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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 51  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0793
ILE 4790.0161
PHE 4800.0083
ILE 4810.0078
SER 4820.0110
ASP 4830.0158
ASP 4840.0229
LYS 4850.0158
ASP 4860.0166
SER 4870.0154
LEU 4880.0095
LYS 4890.0092
CYS 4900.0070
PRO 4910.0030
CYS 4920.0032
ASP 4930.0041
PRO 4940.0133
GLU 4950.0161
MET 4960.0167
VAL 4970.0148
SER 4980.0083
GLN 4990.0108
SER 5000.0315
THR 5010.0270
CYS 5020.0183
ARG 5030.0138
PHE 5040.0129
PHE 5050.0172
VAL 5060.0116
CYS 5070.0099
LYS 5080.0111
CYS 5090.0062
VAL 5100.0074
GLU 5110.0078
ARG 5120.0388
SER 20.0123
VAL 30.0161
LEU 40.0074
SER 50.0033
GLN 60.0061
SER 70.0089
PRO 80.0114
ALA 90.0122
ILE 100.0107
LEU 110.0133
SER 120.0142
ALA 130.0141
SER 140.0232
PRO 150.0190
GLY 160.0163
GLU 170.0108
LYS 180.0098
VAL 190.0161
THR 200.0123
MET 210.0095
THR 220.0079
CYS 230.0053
ARG 240.0062
ALA 250.0103
ARG 260.0281
SER 270.0219
SER 290.0185
VAL 300.0127
SER 310.0147
TYR 320.0102
MET 330.0083
HIS 340.0089
TRP 350.0068
TYR 360.0046
GLN 370.0022
GLN 380.0060
LYS 390.0116
SER 400.0179
GLY 410.0215
SER 420.0112
SER 430.0068
PRO 440.0063
LYS 450.0034
PRO 460.0032
TRP 470.0009
ILE 480.0056
HIS 490.0071
ALA 500.0095
THR 510.0104
SER 520.0084
ASN 530.0120
LEU 540.0107
ALA 550.0053
SER 560.0203
GLY 570.0251
VAL 580.0168
PRO 590.0200
ALA 600.0247
ARG 610.0175
PHE 620.0117
SER 630.0134
GLY 640.0127
SER 650.0079
GLY 660.0084
SER 670.0148
GLY 680.0177
THR 690.0142
SER 700.0106
TYR 710.0084
SER 720.0085
LEU 730.0089
THR 740.0139
ILE 750.0099
SER 760.0130
ARG 770.0017
VAL 780.0056
GLU 790.0121
ALA 800.0143
GLU 810.0124
ASP 820.0087
ALA 830.0083
ALA 840.0066
THR 850.0067
TYR 860.0046
TYR 870.0072
CYS 880.0089
GLN 890.0081
GLN 900.0054
TRP 910.0039
SER 920.0068
SER 930.0045
HIS 940.0039
PRO 950.0038
PRO 960.0057
THR 970.0076
PHE 980.0102
GLY 990.0100
SER 1000.0090
GLY 1010.0087
THR 1020.0071
LYS 1030.0063
LEU 1040.0085
GLU 1050.0095
ILE 1060.0117
LYS 1070.0155
ARG 1080.0167
ALA 1090.0194
ASP 1100.0163
ALA 1110.0184
ALA 1120.0224
PRO 1130.0188
THR 1140.0151
VAL 1150.0141
SER 1160.0068
ILE 1170.0060
PHE 1180.0107
PRO 1190.0131
PRO 1200.0127
SER 1210.0117
SER 1220.0054
GLU 1230.0132
GLN 1240.0183
LEU 1250.0175
THR 1260.0255
SER 1270.0341
GLY 1280.0303
GLY 1290.0274
ALA 1300.0197
SER 1310.0114
VAL 1320.0118
VAL 1330.0114
CYS 1340.0057
PHE 1350.0082
LEU 1360.0133
ASN 1370.0150
ASN 1380.0129
PHE 1390.0143
TYR 1400.0108
PRO 1410.0068
LYS 1420.0105
ASP 1430.0141
ILE 1440.0183
ASN 1450.0234
VAL 1460.0175
LYS 1470.0105
TRP 1480.0051
LYS 1490.0111
ILE 1500.0110
ASP 1510.0108
GLY 1520.0227
SER 1530.0208
GLU 1540.0184
ARG 1550.0077
GLN 1560.0077
ASN 1570.0076
GLY 1580.0068
VAL 1590.0081
LEU 1600.0100
ASN 1610.0143
SER 1620.0155
TRP 1630.0183
THR 1640.0124
ASP 1650.0079
GLN 1660.0029
ASP 1670.0049
SER 1680.0062
LYS 1690.0146
ASP 1700.0122
SER 1710.0062
THR 1720.0045
TYR 1730.0079
SER 1740.0118
MET 1750.0154
SER 1760.0139
SER 1770.0103
THR 1780.0076
LEU 1790.0152
THR 1800.0167
LEU 1810.0166
THR 1820.0276
LYS 1830.0251
ASP 1840.0240
GLU 1850.0223
TYR 1860.0178
GLU 1870.0124
ARG 1880.0181
HIS 1890.0135
ASN 1900.0065
SER 1910.0100
TYR 1920.0116
THR 1930.0121
CYS 1940.0112
GLU 1950.0153
ALA 1960.0219
THR 1970.0240
HIS 1980.0195
LYS 1990.0176
