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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0817
ILE 4790.0334
PHE 4800.0170
ILE 4810.0127
SER 4820.0112
ASP 4830.0081
ASP 4840.0019
LYS 4850.0051
ASP 4860.0099
SER 4870.0108
LEU 4880.0102
LYS 4890.0104
CYS 4900.0076
PRO 4910.0036
CYS 4920.0035
ASP 4930.0033
PRO 4940.0094
GLU 4950.0100
MET 4960.0078
VAL 4970.0073
SER 4980.0056
GLN 4990.0037
SER 5000.0161
THR 5010.0160
CYS 5020.0136
ARG 5030.0138
PHE 5040.0065
PHE 5050.0030
VAL 5060.0058
CYS 5070.0089
LYS 5080.0106
CYS 5090.0053
VAL 5100.0055
GLU 5110.0051
ARG 5120.0104
SER 20.0034
VAL 30.0029
LEU 40.0031
SER 50.0054
GLN 60.0057
SER 70.0113
PRO 80.0150
ALA 90.0176
ILE 100.0168
LEU 110.0119
SER 120.0146
ALA 130.0138
SER 140.0182
PRO 150.0200
GLY 160.0187
GLU 170.0160
LYS 180.0137
VAL 190.0061
THR 200.0109
MET 210.0071
THR 220.0096
CYS 230.0038
ARG 240.0044
ALA 250.0045
ARG 260.0095
SER 270.0042
SER 290.0063
VAL 300.0055
SER 310.0051
TYR 320.0065
MET 330.0047
HIS 340.0039
TRP 350.0035
TYR 360.0035
GLN 370.0033
GLN 380.0044
LYS 390.0095
SER 400.0151
GLY 410.0331
SER 420.0207
SER 430.0059
PRO 440.0012
LYS 450.0048
PRO 460.0074
TRP 470.0082
ILE 480.0044
HIS 490.0045
ALA 500.0058
THR 510.0056
SER 520.0052
ASN 530.0142
LEU 540.0146
ALA 550.0143
SER 560.0757
GLY 570.0636
VAL 580.0221
PRO 590.0089
ALA 600.0147
ARG 610.0164
PHE 620.0091
SER 630.0088
GLY 640.0084
SER 650.0060
GLY 660.0058
SER 670.0058
GLY 680.0029
THR 690.0045
SER 700.0052
TYR 710.0060
SER 720.0074
LEU 730.0083
THR 740.0138
ILE 750.0155
SER 760.0212
ARG 770.0214
VAL 780.0139
GLU 790.0206
ALA 800.0098
GLU 810.0112
ASP 820.0094
ALA 830.0085
ALA 840.0086
THR 850.0080
TYR 860.0031
TYR 870.0036
CYS 880.0033
GLN 890.0049
GLN 900.0047
TRP 910.0036
SER 920.0040
SER 930.0034
HIS 940.0024
PRO 950.0010
PRO 960.0027
THR 970.0043
PHE 980.0056
GLY 990.0057
SER 1000.0061
GLY 1010.0069
THR 1020.0073
LYS 1030.0103
LEU 1040.0110
GLU 1050.0124
ILE 1060.0126
LYS 1070.0144
ARG 1080.0088
ALA 1090.0073
ASP 1100.0101
ALA 1110.0119
ALA 1120.0141
PRO 1130.0098
THR 1140.0106
VAL 1150.0100
SER 1160.0119
ILE 1170.0121
PHE 1180.0127
PRO 1190.0203
PRO 1200.0155
SER 1210.0142
SER 1220.0396
GLU 1230.0372
GLN 1240.0246
LEU 1250.0334
THR 1260.0575
SER 1270.0481
GLY 1280.0208
GLY 1290.0111
ALA 1300.0201
SER 1310.0174
VAL 1320.0170
VAL 1330.0156
CYS 1340.0114
PHE 1350.0089
LEU 1360.0096
ASN 1370.0116
ASN 1380.0113
PHE 1390.0111
TYR 1400.0078
PRO 1410.0056
LYS 1420.0063
ASP 1430.0065
ILE 1440.0052
ASN 1450.0049
VAL 1460.0143
LYS 1470.0106
TRP 1480.0041
LYS 1490.0196
ILE 1500.0240
ASP 1510.0317
GLY 1520.0609
SER 1530.0652
GLU 1540.0817
ARG 1550.0242
GLN 1560.0128
ASN 1570.0434
GLY 1580.0420
VAL 1590.0340
LEU 1600.0298
ASN 1610.0216
SER 1620.0170
TRP 1630.0192
THR 1640.0141
ASP 1650.0099
GLN 1660.0087
ASP 1670.0101
SER 1680.0083
LYS 1690.0164
ASP 1700.0134
SER 1710.0087
THR 1720.0078
TYR 1730.0109
SER 1740.0114
MET 1750.0110
SER 1760.0116
SER 1770.0160
THR 1780.0196
LEU 1790.0228
THR 1800.0231
LEU 1810.0229
THR 1820.0273
LYS 1830.0238
ASP 1840.0262
GLU 1850.0144
TYR 1860.0103
GLU 1870.0058
ARG 1880.0261
HIS 1890.0247
ASN 1900.0249
SER 1910.0152
TYR 1920.0049
THR 1930.0076
CYS 1940.0053
GLU 1950.0066
ALA 1960.0078
THR 1970.0089
HIS 1980.0103
LYS 1990.0121
THR 2000.0102
SER 2010.0086
