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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0864
ILE 4790.0199
PHE 4800.0173
ILE 4810.0185
SER 4820.0238
ASP 4830.0314
ASP 4840.0367
LYS 4850.0276
ASP 4860.0257
SER 4870.0235
LEU 4880.0133
LYS 4890.0109
CYS 4900.0122
PRO 4910.0036
CYS 4920.0076
ASP 4930.0105
PRO 4940.0234
GLU 4950.0264
MET 4960.0282
VAL 4970.0280
SER 4980.0204
GLN 4990.0086
SER 5000.0446
THR 5010.0532
CYS 5020.0410
ARG 5030.0331
PHE 5040.0299
PHE 5050.0350
VAL 5060.0198
CYS 5070.0170
LYS 5080.0184
CYS 5090.0071
VAL 5100.0053
GLU 5110.0086
ARG 5120.0610
SER 20.0074
VAL 30.0107
LEU 40.0113
SER 50.0155
GLN 60.0161
SER 70.0165
PRO 80.0193
ALA 90.0176
ILE 100.0133
LEU 110.0107
SER 120.0121
ALA 130.0115
SER 140.0148
PRO 150.0139
GLY 160.0146
GLU 170.0126
LYS 180.0099
VAL 190.0147
THR 200.0138
MET 210.0144
THR 220.0156
CYS 230.0134
ARG 240.0107
ALA 250.0090
ARG 260.0119
SER 270.0117
SER 290.0068
VAL 300.0039
SER 310.0049
TYR 320.0030
MET 330.0039
HIS 340.0079
TRP 350.0123
TYR 360.0121
GLN 370.0113
GLN 380.0131
LYS 390.0112
SER 400.0210
GLY 410.0287
SER 420.0139
SER 430.0074
PRO 440.0121
LYS 450.0106
PRO 460.0130
TRP 470.0119
ILE 480.0095
HIS 490.0080
ALA 500.0066
THR 510.0071
SER 520.0076
ASN 530.0100
LEU 540.0117
ALA 550.0141
SER 560.0286
GLY 570.0240
VAL 580.0146
PRO 590.0135
ALA 600.0169
ARG 610.0104
PHE 620.0108
SER 630.0119
GLY 640.0130
SER 650.0085
GLY 660.0058
SER 670.0035
GLY 680.0044
THR 690.0053
SER 700.0070
TYR 710.0084
SER 720.0110
LEU 730.0132
THR 740.0137
ILE 750.0087
SER 760.0063
ARG 770.0052
VAL 780.0068
GLU 790.0097
ALA 800.0101
GLU 810.0093
ASP 820.0067
ALA 830.0095
ALA 840.0063
THR 850.0109
TYR 860.0124
TYR 870.0139
CYS 880.0140
GLN 890.0076
GLN 900.0044
TRP 910.0046
SER 920.0069
SER 930.0077
HIS 940.0110
PRO 950.0078
PRO 960.0087
THR 970.0084
PHE 980.0142
GLY 990.0141
SER 1000.0151
GLY 1010.0161
THR 1020.0140
LYS 1030.0081
LEU 1040.0058
GLU 1050.0081
ILE 1060.0101
LYS 1070.0075
ARG 1080.0063
ALA 1090.0137
ASP 1100.0298
ALA 1110.0219
ALA 1120.0212
PRO 1130.0114
THR 1140.0130
VAL 1150.0139
SER 1160.0150
ILE 1170.0136
PHE 1180.0127
PRO 1190.0054
PRO 1200.0060
SER 1210.0052
SER 1220.0030
GLU 1230.0030
GLN 1240.0046
LEU 1250.0069
THR 1260.0070
SER 1270.0084
GLY 1280.0101
GLY 1290.0091
ALA 1300.0065
SER 1310.0064
VAL 1320.0077
VAL 1330.0105
CYS 1340.0129
PHE 1350.0111
LEU 1360.0087
ASN 1370.0079
ASN 1380.0077
PHE 1390.0125
TYR 1400.0198
PRO 1410.0267
LYS 1420.0271
ASP 1430.0312
ILE 1440.0144
ASN 1450.0124
VAL 1460.0142
LYS 1470.0129
TRP 1480.0119
LYS 1490.0135
ILE 1500.0071
ASP 1510.0096
GLY 1520.0320
SER 1530.0354
GLU 1540.0301
ARG 1550.0134
GLN 1560.0083
ASN 1570.0063
GLY 1580.0027
VAL 1590.0005
LEU 1600.0052
ASN 1610.0079
SER 1620.0128
TRP 1630.0132
THR 1640.0187
ASP 1650.0229
GLN 1660.0190
ASP 1670.0270
SER 1680.0272
LYS 1690.0351
ASP 1700.0152
SER 1710.0075
THR 1720.0081
TYR 1730.0131
SER 1740.0084
MET 1750.0068
SER 1760.0081
SER 1770.0071
THR 1780.0090
LEU 1790.0069
THR 1800.0061
LEU 1810.0043
THR 1820.0075
LYS 1830.0076
ASP 1840.0063
GLU 1850.0040
TYR 1860.0058
GLU 1870.0062
ARG 1880.0058
HIS 1890.0022
ASN 1900.0013
SER 1910.0090
TYR 1920.0135
THR 1930.0199
CYS 1940.0223
GLU 1950.0211
ALA 1960.0195
THR 1970.0175
HIS 1980.0161
LYS 1990.0242
THR 2000.0334
SER 2010.0469
