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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0605
ILE 4790.0422
PHE 4800.0286
ILE 4810.0192
SER 4820.0109
ASP 4830.0138
ASP 4840.0108
LYS 4850.0083
ASP 4860.0119
SER 4870.0110
LEU 4880.0197
LYS 4890.0194
CYS 4900.0162
PRO 4910.0122
CYS 4920.0107
ASP 4930.0080
PRO 4940.0206
GLU 4950.0208
MET 4960.0174
VAL 4970.0225
SER 4980.0242
GLN 4990.0219
SER 5000.0315
THR 5010.0509
CYS 5020.0491
ARG 5030.0301
PHE 5040.0147
PHE 5050.0183
VAL 5060.0193
CYS 5070.0199
LYS 5080.0166
CYS 5090.0178
VAL 5100.0182
GLU 5110.0168
ARG 5120.0314
SER 20.0108
VAL 30.0116
LEU 40.0134
SER 50.0145
GLN 60.0120
SER 70.0131
PRO 80.0033
ALA 90.0072
ILE 100.0112
LEU 110.0111
SER 120.0111
ALA 130.0087
SER 140.0155
PRO 150.0134
GLY 160.0169
GLU 170.0135
LYS 180.0072
VAL 190.0079
THR 200.0084
MET 210.0083
THR 220.0098
CYS 230.0143
ARG 240.0178
ALA 250.0213
ARG 260.0172
SER 270.0179
SER 290.0237
VAL 300.0181
SER 310.0132
TYR 320.0070
MET 330.0070
HIS 340.0063
TRP 350.0048
TYR 360.0055
GLN 370.0048
GLN 380.0080
LYS 390.0105
SER 400.0129
GLY 410.0221
SER 420.0168
SER 430.0120
PRO 440.0088
LYS 450.0112
PRO 460.0128
TRP 470.0074
ILE 480.0054
HIS 490.0060
ALA 500.0071
THR 510.0063
SER 520.0055
ASN 530.0056
LEU 540.0081
ALA 550.0116
SER 560.0425
GLY 570.0343
VAL 580.0109
PRO 590.0054
ALA 600.0078
ARG 610.0089
PHE 620.0078
SER 630.0088
GLY 640.0092
SER 650.0086
GLY 660.0117
SER 670.0180
GLY 680.0220
THR 690.0225
SER 700.0202
TYR 710.0126
SER 720.0105
LEU 730.0084
THR 740.0113
ILE 750.0087
SER 760.0071
ARG 770.0102
VAL 780.0080
GLU 790.0077
ALA 800.0057
GLU 810.0078
ASP 820.0073
ALA 830.0073
ALA 840.0079
THR 850.0081
TYR 860.0053
TYR 870.0065
CYS 880.0083
GLN 890.0065
GLN 900.0045
TRP 910.0063
SER 920.0129
SER 930.0122
HIS 940.0120
PRO 950.0129
PRO 960.0099
THR 970.0089
PHE 980.0048
GLY 990.0074
SER 1000.0097
GLY 1010.0104
THR 1020.0058
LYS 1030.0077
LEU 1040.0079
GLU 1050.0092
ILE 1060.0069
LYS 1070.0114
ARG 1080.0085
ALA 1090.0080
ASP 1100.0074
ALA 1110.0082
ALA 1120.0096
PRO 1130.0096
THR 1140.0108
VAL 1150.0066
SER 1160.0036
ILE 1170.0033
PHE 1180.0039
PRO 1190.0071
PRO 1200.0065
SER 1210.0078
SER 1220.0075
GLU 1230.0110
GLN 1240.0105
LEU 1250.0093
THR 1260.0181
SER 1270.0201
GLY 1280.0073
GLY 1290.0071
ALA 1300.0051
SER 1310.0056
VAL 1320.0047
VAL 1330.0046
CYS 1340.0044
PHE 1350.0063
LEU 1360.0075
ASN 1370.0106
ASN 1380.0090
PHE 1390.0073
TYR 1400.0037
PRO 1410.0016
LYS 1420.0037
ASP 1430.0041
ILE 1440.0042
ASN 1450.0025
VAL 1460.0057
LYS 1470.0053
TRP 1480.0024
LYS 1490.0011
ILE 1500.0039
ASP 1510.0080
GLY 1520.0165
SER 1530.0082
GLU 1540.0127
ARG 1550.0098
GLN 1560.0074
ASN 1570.0067
GLY 1580.0072
VAL 1590.0081
LEU 1600.0102
ASN 1610.0110
SER 1620.0121
TRP 1630.0126
THR 1640.0072
ASP 1650.0045
GLN 1660.0025
ASP 1670.0097
SER 1680.0177
LYS 1690.0319
ASP 1700.0136
SER 1710.0080
THR 1720.0059
TYR 1730.0058
SER 1740.0091
MET 1750.0110
SER 1760.0099
SER 1770.0083
THR 1780.0069
LEU 1790.0069
THR 1800.0071
LEU 1810.0068
THR 1820.0071
LYS 1830.0060
ASP 1840.0122
GLU 1850.0075
TYR 1860.0051
GLU 1870.0054
ARG 1880.0068
HIS 1890.0057
ASN 1900.0069
SER 1910.0074
TYR 1920.0054
THR 1930.0042
CYS 1940.0037
GLU 1950.0071
ALA 1960.0086
THR 1970.0109
HIS 1980.0096
LYS 1990.0105
THR 2000.0146
SER 2010.0146
