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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0602
ILE 4790.0040
PHE 4800.0067
ILE 4810.0092
SER 4820.0100
ASP 4830.0121
ASP 4840.0101
LYS 4850.0080
ASP 4860.0049
SER 4870.0054
LEU 4880.0027
LYS 4890.0032
CYS 4900.0041
PRO 4910.0047
CYS 4920.0049
ASP 4930.0040
PRO 4940.0085
GLU 4950.0110
MET 4960.0124
VAL 4970.0131
SER 4980.0094
GLN 4990.0068
SER 5000.0185
THR 5010.0241
CYS 5020.0186
ARG 5030.0154
PHE 5040.0137
PHE 5050.0154
VAL 5060.0087
CYS 5070.0069
LYS 5080.0096
CYS 5090.0067
VAL 5100.0076
GLU 5110.0112
ARG 5120.0459
SER 20.0055
VAL 30.0044
LEU 40.0046
SER 50.0064
GLN 60.0071
SER 70.0110
PRO 80.0118
ALA 90.0104
ILE 100.0083
LEU 110.0057
SER 120.0023
ALA 130.0030
SER 140.0052
PRO 150.0076
GLY 160.0082
GLU 170.0042
LYS 180.0055
VAL 190.0053
THR 200.0092
MET 210.0085
THR 220.0090
CYS 230.0072
ARG 240.0072
ALA 250.0049
ARG 260.0157
SER 270.0116
SER 290.0116
VAL 300.0092
SER 310.0088
TYR 320.0057
MET 330.0052
HIS 340.0050
TRP 350.0024
TYR 360.0029
GLN 370.0031
GLN 380.0081
LYS 390.0123
SER 400.0198
GLY 410.0361
SER 420.0220
SER 430.0070
PRO 440.0035
LYS 450.0031
PRO 460.0047
TRP 470.0045
ILE 480.0033
HIS 490.0045
ALA 500.0053
THR 510.0030
SER 520.0038
ASN 530.0054
LEU 540.0057
ALA 550.0067
SER 560.0171
GLY 570.0168
VAL 580.0078
PRO 590.0083
ALA 600.0086
ARG 610.0072
PHE 620.0033
SER 630.0042
GLY 640.0040
SER 650.0071
GLY 660.0090
SER 670.0110
GLY 680.0126
THR 690.0102
SER 700.0109
TYR 710.0051
SER 720.0066
LEU 730.0065
THR 740.0070
ILE 750.0050
SER 760.0069
ARG 770.0072
VAL 780.0057
GLU 790.0076
ALA 800.0078
GLU 810.0094
ASP 820.0069
ALA 830.0067
ALA 840.0051
THR 850.0052
TYR 860.0029
TYR 870.0024
CYS 880.0023
GLN 890.0063
GLN 900.0069
TRP 910.0068
SER 920.0092
SER 930.0105
HIS 940.0111
PRO 950.0069
PRO 960.0067
THR 970.0075
PHE 980.0044
GLY 990.0034
SER 1000.0044
GLY 1010.0054
THR 1020.0052
LYS 1030.0044
LEU 1040.0035
GLU 1050.0027
ILE 1060.0044
LYS 1070.0054
ARG 1080.0055
ALA 1090.0067
ASP 1100.0035
ALA 1110.0023
ALA 1120.0050
PRO 1130.0062
THR 1140.0081
VAL 1150.0091
SER 1160.0103
ILE 1170.0098
PHE 1180.0100
PRO 1190.0185
PRO 1200.0182
SER 1210.0185
SER 1220.0389
GLU 1230.0319
GLN 1240.0246
LEU 1250.0367
THR 1260.0592
SER 1270.0574
GLY 1280.0321
GLY 1290.0192
ALA 1300.0086
SER 1310.0041
VAL 1320.0045
VAL 1330.0043
CYS 1340.0077
PHE 1350.0080
LEU 1360.0076
ASN 1370.0075
ASN 1380.0075
PHE 1390.0071
TYR 1400.0033
PRO 1410.0045
LYS 1420.0052
ASP 1430.0016
ILE 1440.0074
ASN 1450.0157
VAL 1460.0137
LYS 1470.0138
TRP 1480.0141
LYS 1490.0159
ILE 1500.0152
ASP 1510.0142
GLY 1520.0150
SER 1530.0143
GLU 1540.0205
ARG 1550.0163
GLN 1560.0154
ASN 1570.0134
GLY 1580.0178
VAL 1590.0163
LEU 1600.0155
ASN 1610.0142
SER 1620.0141
TRP 1630.0118
THR 1640.0102
ASP 1650.0123
GLN 1660.0101
ASP 1670.0157
SER 1680.0202
LYS 1690.0316
ASP 1700.0172
SER 1710.0104
THR 1720.0086
TYR 1730.0074
SER 1740.0083
MET 1750.0094
SER 1760.0097
SER 1770.0095
THR 1780.0109
LEU 1790.0101
THR 1800.0071
LEU 1810.0060
THR 1820.0107
LYS 1830.0182
ASP 1840.0268
GLU 1850.0173
TYR 1860.0131
GLU 1870.0171
ARG 1880.0140
HIS 1890.0059
ASN 1900.0159
SER 1910.0152
TYR 1920.0143
THR 1930.0163
CYS 1940.0185
GLU 1950.0189
ALA 1960.0189
THR 1970.0220
HIS 1980.0151
LYS 1990.0160
THR 2000.0206
SER 2010.0295
