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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 58  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0937
ILE 4790.0046
PHE 4800.0042
ILE 4810.0023
SER 4820.0028
ASP 4830.0059
ASP 4840.0063
LYS 4850.0029
ASP 4860.0023
SER 4870.0019
LEU 4880.0010
LYS 4890.0011
CYS 4900.0011
PRO 4910.0021
CYS 4920.0020
ASP 4930.0021
PRO 4940.0043
GLU 4950.0057
MET 4960.0060
VAL 4970.0062
SER 4980.0059
GLN 4990.0041
SER 5000.0107
THR 5010.0138
CYS 5020.0120
ARG 5030.0084
PHE 5040.0060
PHE 5050.0064
VAL 5060.0036
CYS 5070.0025
LYS 5080.0032
CYS 5090.0020
VAL 5100.0052
GLU 5110.0075
ARG 5120.0260
SER 20.0029
VAL 30.0032
LEU 40.0025
SER 50.0032
GLN 60.0026
SER 70.0033
PRO 80.0021
ALA 90.0015
ILE 100.0015
LEU 110.0027
SER 120.0019
ALA 130.0010
SER 140.0035
PRO 150.0023
GLY 160.0017
GLU 170.0020
LYS 180.0031
VAL 190.0039
THR 200.0035
MET 210.0032
THR 220.0031
CYS 230.0035
ARG 240.0058
ALA 250.0066
ARG 260.0084
SER 270.0084
SER 290.0104
VAL 300.0073
SER 310.0066
TYR 320.0026
MET 330.0027
HIS 340.0027
TRP 350.0023
TYR 360.0021
GLN 370.0018
GLN 380.0039
LYS 390.0108
SER 400.0192
GLY 410.0391
SER 420.0233
SER 430.0081
PRO 440.0052
LYS 450.0032
PRO 460.0004
TRP 470.0021
ILE 480.0022
HIS 490.0021
ALA 500.0036
THR 510.0031
SER 520.0036
ASN 530.0037
LEU 540.0038
ALA 550.0033
SER 560.0070
GLY 570.0063
VAL 580.0039
PRO 590.0017
ALA 600.0024
ARG 610.0026
PHE 620.0028
SER 630.0029
GLY 640.0030
SER 650.0031
GLY 660.0054
SER 670.0096
GLY 680.0109
THR 690.0095
SER 700.0084
TYR 710.0041
SER 720.0031
LEU 730.0028
THR 740.0039
ILE 750.0034
SER 760.0036
ARG 770.0020
VAL 780.0021
GLU 790.0017
ALA 800.0051
GLU 810.0031
ASP 820.0016
ALA 830.0018
ALA 840.0010
THR 850.0029
TYR 860.0026
TYR 870.0034
CYS 880.0038
GLN 890.0021
GLN 900.0021
TRP 910.0015
SER 920.0026
SER 930.0036
HIS 940.0033
PRO 950.0013
PRO 960.0010
THR 970.0017
PHE 980.0027
GLY 990.0028
SER 1000.0026
GLY 1010.0027
THR 1020.0017
LYS 1030.0016
LEU 1040.0013
GLU 1050.0015
ILE 1060.0009
LYS 1070.0041
ARG 1080.0056
ALA 1090.0079
ASP 1100.0043
ALA 1110.0029
ALA 1120.0045
PRO 1130.0115
THR 1140.0140
VAL 1150.0112
SER 1160.0142
ILE 1170.0152
PHE 1180.0183
PRO 1190.0115
PRO 1200.0117
SER 1210.0138
SER 1220.0233
GLU 1230.0223
GLN 1240.0128
LEU 1250.0171
THR 1260.0321
SER 1270.0262
GLY 1280.0081
GLY 1290.0132
ALA 1300.0120
SER 1310.0213
VAL 1320.0196
VAL 1330.0200
CYS 1340.0122
PHE 1350.0105
LEU 1360.0082
ASN 1370.0061
ASN 1380.0064
PHE 1390.0062
TYR 1400.0037
PRO 1410.0050
LYS 1420.0062
ASP 1430.0064
ILE 1440.0093
ASN 1450.0197
VAL 1460.0139
LYS 1470.0114
TRP 1480.0110
LYS 1490.0133
ILE 1500.0211
ASP 1510.0225
GLY 1520.0220
SER 1530.0106
GLU 1540.0276
ARG 1550.0197
GLN 1560.0237
ASN 1570.0266
GLY 1580.0246
VAL 1590.0243
LEU 1600.0253
ASN 1610.0166
SER 1620.0152
TRP 1630.0116
THR 1640.0055
ASP 1650.0042
GLN 1660.0037
ASP 1670.0121
SER 1680.0141
LYS 1690.0313
ASP 1700.0129
SER 1710.0067
THR 1720.0042
TYR 1730.0055
SER 1740.0063
MET 1750.0064
SER 1760.0161
SER 1770.0175
THR 1780.0227
LEU 1790.0315
THR 1800.0283
LEU 1810.0235
THR 1820.0339
LYS 1830.0222
ASP 1840.0398
GLU 1850.0269
TYR 1860.0145
GLU 1870.0156
ARG 1880.0195
HIS 1890.0064
ASN 1900.0172
SER 1910.0182
TYR 1920.0155
THR 1930.0155
CYS 1940.0022
GLU 1950.0149
ALA 1960.0209
THR 1970.0254
HIS 1980.0122
LYS 1990.0111