THR 2020.0864
SER 2030.0452
PRO 2040.0325
ILE 2050.0137
VAL 2060.0177
LYS 2070.0191
SER 2080.0208
PHE 2090.0107
ASN 2100.0047
ARG 2110.0054
ASN 2120.0152
GLU 2130.0170
CYS 2140.0194
GLU 10.0398
VAL 20.0193
GLN 30.0228
LEU 40.0074
VAL 50.0059
GLU 60.0094
SER 70.0107
GLY 80.0122
GLY 90.0088
GLY 100.0080
LEU 110.0076
VAL 120.0048
LYS 130.0078
PRO 140.0134
GLY 150.0154
GLY 160.0122
SER 170.0142
LEU 180.0143
LYS 190.0125
LEU 200.0104
SER 210.0101
CYS 220.0031
ALA 230.0063
ALA 240.0082
SER 250.0075
GLY 260.0113
PHE 270.0071
ILE 280.0057
PHE 290.0068
SER 300.0057
ASP 310.0074
TYR 320.0070
TYR 330.0071
MET 340.0018
TYR 350.0035
TRP 360.0067
VAL 370.0113
ARG 380.0103
GLN 390.0102
THR 400.0111
PRO 410.0110
GLU 420.0136
LYS 430.0142
ARG 440.0154
LEU 450.0154
GLU 460.0091
TRP 470.0103
VAL 480.0108
ALA 490.0094
THR 500.0055
ILE 510.0028
SER 520.0050
ASP 520.0138
GLY 530.0218
ASN 540.0222
SER 550.0130
TYR 560.0116
THR 570.0076
TYR 580.0084
TYR 590.0104
VAL 600.0107
ASP 610.0111
SER 620.0116
VAL 630.0123
LYS 640.0129
GLY 650.0169
ARG 660.0163
PHE 670.0123
THR 680.0114
ILE 690.0097
SER 700.0038
ARG 710.0056
ASP 720.0127
ASN 730.0186
ALA 740.0256
LYS 750.0243
ASN 760.0122
ASN 770.0084
LEU 780.0033
TYR 790.0087
LEU 800.0107
GLN 810.0117
MET 820.0160
SER 820.0179
SER 820.0164
LEU 820.0096
LYS 830.0111
SER 840.0102
GLU 850.0073
ASP 860.0012
THR 870.0063
ALA 880.0073
ILE 890.0093
TYR 900.0097
TYR 910.0082
CYS 920.0079
ALA 930.0067
ARG 940.0068
ASP 950.0064
GLY 960.0072
PRO 970.0151
THR 980.0193
ASP 990.0192
SER 1000.0101
SER 1000.0094
GLY 1000.0099
TYR 1000.0068
GLY 1000.0029
GLY 1000.0012
PHE 1000.0036
GLY 1010.0039
TYR 1020.0068
TRP 1030.0070
GLY 1040.0067
GLN 1050.0062
GLY 1060.0100
THR 1070.0095
LEU 1080.0084
VAL 1090.0065
THR 1100.0065
VAL 1110.0058
SER 1120.0142
GLU 1130.0205
ALA 1140.0163
LYS 1150.0180
THR 1160.0155
THR 1170.0173
PRO 1180.0151
PRO 1190.0148
SER 1200.0187
VAL 1210.0086
TYR 1220.0051
PRO 1230.0042
LEU 1240.0040
ALA 1250.0038
PRO 1260.0042
GLY 1270.0115
SER 1280.0157
ALA 1290.0424
ALA 1300.0308
GLN 1330.0384
THR 1340.0289
ASN 1350.0160
SER 1360.0153
MET 1370.0103
VAL 1380.0105
THR 1390.0055
LEU 1400.0059
GLY 1410.0071
CYS 1420.0057
LEU 1430.0076
VAL 1440.0105
LYS 1450.0146
GLY 1460.0125
TYR 1470.0106
PHE 1480.0070
PRO 1490.0039
GLU 1500.0044
PRO 1510.0027
VAL 1520.0070
THR 1530.0080
VAL 1540.0091
THR 1560.0099
TRP 1570.0061
ASN 1620.0073
SER 1630.0100
GLY 1640.0204
SER 1650.0278
LEU 1660.0197
SER 1670.0247
SER 1680.0207
GLY 1690.0053
VAL 1710.0096
HIS 1720.0115
THR 1730.0140
PHE 1740.0156
PRO 1750.0166
ALA 1760.0152
VAL 1770.0156
LEU 1780.0094
GLN 1790.0061
SER 1800.0344
ASP 1830.0110
LEU 1840.0075
TYR 1850.0097
THR 1860.0135
LEU 1870.0133
SER 1880.0135
SER 1890.0122
SER 1900.0094
VAL 1910.0056
THR 1920.0038
VAL 1930.0040
PRO 1940.0045
SER 1950.0087
SER 1960.0147
PRO 1980.0176
ARG 1990.0124
PRO 2000.0172
SER 2020.0345
GLU 2030.0249
THR 2040.0129
VAL 2050.0075
THR 2060.0056
CYS 2080.0068
ASN 2090.0073
VAL 2100.0098
ALA 2110.0116
HIS 2120.0118
PRO 2130.0127
ALA 2140.0144
SER 2150.0208
SER 2160.0223
THR 2170.0174
LYS 2180.0141
VAL 2190.0152
ASP 2200.0074
LYS 2210.0067
LYS 2220.0070
ILE 2230.0076
VAL 2260.0136
PRO 2270.0114
ARG 2280.0111
ASP 2320.0330
CYS 2330.0341

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.