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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1075
ILE 4790.0258
PHE 4800.0113
ILE 4810.0105
SER 4820.0103
ASP 4830.0077
ASP 4840.0058
LYS 4850.0044
ASP 4860.0086
SER 4870.0105
LEU 4880.0072
LYS 4890.0083
CYS 4900.0070
PRO 4910.0069
CYS 4920.0068
ASP 4930.0060
PRO 4940.0064
GLU 4950.0065
MET 4960.0050
VAL 4970.0068
SER 4980.0037
GLN 4990.0031
SER 5000.0165
THR 5010.0083
CYS 5020.0051
ARG 5030.0095
PHE 5040.0059
PHE 5050.0011
VAL 5060.0028
CYS 5070.0060
LYS 5080.0083
CYS 5090.0060
VAL 5100.0054
GLU 5110.0058
ARG 5120.0096
SER 20.0022
VAL 30.0022
LEU 40.0019
SER 50.0015
GLN 60.0022
SER 70.0029
PRO 80.0085
ALA 90.0105
ILE 100.0125
LEU 110.0115
SER 120.0138
ALA 130.0130
SER 140.0129
PRO 150.0134
GLY 160.0104
GLU 170.0088
LYS 180.0115
VAL 190.0062
THR 200.0092
MET 210.0063
THR 220.0059
CYS 230.0046
ARG 240.0050
ALA 250.0043
ARG 260.0030
SER 270.0092
SER 290.0096
VAL 300.0061
SER 310.0058
TYR 320.0049
MET 330.0038
HIS 340.0033
TRP 350.0054
TYR 360.0055
GLN 370.0055
GLN 380.0066
LYS 390.0304
SER 400.0576
GLY 410.1075
SER 420.0626
SER 430.0132
PRO 440.0023
LYS 450.0080
PRO 460.0159
TRP 470.0129
ILE 480.0056
HIS 490.0020
ALA 500.0036
THR 510.0049
SER 520.0051
ASN 530.0188
LEU 540.0219
ALA 550.0233
SER 560.1037
GLY 570.0895
VAL 580.0334
PRO 590.0105
ALA 600.0183
ARG 610.0168
PHE 620.0088
SER 630.0089
GLY 640.0084
SER 650.0097
GLY 660.0106
SER 670.0107
GLY 680.0107
THR 690.0102
SER 700.0106
TYR 710.0087
SER 720.0093
LEU 730.0094
THR 740.0131
ILE 750.0150
SER 760.0187
ARG 770.0190
VAL 780.0120
GLU 790.0199
ALA 800.0117
GLU 810.0156
ASP 820.0116
ALA 830.0114
ALA 840.0101
THR 850.0091
TYR 860.0027
TYR 870.0023
CYS 880.0033
GLN 890.0036
GLN 900.0034
TRP 910.0038
SER 920.0035
SER 930.0034
HIS 940.0037
PRO 950.0038
PRO 960.0038
THR 970.0036
PHE 980.0028
GLY 990.0034
SER 1000.0028
GLY 1010.0041
THR 1020.0056
LYS 1030.0083
LEU 1040.0108
GLU 1050.0123
ILE 1060.0131
LYS 1070.0158
ARG 1080.0178
ALA 1090.0238
ASP 1100.0215
ALA 1110.0200
ALA 1120.0203
PRO 1130.0069
THR 1140.0087
VAL 1150.0076
SER 1160.0096
ILE 1170.0090
PHE 1180.0096
PRO 1190.0136
PRO 1200.0112
SER 1210.0076
SER 1220.0177
GLU 1230.0134
GLN 1240.0091
LEU 1250.0211
THR 1260.0324
SER 1270.0297
GLY 1280.0198
GLY 1290.0090
ALA 1300.0123
SER 1310.0097
VAL 1320.0102
VAL 1330.0108
CYS 1340.0060
PHE 1350.0082
LEU 1360.0068
ASN 1370.0125
ASN 1380.0118
PHE 1390.0107
TYR 1400.0152
PRO 1410.0128
LYS 1420.0124
ASP 1430.0187
ILE 1440.0191
ASN 1450.0319
VAL 1460.0247
LYS 1470.0183
TRP 1480.0049
LYS 1490.0038
ILE 1500.0097
ASP 1510.0112
GLY 1520.0560
SER 1530.0537
GLU 1540.0597
ARG 1550.0169
GLN 1560.0324
ASN 1570.0461
GLY 1580.0251
VAL 1590.0201
LEU 1600.0176
ASN 1610.0157
SER 1620.0165
TRP 1630.0134
THR 1640.0152
ASP 1650.0132
GLN 1660.0085
ASP 1670.0124
SER 1680.0084
LYS 1690.0210
ASP 1700.0197
SER 1710.0119
THR 1720.0111
TYR 1730.0084
SER 1740.0104
MET 1750.0115
SER 1760.0121
SER 1770.0113
THR 1780.0127
LEU 1790.0166
THR 1800.0132
LEU 1810.0125
THR 1820.0134
LYS 1830.0168
ASP 1840.0195
GLU 1850.0156
TYR 1860.0150
GLU 1870.0161
ARG 1880.0123
HIS 1890.0120
ASN 1900.0134
SER 1910.0032
TYR 1920.0075
THR 1930.0098
CYS 1940.0135
GLU 1950.0267
ALA 1960.0325
THR 1970.0397
HIS 1980.0245
LYS 1990.0194
THR 2000.0349
SER 2010.0349
