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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1010
ILE 4790.0333
PHE 4800.0227
ILE 4810.0145
SER 4820.0045
ASP 4830.0124
ASP 4840.0267
LYS 4850.0212
ASP 4860.0248
SER 4870.0237
LEU 4880.0120
LYS 4890.0098
CYS 4900.0024
PRO 4910.0049
CYS 4920.0062
ASP 4930.0066
PRO 4940.0126
GLU 4950.0170
MET 4960.0206
VAL 4970.0243
SER 4980.0063
GLN 4990.0139
SER 5000.0475
THR 5010.0229
CYS 5020.0111
ARG 5030.0155
PHE 5040.0171
PHE 5050.0224
VAL 5060.0154
CYS 5070.0091
LYS 5080.0093
CYS 5090.0059
VAL 5100.0048
GLU 5110.0055
ARG 5120.0368
SER 20.0065
VAL 30.0067
LEU 40.0066
SER 50.0027
GLN 60.0008
SER 70.0044
PRO 80.0047
ALA 90.0046
ILE 100.0040
LEU 110.0050
SER 120.0066
ALA 130.0073
SER 140.0143
PRO 150.0148
GLY 160.0192
GLU 170.0147
LYS 180.0084
VAL 190.0123
THR 200.0091
MET 210.0061
THR 220.0061
CYS 230.0036
ARG 240.0041
ALA 250.0069
ARG 260.0198
SER 270.0079
SER 290.0046
VAL 300.0048
SER 310.0051
TYR 320.0027
MET 330.0028
HIS 340.0030
TRP 350.0011
TYR 360.0007
GLN 370.0020
GLN 380.0086
LYS 390.0166
SER 400.0258
GLY 410.0513
SER 420.0321
SER 430.0123
PRO 440.0059
LYS 450.0041
PRO 460.0037
TRP 470.0038
ILE 480.0049
HIS 490.0062
ALA 500.0080
THR 510.0075
SER 520.0113
ASN 530.0172
LEU 540.0183
ALA 550.0169
SER 560.0382
GLY 570.0344
VAL 580.0182
PRO 590.0144
ALA 600.0161
ARG 610.0103
PHE 620.0101
SER 630.0126
GLY 640.0118
SER 650.0109
GLY 660.0074
SER 670.0062
GLY 680.0071
THR 690.0059
SER 700.0052
TYR 710.0048
SER 720.0059
LEU 730.0069
THR 740.0109
ILE 750.0060
SER 760.0052
ARG 770.0085
VAL 780.0061
GLU 790.0102
ALA 800.0069
GLU 810.0066
ASP 820.0049
ALA 830.0044
ALA 840.0040
THR 850.0032
TYR 860.0034
TYR 870.0028
CYS 880.0021
GLN 890.0044
GLN 900.0056
TRP 910.0069
SER 920.0068
SER 930.0072
HIS 940.0098
PRO 950.0100
PRO 960.0082
THR 970.0063
PHE 980.0069
GLY 990.0068
SER 1000.0078
GLY 1010.0033
THR 1020.0024
LYS 1030.0014
LEU 1040.0024
GLU 1050.0034
ILE 1060.0047
LYS 1070.0070
ARG 1080.0071
ALA 1090.0114
ASP 1100.0115
ALA 1110.0112
ALA 1120.0103
PRO 1130.0057
THR 1140.0060
VAL 1150.0056
SER 1160.0031
ILE 1170.0022
PHE 1180.0040
PRO 1190.0055
PRO 1200.0046
SER 1210.0059
SER 1220.0161
GLU 1230.0086
GLN 1240.0054
LEU 1250.0158
THR 1260.0315
SER 1270.0343
GLY 1280.0212
GLY 1290.0140
ALA 1300.0039
SER 1310.0040
VAL 1320.0041
VAL 1330.0035
CYS 1340.0022
PHE 1350.0020
LEU 1360.0024
ASN 1370.0044
ASN 1380.0052
PHE 1390.0044
TYR 1400.0070
PRO 1410.0062
LYS 1420.0041
ASP 1430.0045
ILE 1440.0041
ASN 1450.0040
VAL 1460.0032
LYS 1470.0024
TRP 1480.0026
LYS 1490.0019
ILE 1500.0027
ASP 1510.0026
GLY 1520.0036
SER 1530.0029
GLU 1540.0043
ARG 1550.0021
GLN 1560.0020
ASN 1570.0013
GLY 1580.0023
VAL 1590.0026
LEU 1600.0046
ASN 1610.0027
SER 1620.0018
TRP 1630.0015
THR 1640.0049
ASP 1650.0049
GLN 1660.0053
ASP 1670.0127
SER 1680.0129
LYS 1690.0244
ASP 1700.0151
SER 1710.0082
THR 1720.0066
TYR 1730.0030
SER 1740.0028
MET 1750.0028
SER 1760.0018
SER 1770.0023
THR 1780.0025
LEU 1790.0037
THR 1800.0039
LEU 1810.0055
THR 1820.0063
LYS 1830.0053
ASP 1840.0078
GLU 1850.0083
TYR 1860.0078
GLU 1870.0095
ARG 1880.0102
HIS 1890.0060
ASN 1900.0036
SER 1910.0019
TYR 1920.0017
THR 1930.0008
CYS 1940.0044
GLU 1950.0042
ALA 1960.0048
THR 1970.0068
HIS 1980.0079
LYS 1990.0093
THR 2000.0096
SER 2010.0096
