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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0796
ILE 4790.0262
PHE 4800.0189
ILE 4810.0070
SER 4820.0043
ASP 4830.0132
ASP 4840.0246
LYS 4850.0156
ASP 4860.0163
SER 4870.0150
LEU 4880.0090
LYS 4890.0084
CYS 4900.0076
PRO 4910.0088
CYS 4920.0059
ASP 4930.0038
PRO 4940.0098
GLU 4950.0161
MET 4960.0212
VAL 4970.0270
SER 4980.0118
GLN 4990.0203
SER 5000.0424
THR 5010.0185
CYS 5020.0174
ARG 5030.0152
PHE 5040.0159
PHE 5050.0200
VAL 5060.0105
CYS 5070.0038
LYS 5080.0075
CYS 5090.0063
VAL 5100.0098
GLU 5110.0106
ARG 5120.0603
SER 20.0014
VAL 30.0038
LEU 40.0033
SER 50.0045
GLN 60.0020
SER 70.0018
PRO 80.0021
ALA 90.0024
ILE 100.0030
LEU 110.0040
SER 120.0039
ALA 130.0041
SER 140.0057
PRO 150.0060
GLY 160.0083
GLU 170.0074
LYS 180.0056
VAL 190.0066
THR 200.0033
MET 210.0028
THR 220.0031
CYS 230.0026
ARG 240.0052
ALA 250.0043
ARG 260.0080
SER 270.0085
SER 290.0062
VAL 300.0043
SER 310.0048
TYR 320.0040
MET 330.0031
HIS 340.0021
TRP 350.0037
TYR 360.0038
GLN 370.0037
GLN 380.0057
LYS 390.0069
SER 400.0096
GLY 410.0125
SER 420.0098
SER 430.0089
PRO 440.0064
LYS 450.0047
PRO 460.0043
TRP 470.0038
ILE 480.0025
HIS 490.0029
ALA 500.0034
THR 510.0028
SER 520.0027
ASN 530.0039
LEU 540.0041
ALA 550.0054
SER 560.0154
GLY 570.0157
VAL 580.0081
PRO 590.0034
ALA 600.0032
ARG 610.0033
PHE 620.0043
SER 630.0042
GLY 640.0044
SER 650.0036
GLY 660.0048
SER 670.0077
GLY 680.0082
THR 690.0068
SER 700.0065
TYR 710.0030
SER 720.0032
LEU 730.0038
THR 740.0060
ILE 750.0045
SER 760.0040
ARG 770.0047
VAL 780.0029
GLU 790.0038
ALA 800.0037
GLU 810.0055
ASP 820.0039
ALA 830.0036
ALA 840.0039
THR 850.0040
TYR 860.0034
TYR 870.0034
CYS 880.0035
GLN 890.0027
GLN 900.0033
TRP 910.0049
SER 920.0052
SER 930.0054
HIS 940.0056
PRO 950.0073
PRO 960.0058
THR 970.0044
PHE 980.0033
GLY 990.0032
SER 1000.0052
GLY 1010.0013
THR 1020.0019
LYS 1030.0022
LEU 1040.0032
GLU 1050.0024
ILE 1060.0022
LYS 1070.0038
ARG 1080.0026
ALA 1090.0028
ASP 1100.0070
ALA 1110.0059
ALA 1120.0059
PRO 1130.0035
THR 1140.0060
VAL 1150.0036
SER 1160.0012
ILE 1170.0042
PHE 1180.0081
PRO 1190.0107
PRO 1200.0067
SER 1210.0048
SER 1220.0123
GLU 1230.0159
GLN 1240.0150
LEU 1250.0184
THR 1260.0399
SER 1270.0469
GLY 1280.0255
GLY 1290.0207
ALA 1300.0113
SER 1310.0066
VAL 1320.0073
VAL 1330.0070
CYS 1340.0017
PHE 1350.0025
LEU 1360.0034
ASN 1370.0043
ASN 1380.0033
PHE 1390.0025
TYR 1400.0028
PRO 1410.0033
LYS 1420.0022
ASP 1430.0034
ILE 1440.0023
ASN 1450.0036
VAL 1460.0044
LYS 1470.0039
TRP 1480.0037
LYS 1490.0039
ILE 1500.0036
ASP 1510.0052
GLY 1520.0072
SER 1530.0056
GLU 1540.0076
ARG 1550.0069
GLN 1560.0047
ASN 1570.0048
GLY 1580.0043
VAL 1590.0044
LEU 1600.0068
ASN 1610.0058
SER 1620.0077
TRP 1630.0073
THR 1640.0040
ASP 1650.0017
GLN 1660.0016
ASP 1670.0044
SER 1680.0077
LYS 1690.0112
ASP 1700.0051
SER 1710.0036
THR 1720.0016
TYR 1730.0016
SER 1740.0035
MET 1750.0046
SER 1760.0045
SER 1770.0019
THR 1780.0013
LEU 1790.0072
THR 1800.0074
LEU 1810.0093
THR 1820.0118
LYS 1830.0117
ASP 1840.0122
GLU 1850.0085
TYR 1860.0093
GLU 1870.0080
ARG 1880.0051
HIS 1890.0040
ASN 1900.0085
SER 1910.0075
TYR 1920.0067
THR 1930.0050
CYS 1940.0023
GLU 1950.0026
ALA 1960.0038
THR 1970.0040
HIS 1980.0036
LYS 1990.0051
THR 2000.0051
SER 2010.0017