THR 2020.0545
SER 2030.0678
PRO 2040.0588
ILE 2050.0375
VAL 2060.0269
LYS 2070.0145
SER 2080.0136
PHE 2090.0119
ASN 2100.0134
ARG 2110.0134
ASN 2120.0217
GLU 2130.0223
CYS 2140.0221
GLU 10.0237
VAL 20.0147
GLN 30.0138
LEU 40.0053
VAL 50.0055
GLU 60.0065
SER 70.0078
GLY 80.0082
GLY 90.0056
GLY 100.0045
LEU 110.0043
VAL 120.0066
LYS 130.0132
PRO 140.0038
GLY 150.0132
GLY 160.0079
SER 170.0055
LEU 180.0049
LYS 190.0076
LEU 200.0068
SER 210.0071
CYS 220.0054
ALA 230.0052
ALA 240.0054
SER 250.0066
GLY 260.0071
PHE 270.0060
ILE 280.0054
PHE 290.0027
SER 300.0024
ASP 310.0027
TYR 320.0037
TYR 330.0044
MET 340.0027
TYR 350.0029
TRP 360.0033
VAL 370.0021
ARG 380.0023
GLN 390.0024
THR 400.0132
PRO 410.0226
GLU 420.0292
LYS 430.0107
ARG 440.0105
LEU 450.0071
GLU 460.0020
TRP 470.0020
VAL 480.0031
ALA 490.0034
THR 500.0029
ILE 510.0028
SER 520.0035
ASP 520.0037
GLY 530.0059
ASN 540.0062
SER 550.0043
TYR 560.0031
THR 570.0052
TYR 580.0045
TYR 590.0048
VAL 600.0046
ASP 610.0141
SER 620.0094
VAL 630.0040
LYS 640.0080
GLY 650.0098
ARG 660.0082
PHE 670.0070
THR 680.0074
ILE 690.0061
SER 700.0045
ARG 710.0022
ASP 720.0036
ASN 730.0053
ALA 740.0095
LYS 750.0092
ASN 760.0042
ASN 770.0038
LEU 780.0039
TYR 790.0060
LEU 800.0069
GLN 810.0074
MET 820.0087
SER 820.0086
SER 820.0099
LEU 820.0090
LYS 830.0103
SER 840.0093
GLU 850.0112
ASP 860.0093
THR 870.0069
ALA 880.0037
ILE 890.0037
TYR 900.0037
TYR 910.0019
CYS 920.0037
ALA 930.0029
ARG 940.0033
ASP 950.0041
GLY 960.0045
PRO 970.0050
THR 980.0156
ASP 990.0252
SER 1000.0071
SER 1000.0067
GLY 1000.0081
TYR 1000.0080
GLY 1000.0071
GLY 1000.0046
PHE 1000.0027
GLY 1010.0019
TYR 1020.0011
TRP 1030.0048
GLY 1040.0062
GLN 1050.0064
GLY 1060.0045
THR 1070.0045
LEU 1080.0039
VAL 1090.0055
THR 1100.0044
VAL 1110.0047
SER 1120.0092
GLU 1130.0205
ALA 1140.0139
LYS 1150.0139
THR 1160.0078
THR 1170.0080
PRO 1180.0055
PRO 1190.0047
SER 1200.0040
VAL 1210.0057
TYR 1220.0039
PRO 1230.0045
LEU 1240.0067
ALA 1250.0085
PRO 1260.0103
GLY 1270.0160
SER 1280.0150
ALA 1290.0304
ALA 1300.0215
GLN 1330.0230
THR 1340.0190
ASN 1350.0085
SER 1360.0201
MET 1370.0146
VAL 1380.0119
THR 1390.0067
LEU 1400.0068
GLY 1410.0070
CYS 1420.0042
LEU 1430.0024
VAL 1440.0029
LYS 1450.0031
GLY 1460.0023
TYR 1470.0025
PHE 1480.0036
PRO 1490.0024
GLU 1500.0018
PRO 1510.0095
VAL 1520.0083
THR 1530.0099
VAL 1540.0100
THR 1560.0151
TRP 1570.0114
ASN 1620.0228
SER 1630.0294
GLY 1640.0229
SER 1650.0264
LEU 1660.0133
SER 1670.0130
SER 1680.0344
GLY 1690.0290
VAL 1710.0162
HIS 1720.0167
THR 1730.0164
PHE 1740.0139
PRO 1750.0137
ALA 1760.0158
VAL 1770.0178
LEU 1780.0138
GLN 1790.0171
SER 1800.0153
ASP 1830.0095
LEU 1840.0062
TYR 1850.0051
THR 1860.0105
LEU 1870.0094
SER 1880.0088
SER 1890.0097
SER 1900.0098
VAL 1910.0090
THR 1920.0054
VAL 1930.0065
PRO 1940.0107
SER 1950.0147
SER 1960.0063
PRO 1980.0046
ARG 1990.0124
PRO 2000.0189
SER 2020.0294
GLU 2030.0166
THR 2040.0117
VAL 2050.0098
THR 2060.0111
CYS 2080.0125
ASN 2090.0121
VAL 2100.0114
ALA 2110.0105
HIS 2120.0100
PRO 2130.0123
ALA 2140.0104
SER 2150.0107
SER 2160.0133
THR 2170.0095
LYS 2180.0097
VAL 2190.0092
ASP 2200.0102
LYS 2210.0108
LYS 2220.0116
ILE 2230.0081
VAL 2260.0109
PRO 2270.0104
ARG 2280.0071
ASP 2320.0269
CYS 2330.0149

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.