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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0933
ILE 4790.0183
PHE 4800.0139
ILE 4810.0097
SER 4820.0120
ASP 4830.0109
ASP 4840.0093
LYS 4850.0036
ASP 4860.0055
SER 4870.0093
LEU 4880.0061
LYS 4890.0066
CYS 4900.0100
PRO 4910.0116
CYS 4920.0102
ASP 4930.0090
PRO 4940.0064
GLU 4950.0044
MET 4960.0042
VAL 4970.0058
SER 4980.0040
GLN 4990.0026
SER 5000.0121
THR 5010.0110
CYS 5020.0028
ARG 5030.0063
PHE 5040.0062
PHE 5050.0054
VAL 5060.0043
CYS 5070.0067
LYS 5080.0072
CYS 5090.0114
VAL 5100.0173
GLU 5110.0226
ARG 5120.0817
SER 20.0153
VAL 30.0080
LEU 40.0038
SER 50.0120
GLN 60.0111
SER 70.0149
PRO 80.0120
ALA 90.0114
ILE 100.0086
LEU 110.0065
SER 120.0092
ALA 130.0105
SER 140.0158
PRO 150.0166
GLY 160.0189
GLU 170.0185
LYS 180.0156
VAL 190.0117
THR 200.0059
MET 210.0086
THR 220.0127
CYS 230.0120
ARG 240.0143
ALA 250.0095
ARG 260.0072
SER 270.0286
SER 290.0300
VAL 300.0201
SER 310.0174
TYR 320.0032
MET 330.0024
HIS 340.0018
TRP 350.0020
TYR 360.0032
GLN 370.0051
GLN 380.0069
LYS 390.0104
SER 400.0135
GLY 410.0278
SER 420.0178
SER 430.0086
PRO 440.0055
LYS 450.0058
PRO 460.0059
TRP 470.0061
ILE 480.0061
HIS 490.0064
ALA 500.0044
THR 510.0025
SER 520.0056
ASN 530.0113
LEU 540.0118
ALA 550.0109
SER 560.0130
GLY 570.0133
VAL 580.0127
PRO 590.0085
ALA 600.0131
ARG 610.0138
PHE 620.0100
SER 630.0093
GLY 640.0074
SER 650.0098
GLY 660.0167
SER 670.0239
GLY 680.0307
THR 690.0243
SER 700.0246
TYR 710.0095
SER 720.0100
LEU 730.0086
THR 740.0103
ILE 750.0096
SER 760.0153
ARG 770.0174
VAL 780.0121
GLU 790.0123
ALA 800.0090
GLU 810.0089
ASP 820.0101
ALA 830.0121
ALA 840.0070
THR 850.0023
TYR 860.0037
TYR 870.0030
CYS 880.0021
GLN 890.0016
GLN 900.0034
TRP 910.0049
SER 920.0093
SER 930.0124
HIS 940.0111
PRO 950.0060
PRO 960.0046
THR 970.0032
PHE 980.0028
GLY 990.0045
SER 1000.0062
GLY 1010.0072
THR 1020.0045
LYS 1030.0044
LEU 1040.0070
GLU 1050.0087
ILE 1060.0095
LYS 1070.0059
ARG 1080.0020
ALA 1090.0069
ASP 1100.0079
ALA 1110.0063
ALA 1120.0073
PRO 1130.0037
THR 1140.0051
VAL 1150.0048
SER 1160.0050
ILE 1170.0066
PHE 1180.0067
PRO 1190.0098
PRO 1200.0092
SER 1210.0098
SER 1220.0104
GLU 1230.0151
GLN 1240.0172
LEU 1250.0173
THR 1260.0303
SER 1270.0395
GLY 1280.0242
GLY 1290.0229
ALA 1300.0158
SER 1310.0089
VAL 1320.0091
VAL 1330.0085
CYS 1340.0062
PHE 1350.0042
LEU 1360.0032
ASN 1370.0049
ASN 1380.0053
PHE 1390.0016
TYR 1400.0048
PRO 1410.0101
LYS 1420.0128
ASP 1430.0164
ILE 1440.0122
ASN 1450.0121
VAL 1460.0109
LYS 1470.0082
TRP 1480.0065
LYS 1490.0053
ILE 1500.0063
ASP 1510.0129
GLY 1520.0290
SER 1530.0229
GLU 1540.0195
ARG 1550.0062
GLN 1560.0077
ASN 1570.0106
GLY 1580.0018
VAL 1590.0043
LEU 1600.0074
ASN 1610.0059
SER 1620.0070
TRP 1630.0085
THR 1640.0158
ASP 1650.0199
GLN 1660.0182
ASP 1670.0317
SER 1680.0323
LYS 1690.0394
ASP 1700.0238
SER 1710.0140
THR 1720.0097
TYR 1730.0084
SER 1740.0057
MET 1750.0033
SER 1760.0018
SER 1770.0031
THR 1780.0041
LEU 1790.0092
THR 1800.0094
LEU 1810.0111
THR 1820.0165
LYS 1830.0129
ASP 1840.0069
GLU 1850.0073
TYR 1860.0088
GLU 1870.0048
ARG 1880.0048
HIS 1890.0086
ASN 1900.0125
SER 1910.0140
TYR 1920.0121
THR 1930.0118
CYS 1940.0110
GLU 1950.0119
ALA 1960.0140
THR 1970.0139
HIS 1980.0132
LYS 1990.0134
THR 2000.0194
SER 2010.0279