THR 2020.0080
SER 2030.0063
PRO 2040.0046
ILE 2050.0013
VAL 2060.0009
LYS 2070.0017
SER 2080.0056
PHE 2090.0116
ASN 2100.0110
ARG 2110.0115
ASN 2120.0232
GLU 2130.0239
CYS 2140.0279
GLU 10.0796
VAL 20.0333
GLN 30.0358
LEU 40.0083
VAL 50.0079
GLU 60.0112
SER 70.0146
GLY 80.0148
GLY 90.0078
GLY 100.0165
LEU 110.0170
VAL 120.0170
LYS 130.0291
PRO 140.0272
GLY 150.0222
GLY 160.0079
SER 170.0093
LEU 180.0126
LYS 190.0175
LEU 200.0164
SER 210.0154
CYS 220.0154
ALA 230.0165
ALA 240.0181
SER 250.0055
GLY 260.0100
PHE 270.0092
ILE 280.0227
PHE 290.0181
SER 300.0151
ASP 310.0118
TYR 320.0054
TYR 330.0051
MET 340.0084
TYR 350.0130
TRP 360.0169
VAL 370.0171
ARG 380.0138
GLN 390.0109
THR 400.0122
PRO 410.0407
GLU 420.0493
LYS 430.0264
ARG 440.0152
LEU 450.0044
GLU 460.0118
TRP 470.0139
VAL 480.0161
ALA 490.0200
THR 500.0155
ILE 510.0114
SER 520.0143
ASP 520.0117
GLY 530.0203
ASN 540.0261
SER 550.0143
TYR 560.0196
THR 570.0187
TYR 580.0185
TYR 590.0215
VAL 600.0237
ASP 610.0294
SER 620.0276
VAL 630.0189
LYS 640.0159
GLY 650.0149
ARG 660.0112
PHE 670.0152
THR 680.0143
ILE 690.0148
SER 700.0151
ARG 710.0100
ASP 720.0243
ASN 730.0339
ALA 740.0532
LYS 750.0509
ASN 760.0248
ASN 770.0177
LEU 780.0109
TYR 790.0133
LEU 800.0171
GLN 810.0152
MET 820.0146
SER 820.0129
SER 820.0124
LEU 820.0082
LYS 830.0140
SER 840.0157
GLU 850.0100
ASP 860.0028
THR 870.0072
ALA 880.0073
ILE 890.0120
TYR 900.0148
TYR 910.0127
CYS 920.0121
ALA 930.0102
ARG 940.0014
ASP 950.0028
GLY 960.0093
PRO 970.0199
THR 980.0246
ASP 990.0249
SER 1000.0112
SER 1000.0099
GLY 1000.0109
TYR 1000.0090
GLY 1000.0071
GLY 1000.0031
PHE 1000.0020
GLY 1010.0056
TYR 1020.0078
TRP 1030.0062
GLY 1040.0070
GLN 1050.0098
GLY 1060.0136
THR 1070.0104
LEU 1080.0042
VAL 1090.0042
THR 1100.0097
VAL 1110.0127
SER 1120.0229
GLU 1130.0330
ALA 1140.0248
LYS 1150.0410
THR 1160.0274
THR 1170.0253
PRO 1180.0120
PRO 1190.0119
SER 1200.0135
VAL 1210.0156
TYR 1220.0121
PRO 1230.0067
LEU 1240.0046
ALA 1250.0057
PRO 1260.0097
GLY 1270.0265
SER 1280.0227
ALA 1290.0242
ALA 1300.0354
GLN 1330.0477
THR 1340.0390
ASN 1350.0362
SER 1360.0145
MET 1370.0177
VAL 1380.0216
THR 1390.0034
LEU 1400.0022
GLY 1410.0016
CYS 1420.0076
LEU 1430.0091
VAL 1440.0086
LYS 1450.0135
GLY 1460.0118
TYR 1470.0107
PHE 1480.0144
PRO 1490.0122
GLU 1500.0082
PRO 1510.0063
VAL 1520.0013
THR 1530.0022
VAL 1540.0048
THR 1560.0082
TRP 1570.0085
ASN 1620.0169
SER 1630.0179
GLY 1640.0150
SER 1650.0165
LEU 1660.0105
SER 1670.0043
SER 1680.0173
GLY 1690.0127
VAL 1710.0062
HIS 1720.0064
THR 1730.0067
PHE 1740.0104
PRO 1750.0112
ALA 1760.0113
VAL 1770.0168
LEU 1780.0157
GLN 1790.0178
SER 1800.0285
ASP 1830.0185
LEU 1840.0181
TYR 1850.0159
THR 1860.0112
LEU 1870.0100
SER 1880.0096
SER 1890.0042
SER 1900.0039
VAL 1910.0038
THR 1920.0092
VAL 1930.0118
PRO 1940.0151
SER 1950.0149
SER 1960.0179
PRO 1980.0224
ARG 1990.0206
PRO 2000.0192
SER 2020.0228
GLU 2030.0210
THR 2040.0132
VAL 2050.0105
THR 2060.0104
CYS 2080.0098
ASN 2090.0098
VAL 2100.0094
ALA 2110.0135
HIS 2120.0061
PRO 2130.0138
ALA 2140.0123
SER 2150.0068
SER 2160.0192
THR 2170.0181
LYS 2180.0186
VAL 2190.0200
ASP 2200.0124
LYS 2210.0136
LYS 2220.0123
ILE 2230.0119
VAL 2260.0223
PRO 2270.0196
ARG 2280.0190
ASP 2320.0634
CYS 2330.0166

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.