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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0874
ILE 4790.0207
PHE 4800.0129
ILE 4810.0075
SER 4820.0150
ASP 4830.0224
ASP 4840.0233
LYS 4850.0107
ASP 4860.0167
SER 4870.0205
LEU 4880.0098
LYS 4890.0156
CYS 4900.0135
PRO 4910.0144
CYS 4920.0131
ASP 4930.0093
PRO 4940.0043
GLU 4950.0074
MET 4960.0087
VAL 4970.0149
SER 4980.0065
GLN 4990.0168
SER 5000.0221
THR 5010.0225
CYS 5020.0118
ARG 5030.0085
PHE 5040.0140
PHE 5050.0143
VAL 5060.0060
CYS 5070.0088
LYS 5080.0166
CYS 5090.0169
VAL 5100.0165
GLU 5110.0167
ARG 5120.0138
SER 20.0222
VAL 30.0258
LEU 40.0096
SER 50.0079
GLN 60.0135
SER 70.0180
PRO 80.0172
ALA 90.0223
ILE 100.0194
LEU 110.0160
SER 120.0200
ALA 130.0199
SER 140.0260
PRO 150.0255
GLY 160.0232
GLU 170.0208
LYS 180.0121
VAL 190.0113
THR 200.0145
MET 210.0158
THR 220.0186
CYS 230.0173
ARG 240.0087
ALA 250.0140
ARG 260.0454
SER 270.0488
SER 290.0271
VAL 300.0168
SER 310.0281
TYR 320.0215
MET 330.0217
HIS 340.0231
TRP 350.0175
TYR 360.0173
GLN 370.0169
GLN 380.0097
LYS 390.0141
SER 400.0288
GLY 410.0713
SER 420.0473
SER 430.0177
PRO 440.0150
LYS 450.0207
PRO 460.0234
TRP 470.0172
ILE 480.0138
HIS 490.0179
ALA 500.0238
THR 510.0238
SER 520.0164
ASN 530.0191
LEU 540.0157
ALA 550.0143
SER 560.0764
GLY 570.0874
VAL 580.0425
PRO 590.0407
ALA 600.0425
ARG 610.0308
PHE 620.0109
SER 630.0126
GLY 640.0155
SER 650.0256
GLY 660.0188
SER 670.0231
GLY 680.0338
THR 690.0211
SER 700.0207
TYR 710.0204
SER 720.0200
LEU 730.0190
THR 740.0121
ILE 750.0106
SER 760.0213
ARG 770.0189
VAL 780.0192
GLU 790.0287
ALA 800.0186
GLU 810.0209
ASP 820.0194
ALA 830.0172
ALA 840.0121
THR 850.0108
TYR 860.0110
TYR 870.0141
CYS 880.0161
GLN 890.0178
GLN 900.0148
TRP 910.0127
SER 920.0111
SER 930.0090
HIS 940.0096
PRO 950.0071
PRO 960.0105
THR 970.0132
PHE 980.0097
GLY 990.0079
SER 1000.0071
GLY 1010.0165
THR 1020.0119
LYS 1030.0122
LEU 1040.0153
GLU 1050.0173
ILE 1060.0186
LYS 1070.0179
ARG 1080.0055
ALA 1090.0085
ASP 1100.0269
ALA 1110.0231
ALA 1120.0223
PRO 1130.0080
THR 1140.0090
VAL 1150.0058
SER 1160.0050
ILE 1170.0056
PHE 1180.0069
PRO 1190.0048
PRO 1200.0046
SER 1210.0051
SER 1220.0045
GLU 1230.0069
GLN 1240.0078
LEU 1250.0087
THR 1260.0130
SER 1270.0166
GLY 1280.0142
GLY 1290.0119
ALA 1300.0074
SER 1310.0047
VAL 1320.0044
VAL 1330.0051
CYS 1340.0031
PHE 1350.0014
LEU 1360.0022
ASN 1370.0089
ASN 1380.0125
PHE 1390.0129
TYR 1400.0154
PRO 1410.0155
LYS 1420.0150
ASP 1430.0180
ILE 1440.0107
ASN 1450.0167
VAL 1460.0135
LYS 1470.0105
TRP 1480.0057
LYS 1490.0025
ILE 1500.0053
ASP 1510.0095
GLY 1520.0216
SER 1530.0167
GLU 1540.0169
ARG 1550.0084
GLN 1560.0077
ASN 1570.0091
GLY 1580.0089
VAL 1590.0087
LEU 1600.0097
ASN 1610.0113
SER 1620.0096
TRP 1630.0124
THR 1640.0197
ASP 1650.0213
GLN 1660.0117
ASP 1670.0287
SER 1680.0247
LYS 1690.0458
ASP 1700.0216
SER 1710.0100
THR 1720.0092
TYR 1730.0091
SER 1740.0080
MET 1750.0075
SER 1760.0031
SER 1770.0053
THR 1780.0065
LEU 1790.0072
THR 1800.0066
LEU 1810.0052
THR 1820.0092
LYS 1830.0104
ASP 1840.0102
GLU 1850.0076
TYR 1860.0072
GLU 1870.0091
ARG 1880.0099
HIS 1890.0082
ASN 1900.0079
SER 1910.0075
TYR 1920.0042
THR 1930.0015
CYS 1940.0073
GLU 1950.0130
ALA 1960.0139
THR 1970.0181
HIS 1980.0118
LYS 1990.0237
THR 2000.0280
SER 2010.0139
