
SER 1740.0112
MET 1750.0099
SER 1760.0050
SER 1770.0064
THR 1780.0077
LEU 1790.0100
THR 1800.0099
LEU 1810.0097
THR 1820.0086
LYS 1830.0111
ASP 1840.0030
GLU 1850.0055
TYR 1860.0096
GLU 1870.0080
ARG 1880.0106
HIS 1890.0150
ASN 1900.0193
SER 1910.0207
TYR 1920.0201
THR 1930.0216
CYS 1940.0125
GLU 1950.0085
ALA 1960.0076
THR 1970.0060
HIS 1980.0114
LYS 1990.0159
THR 2000.0210
SER 2010.0261
THR 2020.0319
SER 2030.0159
PRO 2040.0064
ILE 2050.0062
VAL 2060.0108
LYS 2070.0153
SER 2080.0192
PHE 2090.0264
ASN 2100.0224
ARG 2110.0165
ASN 2120.0267
GLU 2130.0318
CYS 2140.0367
GLU 10.0228
VAL 20.0121
GLN 30.0103
LEU 40.0064
VAL 50.0064
GLU 60.0061
SER 70.0060
GLY 80.0051
GLY 90.0054
GLY 100.0084
LEU 110.0090
VAL 120.0077
LYS 130.0134
PRO 140.0162
GLY 150.0247
GLY 160.0180
SER 170.0150
LEU 180.0099
LYS 190.0038
LEU 200.0031
SER 210.0036
CYS 220.0060
ALA 230.0058
ALA 240.0055
SER 250.0104
GLY 260.0123
PHE 270.0079
ILE 280.0055
PHE 290.0058
SER 300.0075
ASP 310.0055
TYR 320.0064
TYR 330.0091
MET 340.0075
TYR 350.0075
TRP 360.0066
VAL 370.0053
ARG 380.0054
GLN 390.0086
THR 400.0124
PRO 410.0190
GLU 420.0229
LYS 430.0177
ARG 440.0160
LEU 450.0111
GLU 460.0103
TRP 470.0099
VAL 480.0078
ALA 490.0106
THR 500.0116
ILE 510.0116
SER 520.0136
ASP 520.0116
GLY 530.0114
ASN 540.0137
SER 550.0141
TYR 560.0144
THR 570.0151
TYR 580.0119
TYR 590.0097
VAL 600.0104
ASP 610.0114
SER 620.0151
VAL 630.0097
LYS 640.0061
GLY 650.0101
ARG 660.0134
PHE 670.0051
THR 680.0030
ILE 690.0057
SER 700.0103
ARG 710.0083
ASP 720.0087
ASN 730.0106
ALA 740.0132
LYS 750.0105
ASN 760.0045
ASN 770.0042
LEU 780.0056
TYR 790.0031
LEU 800.0030
GLN 810.0025
MET 820.0134
SER 820.0190
SER 820.0226
LEU 820.0183
LYS 830.0230
SER 840.0223
GLU 850.0197
ASP 860.0140
THR 870.0124
ALA 880.0075
ILE 890.0069
TYR 900.0044
TYR 910.0048
CYS 920.0050
ALA 930.0063
ARG 940.0057
ASP 950.0037
GLY 960.0047
PRO 970.0106
THR 980.0173
ASP 990.0238
SER 1000.0095
SER 1000.0063
GLY 1000.0042
TYR 1000.0042
GLY 1000.0035
GLY 1000.0058
PHE 1000.0060
GLY 1010.0062
TYR 1020.0058
TRP 1030.0043
GLY 1040.0050
GLN 1050.0053
GLY 1060.0063
THR 1070.0057
LEU 1080.0057
VAL 1090.0064
THR 1100.0091
VAL 1110.0100
SER 1120.0167
GLU 1130.0278
ALA 1140.0277
LYS 1150.0242
THR 1160.0183
THR 1170.0136
PRO 1180.0137
PRO 1190.0104
SER 1200.0211
VAL 1210.0239
TYR 1220.0230
PRO 1230.0242
LEU 1240.0157
ALA 1250.0094
PRO 1260.0046
GLY 1270.0113
SER 1280.0339
ALA 1290.0594
ALA 1300.0241
GLN 1330.0131
THR 1340.0280
ASN 1350.0347
SER 1360.0276
MET 1370.0197
VAL 1380.0107
THR 1390.0087
LEU 1400.0114
GLY 1410.0142
CYS 1420.0194
LEU 1430.0196
VAL 1440.0177
LYS 1450.0163
GLY 1460.0105
TYR 1470.0042
PHE 1480.0095
PRO 1490.0126
GLU 1500.0118
PRO 1510.0179
VAL 1520.0108
THR 1530.0175
VAL 1540.0217
THR 1560.0248
TRP 1570.0109
ASN 1620.0075
SER 1630.0184
GLY 1640.0431
SER 1650.0613
LEU 1660.0513
SER 1670.0738
SER 1680.0785
GLY 1690.0308
VAL 1710.0177
HIS 1720.0177
THR 1730.0209
PHE 1740.0129
PRO 1750.0139
ALA 1760.0144
VAL 1770.0158
LEU 1780.0087
GLN 1790.0056
SER 1800.0280
ASP 1830.0159
LEU 1840.0063
TYR 1850.0054
THR 1860.0140
LEU 1870.0143
SER 1880.0158
SER 1890.0152
SER 1900.0098
VAL 1910.0032
THR 1920.0125
VAL 1930.0119
PRO 1940.0126
SER 1950.0182
SER 1960.0312
PRO 1980.0291
ARG 1990.0218
PRO 2000.0180
SER 2020.0210
GLU 2030.0288
THR 2040.0314
VAL 2050.0170
THR 2060.0174
CYS 2080.0210
ASN 2090.0220
VAL 2100.0234
ALA 2110.0115
HIS 2120.0068
PRO 2130.0181
ALA 2140.0234
SER 2150.0231
SER 2160.0243
THR 2170.0106
LYS 2180.0144
VAL 2190.0218
ASP 2200.0276
LYS 2210.0267
LYS 2220.0218
ILE 2230.0210
VAL 2260.0234
PRO 2270.0167
ARG 2280.0100
ASP 2320.0440
CYS 2330.0627

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.