THR 2020.0470
SER 2030.0205
PRO 2040.0179
ILE 2050.0152
VAL 2060.0117
LYS 2070.0090
SER 2080.0084
PHE 2090.0119
ASN 2100.0127
ARG 2110.0130
ASN 2120.0146
GLU 2130.0113
CYS 2140.0097
GLU 10.0492
VAL 20.0300
GLN 30.0310
LEU 40.0111
VAL 50.0104
GLU 60.0124
SER 70.0181
GLY 80.0238
GLY 90.0214
GLY 100.0217
LEU 110.0162
VAL 120.0180
LYS 130.0096
PRO 140.0139
GLY 150.0257
GLY 160.0175
SER 170.0182
LEU 180.0225
LYS 190.0186
LEU 200.0147
SER 210.0133
CYS 220.0056
ALA 230.0085
ALA 240.0097
SER 250.0150
GLY 260.0134
PHE 270.0091
ILE 280.0119
PHE 290.0077
SER 300.0106
ASP 310.0075
TYR 320.0067
TYR 330.0071
MET 340.0037
TYR 350.0033
TRP 360.0021
VAL 370.0031
ARG 380.0049
GLN 390.0066
THR 400.0160
PRO 410.0220
GLU 420.0339
LYS 430.0186
ARG 440.0151
LEU 450.0066
GLU 460.0046
TRP 470.0048
VAL 480.0032
ALA 490.0029
THR 500.0038
ILE 510.0034
SER 520.0070
ASP 520.0074
GLY 530.0086
ASN 540.0085
SER 550.0097
TYR 560.0068
THR 570.0079
TYR 580.0102
TYR 590.0129
VAL 600.0170
ASP 610.0600
SER 620.0468
VAL 630.0247
LYS 640.0395
GLY 650.0439
ARG 660.0286
PHE 670.0169
THR 680.0192
ILE 690.0133
SER 700.0063
ARG 710.0059
ASP 720.0132
ASN 730.0195
ALA 740.0293
LYS 750.0257
ASN 760.0122
ASN 770.0088
LEU 780.0043
TYR 790.0103
LEU 800.0134
GLN 810.0190
MET 820.0213
SER 820.0197
SER 820.0138
LEU 820.0137
LYS 830.0157
SER 840.0226
GLU 850.0227
ASP 860.0152
THR 870.0181
ALA 880.0128
ILE 890.0103
TYR 900.0084
TYR 910.0048
CYS 920.0055
ALA 930.0045
ARG 940.0088
ASP 950.0076
GLY 960.0082
PRO 970.0133
THR 980.0189
ASP 990.0185
SER 1000.0098
SER 1000.0082
GLY 1000.0068
TYR 1000.0038
GLY 1000.0035
GLY 1000.0036
PHE 1000.0054
GLY 1010.0076
TYR 1020.0092
TRP 1030.0039
GLY 1040.0054
GLN 1050.0042
GLY 1060.0128
THR 1070.0157
LEU 1080.0179
VAL 1090.0239
THR 1100.0232
VAL 1110.0225
SER 1120.0180
GLU 1130.0249
ALA 1140.0338
LYS 1150.0376
THR 1160.0174
THR 1170.0175
PRO 1180.0108
PRO 1190.0037
SER 1200.0042
VAL 1210.0112
TYR 1220.0118
PRO 1230.0115
LEU 1240.0069
ALA 1250.0063
PRO 1260.0064
GLY 1270.0036
SER 1280.0051
ALA 1290.0072
ALA 1300.0074
GLN 1330.0092
THR 1340.0116
ASN 1350.0129
SER 1360.0096
MET 1370.0054
VAL 1380.0066
THR 1390.0061
LEU 1400.0076
GLY 1410.0089
CYS 1420.0110
LEU 1430.0081
VAL 1440.0047
LYS 1450.0070
GLY 1460.0102
TYR 1470.0144
PHE 1480.0184
PRO 1490.0176
GLU 1500.0175
PRO 1510.0153
VAL 1520.0079
THR 1530.0088
VAL 1540.0102
THR 1560.0196
TRP 1570.0134
ASN 1620.0175
SER 1630.0211
GLY 1640.0391
SER 1650.0486
LEU 1660.0359
SER 1670.0426
SER 1680.0370
GLY 1690.0156
VAL 1710.0111
HIS 1720.0089
THR 1730.0080
PHE 1740.0086
PRO 1750.0112
ALA 1760.0097
VAL 1770.0143
LEU 1780.0149
GLN 1790.0235
SER 1800.0933
ASP 1830.0255
LEU 1840.0215
TYR 1850.0225
THR 1860.0063
LEU 1870.0076
SER 1880.0078
SER 1890.0095
SER 1900.0084
VAL 1910.0070
THR 1920.0056
VAL 1930.0042
PRO 1940.0043
SER 1950.0046
SER 1960.0025
PRO 1980.0074
ARG 1990.0089
PRO 2000.0115
SER 2020.0154
GLU 2030.0095
THR 2040.0113
VAL 2050.0085
THR 2060.0084
CYS 2080.0118
ASN 2090.0115
VAL 2100.0114
ALA 2110.0063
HIS 2120.0051
PRO 2130.0082
ALA 2140.0125
SER 2150.0117
SER 2160.0074
THR 2170.0030
LYS 2180.0092
VAL 2190.0135
ASP 2200.0111
LYS 2210.0106
LYS 2220.0083
ILE 2230.0074
VAL 2260.0060
PRO 2270.0095
ARG 2280.0100
ASP 2320.0216
CYS 2330.0121

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.