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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0606
ILE 4790.0551
PHE 4800.0315
ILE 4810.0208
SER 4820.0208
ASP 4830.0221
ASP 4840.0222
LYS 4850.0101
ASP 4860.0152
SER 4870.0230
LEU 4880.0157
LYS 4890.0190
CYS 4900.0197
PRO 4910.0213
CYS 4920.0205
ASP 4930.0184
PRO 4940.0153
GLU 4950.0155
MET 4960.0138
VAL 4970.0167
SER 4980.0080
GLN 4990.0126
SER 5000.0326
THR 5010.0223
CYS 5020.0039
ARG 5030.0128
PHE 5040.0138
PHE 5050.0158
VAL 5060.0140
CYS 5070.0195
LYS 5080.0218
CYS 5090.0218
VAL 5100.0228
GLU 5110.0277
ARG 5120.0512
SER 20.0055
VAL 30.0052
LEU 40.0065
SER 50.0131
GLN 60.0119
SER 70.0162
PRO 80.0133
ALA 90.0103
ILE 100.0048
LEU 110.0038
SER 120.0076
ALA 130.0135
SER 140.0216
PRO 150.0226
GLY 160.0299
GLU 170.0226
LYS 180.0133
VAL 190.0032
THR 200.0154
MET 210.0137
THR 220.0132
CYS 230.0089
ARG 240.0160
ALA 250.0224
ARG 260.0363
SER 270.0249
SER 290.0316
VAL 300.0227
SER 310.0194
TYR 320.0112
MET 330.0067
HIS 340.0081
TRP 350.0045
TYR 360.0040
GLN 370.0044
GLN 380.0038
LYS 390.0073
SER 400.0092
GLY 410.0147
SER 420.0081
SER 430.0042
PRO 440.0031
LYS 450.0061
PRO 460.0106
TRP 470.0066
ILE 480.0089
HIS 490.0130
ALA 500.0152
THR 510.0093
SER 520.0149
ASN 530.0177
LEU 540.0157
ALA 550.0152
SER 560.0278
GLY 570.0194
VAL 580.0070
PRO 590.0044
ALA 600.0053
ARG 610.0091
PHE 620.0080
SER 630.0108
GLY 640.0120
SER 650.0097
GLY 660.0063
SER 670.0176
GLY 680.0275
THR 690.0257
SER 700.0193
TYR 710.0093
SER 720.0105
LEU 730.0115
THR 740.0152
ILE 750.0114
SER 760.0131
ARG 770.0221
VAL 780.0131
GLU 790.0152
ALA 800.0085
GLU 810.0097
ASP 820.0074
ALA 830.0050
ALA 840.0066
THR 850.0075
TYR 860.0064
TYR 870.0063
CYS 880.0064
GLN 890.0080
GLN 900.0089
TRP 910.0117
SER 920.0157
SER 930.0155
HIS 940.0154
PRO 950.0098
PRO 960.0076
THR 970.0052
PHE 980.0070
GLY 990.0099
SER 1000.0108
GLY 1010.0106
THR 1020.0087
LYS 1030.0065
LEU 1040.0027
GLU 1050.0032
ILE 1060.0059
LYS 1070.0156
ARG 1080.0101
ALA 1090.0102
ASP 1100.0103
ALA 1110.0103
ALA 1120.0101
PRO 1130.0031
THR 1140.0034
VAL 1150.0040
SER 1160.0041
ILE 1170.0040
PHE 1180.0044
PRO 1190.0033
PRO 1200.0037
SER 1210.0038
SER 1220.0054
GLU 1230.0055
GLN 1240.0027
LEU 1250.0078
THR 1260.0153
SER 1270.0164
GLY 1280.0104
GLY 1290.0078
ALA 1300.0048
SER 1310.0033
VAL 1320.0025
VAL 1330.0032
CYS 1340.0025
PHE 1350.0019
LEU 1360.0014
ASN 1370.0049
ASN 1380.0051
PHE 1390.0049
TYR 1400.0080
PRO 1410.0077
LYS 1420.0068
ASP 1430.0034
ILE 1440.0029
ASN 1450.0026
VAL 1460.0015
LYS 1470.0013
TRP 1480.0010
LYS 1490.0040
ILE 1500.0047
ASP 1510.0051
GLY 1520.0057
SER 1530.0050
GLU 1540.0041
ARG 1550.0028
GLN 1560.0028
ASN 1570.0030
GLY 1580.0029
VAL 1590.0027
LEU 1600.0029
ASN 1610.0024
SER 1620.0024
TRP 1630.0025
THR 1640.0031
ASP 1650.0026
GLN 1660.0025
ASP 1670.0047
SER 1680.0050
LYS 1690.0062
ASP 1700.0027
SER 1710.0031
THR 1720.0054
TYR 1730.0042
SER 1740.0039
MET 1750.0034
SER 1760.0011
SER 1770.0014
THR 1780.0020
LEU 1790.0038
THR 1800.0050
LEU 1810.0052
THR 1820.0087
LYS 1830.0056
ASP 1840.0056
GLU 1850.0078
TYR 1860.0061
GLU 1870.0052
ARG 1880.0088
HIS 1890.0060
ASN 1900.0025
SER 1910.0036
TYR 1920.0045
THR 1930.0050
CYS 1940.0030
GLU 1950.0024
ALA 1960.0018
THR 1970.0031
HIS 1980.0026
LYS 1990.0060
THR 2000.0091
SER 2010.0039
