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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 64  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1139
ILE 4790.0471
PHE 4800.0332
ILE 4810.0215
SER 4820.0128
ASP 4830.0079
ASP 4840.0027
LYS 4850.0108
ASP 4860.0135
SER 4870.0133
LEU 4880.0166
LYS 4890.0135
CYS 4900.0131
PRO 4910.0089
CYS 4920.0091
ASP 4930.0080
PRO 4940.0189
GLU 4950.0188
MET 4960.0159
VAL 4970.0175
SER 4980.0176
GLN 4990.0130
SER 5000.0277
THR 5010.0397
CYS 5020.0354
ARG 5030.0223
PHE 5040.0082
PHE 5050.0160
VAL 5060.0196
CYS 5070.0197
LYS 5080.0179
CYS 5090.0179
VAL 5100.0168
GLU 5110.0123
ARG 5120.0193
SER 20.0044
VAL 30.0090
LEU 40.0076
SER 50.0068
GLN 60.0049
SER 70.0100
PRO 80.0205
ALA 90.0253
ILE 100.0283
LEU 110.0181
SER 120.0194
ALA 130.0131
SER 140.0153
PRO 150.0124
GLY 160.0058
GLU 170.0068
LYS 180.0149
VAL 190.0120
THR 200.0122
MET 210.0051
THR 220.0058
CYS 230.0021
ARG 240.0036
ALA 250.0047
ARG 260.0082
SER 270.0108
SER 290.0073
VAL 300.0079
SER 310.0120
TYR 320.0117
MET 330.0113
HIS 340.0110
TRP 350.0076
TYR 360.0072
GLN 370.0064
GLN 380.0064
LYS 390.0142
SER 400.0313
GLY 410.0656
SER 420.0394
SER 430.0125
PRO 440.0084
LYS 450.0080
PRO 460.0071
TRP 470.0115
ILE 480.0061
HIS 490.0059
ALA 500.0114
THR 510.0121
SER 520.0090
ASN 530.0230
LEU 540.0231
ALA 550.0226
SER 560.1139
GLY 570.0949
VAL 580.0336
PRO 590.0122
ALA 600.0122
ARG 610.0134
PHE 620.0127
SER 630.0104
GLY 640.0085
SER 650.0101
GLY 660.0081
SER 670.0087
GLY 680.0087
THR 690.0064
SER 700.0079
TYR 710.0079
SER 720.0095
LEU 730.0119
THR 740.0148
ILE 750.0153
SER 760.0197
ARG 770.0111
VAL 780.0070
GLU 790.0164
ALA 800.0216
GLU 810.0189
ASP 820.0149
ALA 830.0143
ALA 840.0128
THR 850.0122
TYR 860.0089
TYR 870.0092
CYS 880.0092
GLN 890.0130
GLN 900.0127
TRP 910.0124
SER 920.0158
SER 930.0120
HIS 940.0095
PRO 950.0119
PRO 960.0122
THR 970.0116
PHE 980.0075
GLY 990.0061
SER 1000.0073
GLY 1010.0108
THR 1020.0100
LYS 1030.0173
LEU 1040.0180
GLU 1050.0206
ILE 1060.0188
LYS 1070.0135
ARG 1080.0048
ALA 1090.0054
ASP 1100.0337
ALA 1110.0338
ALA 1120.0367
PRO 1130.0192
THR 1140.0198
VAL 1150.0126
SER 1160.0056
ILE 1170.0089
PHE 1180.0102
PRO 1190.0124
PRO 1200.0116
SER 1210.0119
SER 1220.0134
GLU 1230.0125
GLN 1240.0141
LEU 1250.0143
THR 1260.0163
SER 1270.0191
GLY 1280.0177
GLY 1290.0175
ALA 1300.0136
SER 1310.0091
VAL 1320.0096
VAL 1330.0098
CYS 1340.0056
PHE 1350.0064
LEU 1360.0074
ASN 1370.0176
ASN 1380.0188
PHE 1390.0159
TYR 1400.0131
PRO 1410.0120
LYS 1420.0055
ASP 1430.0103
ILE 1440.0102
ASN 1450.0120
VAL 1460.0058
LYS 1470.0025
TRP 1480.0055
LYS 1490.0075
ILE 1500.0065
ASP 1510.0108
GLY 1520.0269
SER 1530.0214
GLU 1540.0160
ARG 1550.0091
GLN 1560.0096
ASN 1570.0107
GLY 1580.0088
VAL 1590.0050
LEU 1600.0055
ASN 1610.0063
SER 1620.0091
TRP 1630.0118
THR 1640.0151
ASP 1650.0105
GLN 1660.0093
ASP 1670.0125
SER 1680.0235
LYS 1690.0660
ASP 1700.0217
SER 1710.0188
THR 1720.0155
TYR 1730.0121
SER 1740.0133
MET 1750.0114
SER 1760.0044
SER 1770.0035
THR 1780.0067
LEU 1790.0115
THR 1800.0108
LEU 1810.0086
THR 1820.0165
LYS 1830.0151
ASP 1840.0128
GLU 1850.0108
TYR 1860.0093
GLU 1870.0060
ARG 1880.0089
HIS 1890.0017
ASN 1900.0067
SER 1910.0136
TYR 1920.0148
THR 1930.0175
CYS 1940.0092
GLU 1950.0035
ALA 1960.0098
THR 1970.0203
HIS 1980.0244
LYS 1990.0346