THR 2020.0433
SER 2030.0369
PRO 2040.0320
ILE 2050.0236
VAL 2060.0148
LYS 2070.0157
SER 2080.0194
PHE 2090.0240
ASN 2100.0223
ARG 2110.0153
ASN 2120.0381
GLU 2130.0279
CYS 2140.0191
GLU 10.0100
VAL 20.0048
GLN 30.0015
LEU 40.0017
VAL 50.0028
GLU 60.0038
SER 70.0045
GLY 80.0063
GLY 90.0083
GLY 100.0194
LEU 110.0127
VAL 120.0192
LYS 130.0369
PRO 140.0256
GLY 150.0260
GLY 160.0186
SER 170.0166
LEU 180.0157
LYS 190.0078
LEU 200.0060
SER 210.0047
CYS 220.0052
ALA 230.0051
ALA 240.0035
SER 250.0071
GLY 260.0075
PHE 270.0081
ILE 280.0088
PHE 290.0074
SER 300.0078
ASP 310.0051
TYR 320.0042
TYR 330.0033
MET 340.0031
TYR 350.0037
TRP 360.0041
VAL 370.0044
ARG 380.0040
GLN 390.0044
THR 400.0069
PRO 410.0163
GLU 420.0228
LYS 430.0142
ARG 440.0114
LEU 450.0049
GLU 460.0038
TRP 470.0043
VAL 480.0043
ALA 490.0067
THR 500.0053
ILE 510.0041
SER 520.0058
ASP 520.0049
GLY 530.0092
ASN 540.0115
SER 550.0073
TYR 560.0100
THR 570.0096
TYR 580.0086
TYR 590.0097
VAL 600.0112
ASP 610.0161
SER 620.0165
VAL 630.0131
LYS 640.0136
GLY 650.0123
ARG 660.0125
PHE 670.0117
THR 680.0096
ILE 690.0074
SER 700.0039
ARG 710.0037
ASP 720.0074
ASN 730.0120
ALA 740.0188
LYS 750.0165
ASN 760.0081
ASN 770.0058
LEU 780.0032
TYR 790.0042
LEU 800.0075
GLN 810.0103
MET 820.0152
SER 820.0156
SER 820.0134
LEU 820.0110
LYS 830.0079
SER 840.0068
GLU 850.0052
ASP 860.0068
THR 870.0052
ALA 880.0050
ILE 890.0047
TYR 900.0045
TYR 910.0024
CYS 920.0029
ALA 930.0032
ARG 940.0050
ASP 950.0048
GLY 960.0053
PRO 970.0086
THR 980.0079
ASP 990.0099
SER 1000.0065
SER 1000.0059
GLY 1000.0056
TYR 1000.0060
GLY 1000.0058
GLY 1000.0062
PHE 1000.0061
GLY 1010.0062
TYR 1020.0061
TRP 1030.0027
GLY 1040.0022
GLN 1050.0029
GLY 1060.0058
THR 1070.0068
LEU 1080.0091
VAL 1090.0096
THR 1100.0057
VAL 1110.0083
SER 1120.0199
GLU 1130.0354
ALA 1140.0125
LYS 1150.0233
THR 1160.0189
THR 1170.0229
PRO 1180.0155
PRO 1190.0065
SER 1200.0093
VAL 1210.0223
TYR 1220.0242
PRO 1230.0294
LEU 1240.0194
ALA 1250.0219
PRO 1260.0237
GLY 1270.0255
SER 1280.0240
ALA 1290.0318
ALA 1300.0373
GLN 1330.0602
THR 1340.0450
ASN 1350.0467
SER 1360.0395
MET 1370.0315
VAL 1380.0298
THR 1390.0178
LEU 1400.0190
GLY 1410.0223
CYS 1420.0193
LEU 1430.0170
VAL 1440.0122
LYS 1450.0099
GLY 1460.0114
TYR 1470.0136
PHE 1480.0152
PRO 1490.0129
GLU 1500.0144
PRO 1510.0149
VAL 1520.0113
THR 1530.0078
VAL 1540.0152
THR 1560.0246
TRP 1570.0208
ASN 1620.0326
SER 1630.0393
GLY 1640.0368
SER 1650.0387
LEU 1660.0208
SER 1670.0106
SER 1680.0191
GLY 1690.0158
VAL 1710.0068
HIS 1720.0099
THR 1730.0121
PHE 1740.0147
PRO 1750.0177
ALA 1760.0209
VAL 1770.0257
LEU 1780.0222
GLN 1790.0200
SER 1800.0257
ASP 1830.0138
LEU 1840.0157
TYR 1850.0189
THR 1860.0161
LEU 1870.0138
SER 1880.0129
SER 1890.0142
SER 1900.0143
VAL 1910.0117
THR 1920.0196
VAL 1930.0161
PRO 1940.0188
SER 1950.0248
SER 1960.0246
PRO 1980.0039
ARG 1990.0038
PRO 2000.0126
SER 2020.0255
GLU 2030.0315
THR 2040.0318
VAL 2050.0261
THR 2060.0329
CYS 2080.0293
ASN 2090.0263
VAL 2100.0235
ALA 2110.0070
HIS 2120.0127
PRO 2130.0178
ALA 2140.0224
SER 2150.0263
SER 2160.0245
THR 2170.0096
LYS 2180.0089
VAL 2190.0247
ASP 2200.0338
LYS 2210.0322
LYS 2220.0305
ILE 2230.0265
VAL 2260.0191
PRO 2270.0177
ARG 2280.0195
ASP 2320.0248
CYS 2330.0478

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.