THR 2020.0068
SER 2030.0387
PRO 2040.0313
ILE 2050.0199
VAL 2060.0148
LYS 2070.0092
SER 2080.0073
PHE 2090.0085
ASN 2100.0071
ARG 2110.0064
ASN 2120.0112
GLU 2130.0157
CYS 2140.0201
GLU 10.0420
VAL 20.0215
GLN 30.0159
LEU 40.0037
VAL 50.0078
GLU 60.0097
SER 70.0077
GLY 80.0053
GLY 90.0075
GLY 100.0121
LEU 110.0113
VAL 120.0136
LYS 130.0212
PRO 140.0091
GLY 150.0089
GLY 160.0127
SER 170.0134
LEU 180.0120
LYS 190.0050
LEU 200.0034
SER 210.0038
CYS 220.0066
ALA 230.0073
ALA 240.0059
SER 250.0128
GLY 260.0164
PHE 270.0099
ILE 280.0069
PHE 290.0060
SER 300.0059
ASP 310.0041
TYR 320.0060
TYR 330.0088
MET 340.0067
TYR 350.0060
TRP 360.0054
VAL 370.0078
ARG 380.0058
GLN 390.0053
THR 400.0091
PRO 410.0287
GLU 420.0377
LYS 430.0237
ARG 440.0150
LEU 450.0047
GLU 460.0053
TRP 470.0056
VAL 480.0060
ALA 490.0079
THR 500.0084
ILE 510.0091
SER 520.0115
ASP 520.0085
GLY 530.0108
ASN 540.0143
SER 550.0108
TYR 560.0121
THR 570.0131
TYR 580.0077
TYR 590.0036
VAL 600.0060
ASP 610.0248
SER 620.0247
VAL 630.0175
LYS 640.0218
GLY 650.0245
ARG 660.0204
PHE 670.0096
THR 680.0081
ILE 690.0051
SER 700.0054
ARG 710.0048
ASP 720.0032
ASN 730.0048
ALA 740.0039
LYS 750.0049
ASN 760.0043
ASN 770.0039
LEU 780.0037
TYR 790.0030
LEU 800.0037
GLN 810.0059
MET 820.0137
SER 820.0163
SER 820.0158
LEU 820.0108
LYS 830.0129
SER 840.0123
GLU 850.0119
ASP 860.0084
THR 870.0076
ALA 880.0040
ILE 890.0056
TYR 900.0069
TYR 910.0072
CYS 920.0072
ALA 930.0062
ARG 940.0103
ASP 950.0119
GLY 960.0115
PRO 970.0128
THR 980.0154
ASP 990.0200
SER 1000.0137
SER 1000.0140
GLY 1000.0165
TYR 1000.0186
GLY 1000.0186
GLY 1000.0159
PHE 1000.0133
GLY 1010.0106
TYR 1020.0087
TRP 1030.0104
GLY 1040.0095
GLN 1050.0112
GLY 1060.0089
THR 1070.0071
LEU 1080.0068
VAL 1090.0086
THR 1100.0081
VAL 1110.0082
SER 1120.0091
GLU 1130.0190
ALA 1140.0052
LYS 1150.0113
THR 1160.0084
THR 1170.0090
PRO 1180.0070
PRO 1190.0021
SER 1200.0028
VAL 1210.0075
TYR 1220.0066
PRO 1230.0074
LEU 1240.0077
ALA 1250.0087
PRO 1260.0102
GLY 1270.0164
SER 1280.0176
ALA 1290.0166
ALA 1300.0215
GLN 1330.0238
THR 1340.0218
ASN 1350.0212
SER 1360.0089
MET 1370.0096
VAL 1380.0104
THR 1390.0037
LEU 1400.0057
GLY 1410.0066
CYS 1420.0077
LEU 1430.0067
VAL 1440.0052
LYS 1450.0031
GLY 1460.0026
TYR 1470.0048
PHE 1480.0082
PRO 1490.0086
GLU 1500.0084
PRO 1510.0056
VAL 1520.0045
THR 1530.0094
VAL 1540.0073
THR 1560.0098
TRP 1570.0078
ASN 1620.0090
SER 1630.0094
GLY 1640.0128
SER 1650.0163
LEU 1660.0134
SER 1670.0161
SER 1680.0181
GLY 1690.0067
VAL 1710.0030
HIS 1720.0016
THR 1730.0019
PHE 1740.0051
PRO 1750.0073
ALA 1760.0057
VAL 1770.0103
LEU 1780.0099
GLN 1790.0096
SER 1800.0101
ASP 1830.0092
LEU 1840.0058
TYR 1850.0048
THR 1860.0048
LEU 1870.0038
SER 1880.0048
SER 1890.0052
SER 1900.0041
VAL 1910.0035
THR 1920.0057
VAL 1930.0082
PRO 1940.0101
SER 1950.0087
SER 1960.0135
PRO 1980.0119
ARG 1990.0040
PRO 2000.0026
SER 2020.0059
GLU 2030.0089
THR 2040.0065
VAL 2050.0068
THR 2060.0088
CYS 2080.0102
ASN 2090.0099
VAL 2100.0094
ALA 2110.0089
HIS 2120.0037
PRO 2130.0071
ALA 2140.0068
SER 2150.0121
SER 2160.0133
THR 2170.0099
LYS 2180.0128
VAL 2190.0108
ASP 2200.0098
LYS 2210.0095
LYS 2220.0101
ILE 2230.0098
VAL 2260.0131
PRO 2270.0130
ARG 2280.0123
ASP 2320.0322
CYS 2330.0171

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.