THR 2000.0379
SER 2010.0087
THR 2020.0443
SER 2030.0316
PRO 2040.0182
ILE 2050.0054
VAL 2060.0061
LYS 2070.0110
SER 2080.0164
PHE 2090.0172
ASN 2100.0117
ARG 2110.0056
ASN 2120.0156
GLU 2130.0127
CYS 2140.0137
GLU 10.0160
VAL 20.0126
GLN 30.0154
LEU 40.0077
VAL 50.0093
GLU 60.0122
SER 70.0172
GLY 80.0150
GLY 90.0118
GLY 100.0155
LEU 110.0159
VAL 120.0150
LYS 130.0172
PRO 140.0136
GLY 150.0109
GLY 160.0070
SER 170.0044
LEU 180.0090
LYS 190.0126
LEU 200.0117
SER 210.0138
CYS 220.0104
ALA 230.0087
ALA 240.0092
SER 250.0107
GLY 260.0107
PHE 270.0103
ILE 280.0102
PHE 290.0084
SER 300.0084
ASP 310.0075
TYR 320.0056
TYR 330.0051
MET 340.0028
TYR 350.0040
TRP 360.0062
VAL 370.0041
ARG 380.0039
GLN 390.0038
THR 400.0093
PRO 410.0191
GLU 420.0275
LYS 430.0151
ARG 440.0121
LEU 450.0052
GLU 460.0090
TRP 470.0100
VAL 480.0109
ALA 490.0106
THR 500.0078
ILE 510.0054
SER 520.0025
ASP 520.0064
GLY 530.0106
ASN 540.0110
SER 550.0062
TYR 560.0035
THR 570.0065
TYR 580.0108
TYR 590.0142
VAL 600.0145
ASP 610.0195
SER 620.0164
VAL 630.0160
LYS 640.0187
GLY 650.0210
ARG 660.0173
PHE 670.0131
THR 680.0140
ILE 690.0136
SER 700.0089
ARG 710.0038
ASP 720.0046
ASN 730.0097
ALA 740.0144
LYS 750.0128
ASN 760.0090
ASN 770.0061
LEU 780.0070
TYR 790.0130
LEU 800.0125
GLN 810.0121
MET 820.0117
SER 820.0101
SER 820.0115
LEU 820.0062
LYS 830.0088
SER 840.0095
GLU 850.0032
ASP 860.0017
THR 870.0068
ALA 880.0058
ILE 890.0071
TYR 900.0059
TYR 910.0034
CYS 920.0046
ALA 930.0037
ARG 940.0039
ASP 950.0035
GLY 960.0052
PRO 970.0069
THR 980.0128
ASP 990.0254
SER 1000.0031
SER 1000.0029
GLY 1000.0057
TYR 1000.0065
GLY 1000.0070
GLY 1000.0043
PHE 1000.0047
GLY 1010.0033
TYR 1020.0061
TRP 1030.0036
GLY 1040.0073
GLN 1050.0096
GLY 1060.0126
THR 1070.0096
LEU 1080.0104
VAL 1090.0119
THR 1100.0135
VAL 1110.0122
SER 1120.0153
GLU 1130.0149
ALA 1140.0144
LYS 1150.0092
THR 1160.0083
THR 1170.0062
PRO 1180.0042
PRO 1190.0025
SER 1200.0022
VAL 1210.0048
TYR 1220.0063
PRO 1230.0072
LEU 1240.0052
ALA 1250.0061
PRO 1260.0075
GLY 1270.0122
SER 1280.0128
ALA 1290.0319
ALA 1300.0252
GLN 1330.0271
THR 1340.0118
ASN 1350.0306
SER 1360.0140
MET 1370.0069
VAL 1380.0145
THR 1390.0042
LEU 1400.0021
GLY 1410.0018
CYS 1420.0037
LEU 1430.0019
VAL 1440.0016
LYS 1450.0025
GLY 1460.0040
TYR 1470.0046
PHE 1480.0071
PRO 1490.0086
GLU 1500.0093
PRO 1510.0080
VAL 1520.0054
THR 1530.0103
VAL 1540.0110
THR 1560.0123
TRP 1570.0057
ASN 1620.0162
SER 1630.0233
GLY 1640.0227
SER 1650.0325
LEU 1660.0191
SER 1670.0099
SER 1680.0344
GLY 1690.0333
VAL 1710.0167
HIS 1720.0187
THR 1730.0186
PHE 1740.0134
PRO 1750.0146
ALA 1760.0164
VAL 1770.0148
LEU 1780.0150
GLN 1790.0143
SER 1800.0209
ASP 1830.0070
LEU 1840.0076
TYR 1850.0085
THR 1860.0085
LEU 1870.0081
SER 1880.0070
SER 1890.0102
SER 1900.0097
VAL 1910.0084
THR 1920.0155
VAL 1930.0137
PRO 1940.0107
SER 1950.0100
SER 1960.0145
PRO 1980.0145
ARG 1990.0116
PRO 2000.0082
SER 2020.0075
GLU 2030.0074
THR 2040.0103
VAL 2050.0056
THR 2060.0065
CYS 2080.0090
ASN 2090.0111
VAL 2100.0128
ALA 2110.0095
HIS 2120.0029
PRO 2130.0022
ALA 2140.0060
SER 2150.0077
SER 2160.0073
THR 2170.0075
LYS 2180.0134
VAL 2190.0105
ASP 2200.0092
LYS 2210.0080
LYS 2220.0082
ILE 2230.0066
VAL 2260.0136
PRO 2270.0140
ARG 2280.0098
ASP 2320.0444
CYS 2330.0272

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.