THR 2020.0296
SER 2030.0080
PRO 2040.0059
ILE 2050.0062
VAL 2060.0056
LYS 2070.0086
SER 2080.0082
PHE 2090.0081
ASN 2100.0154
ARG 2110.0211
ASN 2120.0219
GLU 2130.0226
CYS 2140.0309
GLU 10.0072
VAL 20.0059
GLN 30.0063
LEU 40.0076
VAL 50.0080
GLU 60.0093
SER 70.0101
GLY 80.0082
GLY 90.0063
GLY 100.0073
LEU 110.0054
VAL 120.0046
LYS 130.0091
PRO 140.0080
GLY 150.0090
GLY 160.0111
SER 170.0075
LEU 180.0046
LYS 190.0033
LEU 200.0053
SER 210.0075
CYS 220.0084
ALA 230.0083
ALA 240.0088
SER 250.0067
GLY 260.0070
PHE 270.0065
ILE 280.0048
PHE 290.0045
SER 300.0030
ASP 310.0032
TYR 320.0019
TYR 330.0005
MET 340.0045
TYR 350.0057
TRP 360.0073
VAL 370.0077
ARG 380.0060
GLN 390.0066
THR 400.0094
PRO 410.0132
GLU 420.0165
LYS 430.0119
ARG 440.0120
LEU 450.0103
GLU 460.0065
TRP 470.0076
VAL 480.0073
ALA 490.0081
THR 500.0066
ILE 510.0050
SER 520.0024
ASP 520.0034
GLY 530.0066
ASN 540.0083
SER 550.0066
TYR 560.0064
THR 570.0075
TYR 580.0087
TYR 590.0100
VAL 600.0103
ASP 610.0155
SER 620.0131
VAL 630.0114
LYS 640.0168
GLY 650.0197
ARG 660.0162
PHE 670.0085
THR 680.0094
ILE 690.0095
SER 700.0053
ARG 710.0007
ASP 720.0040
ASN 730.0060
ALA 740.0122
LYS 750.0132
ASN 760.0073
ASN 770.0050
LEU 780.0050
TYR 790.0066
LEU 800.0065
GLN 810.0054
MET 820.0079
SER 820.0122
SER 820.0156
LEU 820.0117
LYS 830.0137
SER 840.0139
GLU 850.0101
ASP 860.0053
THR 870.0082
ALA 880.0045
ILE 890.0067
TYR 900.0066
TYR 910.0068
CYS 920.0079
ALA 930.0077
ARG 940.0037
ASP 950.0032
GLY 960.0036
PRO 970.0088
THR 980.0194
ASP 990.0295
SER 1000.0096
SER 1000.0086
GLY 1000.0105
TYR 1000.0094
GLY 1000.0083
GLY 1000.0043
PHE 1000.0021
GLY 1010.0020
TYR 1020.0031
TRP 1030.0069
GLY 1040.0078
GLN 1050.0074
GLY 1060.0096
THR 1070.0091
LEU 1080.0074
VAL 1090.0067
THR 1100.0079
VAL 1110.0069
SER 1120.0066
GLU 1130.0089
ALA 1140.0023
LYS 1150.0080
THR 1160.0072
THR 1170.0068
PRO 1180.0078
PRO 1190.0101
SER 1200.0122
VAL 1210.0195
TYR 1220.0148
PRO 1230.0118
LEU 1240.0061
ALA 1250.0053
PRO 1260.0055
GLY 1270.0125
SER 1280.0052
ALA 1290.0206
ALA 1300.0210
GLN 1330.0451
THR 1340.0165
ASN 1350.0473
SER 1360.0371
MET 1370.0292
VAL 1380.0288
THR 1390.0148
LEU 1400.0147
GLY 1410.0157
CYS 1420.0103
LEU 1430.0082
VAL 1440.0093
LYS 1450.0083
GLY 1460.0081
TYR 1470.0080
PHE 1480.0063
PRO 1490.0059
GLU 1500.0048
PRO 1510.0118
VAL 1520.0086
THR 1530.0093
VAL 1540.0069
THR 1560.0019
TRP 1570.0036
ASN 1620.0171
SER 1630.0237
GLY 1640.0275
SER 1650.0280
LEU 1660.0146
SER 1670.0205
SER 1680.0224
GLY 1690.0137
VAL 1710.0045
HIS 1720.0065
THR 1730.0066
PHE 1740.0090
PRO 1750.0110
ALA 1760.0067
VAL 1770.0149
LEU 1780.0105
GLN 1790.0192
SER 1800.0314
ASP 1830.0131
LEU 1840.0116
TYR 1850.0081
THR 1860.0049
LEU 1870.0028
SER 1880.0025
SER 1890.0083
SER 1900.0089
VAL 1910.0103
THR 1920.0205
VAL 1930.0143
PRO 1940.0153
SER 1950.0161
SER 1960.0167
PRO 1980.0095
ARG 1990.0099
PRO 2000.0112
SER 2020.0061
GLU 2030.0076
THR 2040.0131
VAL 2050.0108
THR 2060.0120
CYS 2080.0089
ASN 2090.0047
VAL 2100.0071
ALA 2110.0085
HIS 2120.0087
PRO 2130.0134
ALA 2140.0120
SER 2150.0116
SER 2160.0167
THR 2170.0100
LYS 2180.0099
VAL 2190.0094
ASP 2200.0079
LYS 2210.0114
LYS 2220.0108
ILE 2230.0109
VAL 2260.0113
PRO 2270.0044
ARG 2280.0110
ASP 2320.0449
CYS 2330.0487

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.