THR 2020.0203
SER 2030.0111
PRO 2040.0087
ILE 2050.0059
VAL 2060.0045
LYS 2070.0051
SER 2080.0041
PHE 2090.0023
ASN 2100.0028
ARG 2110.0047
ASN 2120.0161
GLU 2130.0144
CYS 2140.0161
GLU 10.0348
VAL 20.0208
GLN 30.0227
LEU 40.0068
VAL 50.0079
GLU 60.0133
SER 70.0178
GLY 80.0221
GLY 90.0249
GLY 100.0385
LEU 110.0335
VAL 120.0330
LYS 130.0425
PRO 140.0402
GLY 150.0513
GLY 160.0350
SER 170.0311
LEU 180.0290
LYS 190.0130
LEU 200.0127
SER 210.0139
CYS 220.0112
ALA 230.0122
ALA 240.0126
SER 250.0220
GLY 260.0241
PHE 270.0197
ILE 280.0201
PHE 290.0162
SER 300.0118
ASP 310.0127
TYR 320.0090
TYR 330.0069
MET 340.0085
TYR 350.0087
TRP 360.0097
VAL 370.0112
ARG 380.0100
GLN 390.0093
THR 400.0157
PRO 410.0257
GLU 420.0418
LYS 430.0258
ARG 440.0253
LEU 450.0157
GLU 460.0100
TRP 470.0108
VAL 480.0122
ALA 490.0098
THR 500.0100
ILE 510.0096
SER 520.0079
ASP 520.0102
GLY 530.0117
ASN 540.0094
SER 550.0070
TYR 560.0056
THR 570.0073
TYR 580.0048
TYR 590.0068
VAL 600.0127
ASP 610.0276
SER 620.0251
VAL 630.0140
LYS 640.0187
GLY 650.0206
ARG 660.0179
PHE 670.0020
THR 680.0041
ILE 690.0069
SER 700.0165
ARG 710.0135
ASP 720.0199
ASN 730.0210
ALA 740.0377
LYS 750.0362
ASN 760.0177
ASN 770.0125
LEU 780.0086
TYR 790.0068
LEU 800.0058
GLN 810.0054
MET 820.0185
SER 820.0260
SER 820.0277
LEU 820.0175
LYS 830.0175
SER 840.0139
GLU 850.0125
ASP 860.0102
THR 870.0145
ALA 880.0156
ILE 890.0151
TYR 900.0138
TYR 910.0098
CYS 920.0085
ALA 930.0062
ARG 940.0072
ASP 950.0042
GLY 960.0052
PRO 970.0130
THR 980.0154
ASP 990.0142
SER 1000.0059
SER 1000.0048
GLY 1000.0046
TYR 1000.0027
GLY 1000.0048
GLY 1000.0025
PHE 1000.0039
GLY 1010.0052
TYR 1020.0074
TRP 1030.0057
GLY 1040.0057
GLN 1050.0102
GLY 1060.0194
THR 1070.0206
LEU 1080.0241
VAL 1090.0263
THR 1100.0230
VAL 1110.0200
SER 1120.0307
GLU 1130.0325
ALA 1140.0331
LYS 1150.0387
THR 1160.0269
THR 1170.0218
PRO 1180.0159
PRO 1190.0093
SER 1200.0115
VAL 1210.0087
TYR 1220.0075
PRO 1230.0103
LEU 1240.0063
ALA 1250.0077
PRO 1260.0098
GLY 1270.0210
SER 1280.0155
ALA 1290.0323
ALA 1300.0353
GLN 1330.0470
THR 1340.0393
ASN 1350.0300
SER 1360.0169
MET 1370.0119
VAL 1380.0191
THR 1390.0058
LEU 1400.0052
GLY 1410.0065
CYS 1420.0043
LEU 1430.0064
VAL 1440.0068
LYS 1450.0089
GLY 1460.0139
TYR 1470.0154
PHE 1480.0221
PRO 1490.0238
GLU 1500.0218
PRO 1510.0186
VAL 1520.0175
THR 1530.0276
VAL 1540.0102
THR 1560.0061
TRP 1570.0073
ASN 1620.0114
SER 1630.0215
GLY 1640.0247
SER 1650.0160
LEU 1660.0159
SER 1670.0285
SER 1680.0358
GLY 1690.0224
VAL 1710.0058
HIS 1720.0012
THR 1730.0053
PHE 1740.0033
PRO 1750.0053
ALA 1760.0064
VAL 1770.0069
LEU 1780.0127
GLN 1790.0309
SER 1800.1010
ASP 1830.0171
LEU 1840.0177
TYR 1850.0177
THR 1860.0103
LEU 1870.0093
SER 1880.0081
SER 1890.0036
SER 1900.0023
VAL 1910.0051
THR 1920.0143
VAL 1930.0111
PRO 1940.0073
SER 1950.0082
SER 1960.0085
PRO 1980.0106
ARG 1990.0143
PRO 2000.0180
SER 2020.0260
GLU 2030.0164
THR 2040.0121
VAL 2050.0102
THR 2060.0101
CYS 2080.0104
ASN 2090.0099
VAL 2100.0145
ALA 2110.0233
HIS 2120.0138
PRO 2130.0205
ALA 2140.0073
SER 2150.0206
SER 2160.0300
THR 2170.0254
LYS 2180.0304
VAL 2190.0232
ASP 2200.0115
LYS 2210.0109
LYS 2220.0112
ILE 2230.0133
VAL 2260.0173
PRO 2270.0151
ARG 2280.0122
ASP 2320.0196
CYS 2330.0204

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.