THR 2000.0192
SER 2010.0369
THR 2020.0605
SER 2030.0427
PRO 2040.0397
ILE 2050.0348
VAL 2060.0223
LYS 2070.0161
SER 2080.0169
PHE 2090.0208
ASN 2100.0176
ARG 2110.0109
ASN 2120.0265
GLU 2130.0181
CYS 2140.0168
GLU 10.0312
VAL 20.0151
GLN 30.0170
LEU 40.0036
VAL 50.0014
GLU 60.0047
SER 70.0100
GLY 80.0113
GLY 90.0113
GLY 100.0140
LEU 110.0082
VAL 120.0054
LYS 130.0133
PRO 140.0149
GLY 150.0169
GLY 160.0103
SER 170.0089
LEU 180.0108
LYS 190.0075
LEU 200.0075
SER 210.0075
CYS 220.0023
ALA 230.0037
ALA 240.0076
SER 250.0015
GLY 260.0026
PHE 270.0078
ILE 280.0130
PHE 290.0099
SER 300.0076
ASP 310.0054
TYR 320.0034
TYR 330.0019
MET 340.0024
TYR 350.0044
TRP 360.0060
VAL 370.0049
ARG 380.0038
GLN 390.0039
THR 400.0048
PRO 410.0059
GLU 420.0070
LYS 430.0073
ARG 440.0076
LEU 450.0065
GLU 460.0037
TRP 470.0043
VAL 480.0043
ALA 490.0057
THR 500.0050
ILE 510.0040
SER 520.0017
ASP 520.0021
GLY 530.0042
ASN 540.0054
SER 550.0029
TYR 560.0032
THR 570.0046
TYR 580.0061
TYR 590.0055
VAL 600.0043
ASP 610.0131
SER 620.0130
VAL 630.0083
LYS 640.0119
GLY 650.0140
ARG 660.0112
PHE 670.0058
THR 680.0069
ILE 690.0074
SER 700.0089
ARG 710.0055
ASP 720.0127
ASN 730.0162
ALA 740.0275
LYS 750.0254
ASN 760.0120
ASN 770.0063
LEU 780.0013
TYR 790.0055
LEU 800.0064
GLN 810.0065
MET 820.0088
SER 820.0114
SER 820.0132
LEU 820.0097
LYS 830.0139
SER 840.0160
GLU 850.0138
ASP 860.0078
THR 870.0112
ALA 880.0053
ILE 890.0058
TYR 900.0054
TYR 910.0045
CYS 920.0038
ALA 930.0037
ARG 940.0025
ASP 950.0020
GLY 960.0049
PRO 970.0041
THR 980.0053
ASP 990.0043
SER 1000.0020
SER 1000.0020
GLY 1000.0024
TYR 1000.0021
GLY 1000.0019
GLY 1000.0014
PHE 1000.0015
GLY 1010.0018
TYR 1020.0026
TRP 1030.0020
GLY 1040.0021
GLN 1050.0034
GLY 1060.0091
THR 1070.0093
LEU 1080.0096
VAL 1090.0127
THR 1100.0122
VAL 1110.0087
SER 1120.0130
GLU 1130.0182
ALA 1140.0122
LYS 1150.0183
THR 1160.0143
THR 1170.0122
PRO 1180.0107
PRO 1190.0139
SER 1200.0193
VAL 1210.0155
TYR 1220.0114
PRO 1230.0061
LEU 1240.0085
ALA 1250.0089
PRO 1260.0084
GLY 1270.0215
SER 1280.0172
ALA 1290.0809
ALA 1300.0611
GLN 1330.0758
THR 1340.0525
ASN 1350.0197
SER 1360.0132
MET 1370.0068
VAL 1380.0237
THR 1390.0122
LEU 1400.0092
GLY 1410.0053
CYS 1420.0072
LEU 1430.0103
VAL 1440.0141
LYS 1450.0182
GLY 1460.0162
TYR 1470.0145
PHE 1480.0115
PRO 1490.0116
GLU 1500.0116
PRO 1510.0113
VAL 1520.0055
THR 1530.0061
VAL 1540.0026
THR 1560.0064
TRP 1570.0055
ASN 1620.0111
SER 1630.0122
GLY 1640.0152
SER 1650.0170
LEU 1660.0076
SER 1670.0093
SER 1680.0243
GLY 1690.0246
VAL 1710.0098
HIS 1720.0055
THR 1730.0044
PHE 1740.0114
PRO 1750.0156
ALA 1760.0178
VAL 1770.0234
LEU 1780.0168
GLN 1790.0131
SER 1800.0469
ASP 1830.0073
LEU 1840.0106
TYR 1850.0153
THR 1860.0183
LEU 1870.0143
SER 1880.0108
SER 1890.0026
SER 1900.0060
VAL 1910.0105
THR 1920.0270
VAL 1930.0247
PRO 1940.0199
SER 1950.0265
SER 1960.0391
PRO 1980.0353
ARG 1990.0241
PRO 2000.0178
SER 2020.0208
GLU 2030.0198
THR 2040.0221
VAL 2050.0111
THR 2060.0079
CYS 2080.0028
ASN 2090.0057
VAL 2100.0046
ALA 2110.0111
HIS 2120.0059
PRO 2130.0113
ALA 2140.0131
SER 2150.0057
SER 2160.0146
THR 2170.0176
LYS 2180.0226
VAL 2190.0203
ASP 2200.0038
LYS 2210.0053
LYS 2220.0068
ILE 2230.0086
VAL 2260.0147
PRO 2270.0189
ARG 2280.0170
ASP 2320.0937
CYS 2330.0277

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.