THR 2020.0056
SER 2030.0102
PRO 2040.0077
ILE 2050.0073
VAL 2060.0066
LYS 2070.0067
SER 2080.0065
PHE 2090.0052
ASN 2100.0034
ARG 2110.0021
ASN 2120.0089
GLU 2130.0094
CYS 2140.0098
GLU 10.0606
VAL 20.0387
GLN 30.0408
LEU 40.0187
VAL 50.0186
GLU 60.0180
SER 70.0194
GLY 80.0189
GLY 90.0200
GLY 100.0209
LEU 110.0162
VAL 120.0146
LYS 130.0121
PRO 140.0186
GLY 150.0155
GLY 160.0136
SER 170.0125
LEU 180.0158
LYS 190.0127
LEU 200.0141
SER 210.0154
CYS 220.0158
ALA 230.0145
ALA 240.0159
SER 250.0096
GLY 260.0117
PHE 270.0156
ILE 280.0195
PHE 290.0141
SER 300.0112
ASP 310.0100
TYR 320.0132
TYR 330.0152
MET 340.0100
TYR 350.0112
TRP 360.0106
VAL 370.0102
ARG 380.0088
GLN 390.0042
THR 400.0120
PRO 410.0302
GLU 420.0467
LYS 430.0277
ARG 440.0243
LEU 450.0142
GLU 460.0074
TRP 470.0061
VAL 480.0076
ALA 490.0035
THR 500.0070
ILE 510.0083
SER 520.0075
ASP 520.0047
GLY 530.0044
ASN 540.0084
SER 550.0044
TYR 560.0050
THR 570.0064
TYR 580.0089
TYR 590.0090
VAL 600.0164
ASP 610.0599
SER 620.0554
VAL 630.0290
LYS 640.0349
GLY 650.0340
ARG 660.0209
PHE 670.0075
THR 680.0042
ILE 690.0078
SER 700.0201
ARG 710.0146
ASP 720.0255
ASN 730.0269
ALA 740.0461
LYS 750.0434
ASN 760.0197
ASN 770.0151
LEU 780.0106
TYR 790.0124
LEU 800.0109
GLN 810.0117
MET 820.0109
SER 820.0109
SER 820.0125
LEU 820.0120
LYS 830.0164
SER 840.0201
GLU 850.0208
ASP 860.0192
THR 870.0204
ALA 880.0096
ILE 890.0113
TYR 900.0145
TYR 910.0133
CYS 920.0145
ALA 930.0133
ARG 940.0221
ASP 950.0223
GLY 960.0228
PRO 970.0312
THR 980.0412
ASP 990.0381
SER 1000.0207
SER 1000.0211
GLY 1000.0214
TYR 1000.0183
GLY 1000.0175
GLY 1000.0163
PHE 1000.0170
GLY 1010.0182
TYR 1020.0189
TRP 1030.0107
GLY 1040.0117
GLN 1050.0099
GLY 1060.0148
THR 1070.0151
LEU 1080.0139
VAL 1090.0203
THR 1100.0188
VAL 1110.0171
SER 1120.0190
GLU 1130.0289
ALA 1140.0194
LYS 1150.0172
THR 1160.0101
THR 1170.0108
PRO 1180.0060
PRO 1190.0041
SER 1200.0038
VAL 1210.0025
TYR 1220.0029
PRO 1230.0050
LEU 1240.0031
ALA 1250.0020
PRO 1260.0027
GLY 1270.0096
SER 1280.0033
ALA 1290.0198
ALA 1300.0218
GLN 1330.0299
THR 1340.0167
ASN 1350.0059
SER 1360.0101
MET 1370.0063
VAL 1380.0051
THR 1390.0038
LEU 1400.0038
GLY 1410.0040
CYS 1420.0034
LEU 1430.0025
VAL 1440.0013
LYS 1450.0035
GLY 1460.0044
TYR 1470.0045
PHE 1480.0057
PRO 1490.0046
GLU 1500.0028
PRO 1510.0044
VAL 1520.0049
THR 1530.0068
VAL 1540.0049
THR 1560.0055
TRP 1570.0060
ASN 1620.0113
SER 1630.0132
GLY 1640.0102
SER 1650.0082
LEU 1660.0033
SER 1670.0080
SER 1680.0196
GLY 1690.0124
VAL 1710.0030
HIS 1720.0028
THR 1730.0031
PHE 1740.0022
PRO 1750.0015
ALA 1760.0021
VAL 1770.0024
LEU 1780.0029
GLN 1790.0053
SER 1800.0194
ASP 1830.0075
LEU 1840.0068
TYR 1850.0052
THR 1860.0022
LEU 1870.0012
SER 1880.0021
SER 1890.0020
SER 1900.0022
VAL 1910.0036
THR 1920.0061
VAL 1930.0052
PRO 1940.0053
SER 1950.0052
SER 1960.0105
PRO 1980.0081
ARG 1990.0045
PRO 2000.0057
SER 2020.0143
GLU 2030.0088
THR 2040.0028
VAL 2050.0064
THR 2060.0065
CYS 2080.0065
ASN 2090.0064
VAL 2100.0060
ALA 2110.0075
HIS 2120.0050
PRO 2130.0071
ALA 2140.0053
SER 2150.0048
SER 2160.0073
THR 2170.0065
LYS 2180.0072
VAL 2190.0066
ASP 2200.0055
LYS 2210.0056
LYS 2220.0056
ILE 2230.0055
VAL 2260.0017
PRO 2270.0085
ARG 2280.0089
ASP 2320.0553
CYS 2330.0190

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.