THR 2020.0293
SER 2030.0219
PRO 2040.0175
ILE 2050.0162
VAL 2060.0084
LYS 2070.0065
SER 2080.0055
PHE 2090.0098
ASN 2100.0087
ARG 2110.0074
ASN 2120.0117
GLU 2130.0145
CYS 2140.0182
GLU 10.0394
VAL 20.0244
GLN 30.0159
LEU 40.0098
VAL 50.0131
GLU 60.0163
SER 70.0142
GLY 80.0142
GLY 90.0126
GLY 100.0190
LEU 110.0172
VAL 120.0177
LYS 130.0128
PRO 140.0254
GLY 150.0356
GLY 160.0255
SER 170.0209
LEU 180.0197
LYS 190.0132
LEU 200.0126
SER 210.0167
CYS 220.0199
ALA 230.0152
ALA 240.0091
SER 250.0220
GLY 260.0245
PHE 270.0214
ILE 280.0241
PHE 290.0185
SER 300.0169
ASP 310.0122
TYR 320.0040
TYR 330.0063
MET 340.0088
TYR 350.0114
TRP 360.0136
VAL 370.0093
ARG 380.0061
GLN 390.0028
THR 400.0113
PRO 410.0168
GLU 420.0185
LYS 430.0110
ARG 440.0089
LEU 450.0036
GLU 460.0036
TRP 470.0064
VAL 480.0082
ALA 490.0140
THR 500.0136
ILE 510.0139
SER 520.0103
ASP 520.0036
GLY 530.0021
ASN 540.0093
SER 550.0159
TYR 560.0178
THR 570.0200
TYR 580.0140
TYR 590.0132
VAL 600.0123
ASP 610.0124
SER 620.0124
VAL 630.0115
LYS 640.0106
GLY 650.0129
ARG 660.0144
PHE 670.0111
THR 680.0158
ILE 690.0174
SER 700.0270
ARG 710.0190
ASP 720.0258
ASN 730.0298
ALA 740.0605
LYS 750.0531
ASN 760.0197
ASN 770.0186
LEU 780.0184
TYR 790.0158
LEU 800.0150
GLN 810.0148
MET 820.0179
SER 820.0202
SER 820.0213
LEU 820.0191
LYS 830.0180
SER 840.0168
GLU 850.0197
ASP 860.0190
THR 870.0189
ALA 880.0081
ILE 890.0062
TYR 900.0110
TYR 910.0109
CYS 920.0113
ALA 930.0117
ARG 940.0072
ASP 950.0083
GLY 960.0094
PRO 970.0091
THR 980.0065
ASP 990.0072
SER 1000.0060
SER 1000.0051
GLY 1000.0041
TYR 1000.0041
GLY 1000.0044
GLY 1000.0054
PHE 1000.0063
GLY 1010.0067
TYR 1020.0076
TRP 1030.0116
GLY 1040.0141
GLN 1050.0161
GLY 1060.0139
THR 1070.0126
LEU 1080.0090
VAL 1090.0193
THR 1100.0190
VAL 1110.0210
SER 1120.0323
GLU 1130.0460
ALA 1140.0277
LYS 1150.0397
THR 1160.0242
THR 1170.0174
PRO 1180.0184
PRO 1190.0129
SER 1200.0124
VAL 1210.0079
TYR 1220.0085
PRO 1230.0101
LEU 1240.0084
ALA 1250.0091
PRO 1260.0090
GLY 1270.0101
SER 1280.0180
ALA 1290.0331
ALA 1300.0191
GLN 1330.0392
THR 1340.0263
ASN 1350.0237
SER 1360.0288
MET 1370.0218
VAL 1380.0139
THR 1390.0081
LEU 1400.0085
GLY 1410.0091
CYS 1420.0080
LEU 1430.0052
VAL 1440.0015
LYS 1450.0048
GLY 1460.0098
TYR 1470.0127
PHE 1480.0139
PRO 1490.0147
GLU 1500.0143
PRO 1510.0086
VAL 1520.0026
THR 1530.0082
VAL 1540.0058
THR 1560.0055
TRP 1570.0060
ASN 1620.0203
SER 1630.0338
GLY 1640.0367
SER 1650.0266
LEU 1660.0111
SER 1670.0333
SER 1680.0452
GLY 1690.0263
VAL 1710.0112
HIS 1720.0099
THR 1730.0102
PHE 1740.0108
PRO 1750.0114
ALA 1760.0106
VAL 1770.0112
LEU 1780.0124
GLN 1790.0117
SER 1800.0275
ASP 1830.0107
LEU 1840.0105
TYR 1850.0105
THR 1860.0076
LEU 1870.0068
SER 1880.0069
SER 1890.0036
SER 1900.0059
VAL 1910.0073
THR 1920.0096
VAL 1930.0058
PRO 1940.0093
SER 1950.0172
SER 1960.0122
PRO 1980.0046
ARG 1990.0087
PRO 2000.0121
SER 2020.0319
GLU 2030.0216
THR 2040.0113
VAL 2050.0150
THR 2060.0144
CYS 2080.0086
ASN 2090.0078
VAL 2100.0098
ALA 2110.0162
HIS 2120.0085
PRO 2130.0098
ALA 2140.0139
SER 2150.0178
SER 2160.0197
THR 2170.0278
LYS 2180.0306
VAL 2190.0260
ASP 2200.0073
LYS 2210.0069
LYS 2220.0073
ILE 2230.0106
VAL 2260.0076
PRO 2270.0052
ARG 2280.0034
ASP 2320.0175
CYS 2330.0279

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.