THR 2000.0244
SER 2010.0417
THR 2020.0528
SER 2030.0338
PRO 2040.0284
ILE 2050.0305
VAL 2060.0137
LYS 2070.0105
SER 2080.0122
PHE 2090.0157
ASN 2100.0108
ARG 2110.0111
ASN 2120.0336
GLU 2130.0338
CYS 2140.0431
GLU 10.0412
VAL 20.0194
GLN 30.0211
LEU 40.0090
VAL 50.0078
GLU 60.0063
SER 70.0044
GLY 80.0058
GLY 90.0062
GLY 100.0097
LEU 110.0087
VAL 120.0082
LYS 130.0113
PRO 140.0062
GLY 150.0078
GLY 160.0065
SER 170.0069
LEU 180.0083
LYS 190.0066
LEU 200.0060
SER 210.0071
CYS 220.0075
ALA 230.0069
ALA 240.0082
SER 250.0053
GLY 260.0054
PHE 270.0055
ILE 280.0124
PHE 290.0110
SER 300.0094
ASP 310.0061
TYR 320.0042
TYR 330.0029
MET 340.0044
TYR 350.0045
TRP 360.0051
VAL 370.0064
ARG 380.0057
GLN 390.0052
THR 400.0109
PRO 410.0166
GLU 420.0266
LYS 430.0173
ARG 440.0187
LEU 450.0141
GLU 460.0060
TRP 470.0061
VAL 480.0063
ALA 490.0031
THR 500.0041
ILE 510.0046
SER 520.0042
ASP 520.0052
GLY 530.0058
ASN 540.0051
SER 550.0059
TYR 560.0048
THR 570.0044
TYR 580.0029
TYR 590.0037
VAL 600.0056
ASP 610.0127
SER 620.0137
VAL 630.0090
LYS 640.0089
GLY 650.0086
ARG 660.0077
PHE 670.0059
THR 680.0053
ILE 690.0055
SER 700.0056
ARG 710.0080
ASP 720.0106
ASN 730.0120
ALA 740.0168
LYS 750.0168
ASN 760.0111
ASN 770.0096
LEU 780.0081
TYR 790.0078
LEU 800.0062
GLN 810.0063
MET 820.0070
SER 820.0069
SER 820.0078
LEU 820.0075
LYS 830.0097
SER 840.0109
GLU 850.0101
ASP 860.0087
THR 870.0095
ALA 880.0050
ILE 890.0048
TYR 900.0051
TYR 910.0064
CYS 920.0064
ALA 930.0061
ARG 940.0077
ASP 950.0071
GLY 960.0090
PRO 970.0135
THR 980.0170
ASP 990.0142
SER 1000.0093
SER 1000.0107
GLY 1000.0124
TYR 1000.0097
GLY 1000.0075
GLY 1000.0053
PHE 1000.0063
GLY 1010.0074
TYR 1020.0101
TRP 1030.0077
GLY 1040.0080
GLN 1050.0082
GLY 1060.0052
THR 1070.0055
LEU 1080.0062
VAL 1090.0078
THR 1100.0075
VAL 1110.0060
SER 1120.0048
GLU 1130.0089
ALA 1140.0104
LYS 1150.0140
THR 1160.0152
THR 1170.0176
PRO 1180.0197
PRO 1190.0202
SER 1200.0252
VAL 1210.0191
TYR 1220.0142
PRO 1230.0116
LEU 1240.0111
ALA 1250.0157
PRO 1260.0208
GLY 1270.0263
SER 1280.0393
ALA 1290.0612
ALA 1300.0298
GLN 1330.0053
THR 1340.0286
ASN 1350.0524
SER 1360.0246
MET 1370.0232
VAL 1380.0265
THR 1390.0105
LEU 1400.0095
GLY 1410.0075
CYS 1420.0093
LEU 1430.0141
VAL 1440.0169
LYS 1450.0234
GLY 1460.0213
TYR 1470.0184
PHE 1480.0145
PRO 1490.0124
GLU 1500.0131
PRO 1510.0125
VAL 1520.0092
THR 1530.0086
VAL 1540.0042
THR 1560.0050
TRP 1570.0058
ASN 1620.0096
SER 1630.0090
GLY 1640.0145
SER 1650.0193
LEU 1660.0160
SER 1670.0186
SER 1680.0228
GLY 1690.0184
VAL 1710.0091
HIS 1720.0099
THR 1730.0115
PHE 1740.0145
PRO 1750.0166
ALA 1760.0196
VAL 1770.0201
LEU 1780.0102
GLN 1790.0089
SER 1800.0793
ASP 1830.0104
LEU 1840.0122
TYR 1850.0166
THR 1860.0172
LEU 1870.0152
SER 1880.0136
SER 1890.0081
SER 1900.0066
VAL 1910.0064
THR 1920.0168
VAL 1930.0172
PRO 1940.0180
SER 1950.0158
SER 1960.0198
PRO 1980.0223
ARG 1990.0210
PRO 2000.0279
SER 2020.0423
GLU 2030.0324
THR 2040.0211
VAL 2050.0075
THR 2060.0063
CYS 2080.0071
ASN 2090.0076
VAL 2100.0071
ALA 2110.0149
HIS 2120.0129
PRO 2130.0174
ALA 2140.0164
SER 2150.0215
SER 2160.0277
THR 2170.0240
LYS 2180.0239
VAL 2190.0234
ASP 2200.0106
LYS 2210.0105
LYS 2220.0119
ILE 2230.0161
VAL 2260.0296
PRO 2270.0337
ARG 2280.0305
ASP 2320.0552
CYS 2330.0581

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.