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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 66  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0710
ILE 4790.0411
PHE 4800.0267
ILE 4810.0203
SER 4820.0117
ASP 4830.0146
ASP 4840.0115
LYS 4850.0135
ASP 4860.0167
SER 4870.0150
LEU 4880.0171
LYS 4890.0106
CYS 4900.0078
PRO 4910.0054
CYS 4920.0059
ASP 4930.0077
PRO 4940.0195
GLU 4950.0223
MET 4960.0188
VAL 4970.0194
SER 4980.0184
GLN 4990.0146
SER 5000.0307
THR 5010.0418
CYS 5020.0384
ARG 5030.0279
PHE 5040.0101
PHE 5050.0152
VAL 5060.0193
CYS 5070.0171
LYS 5080.0154
CYS 5090.0139
VAL 5100.0120
GLU 5110.0064
ARG 5120.0179
SER 20.0126
VAL 30.0170
LEU 40.0170
SER 50.0183
GLN 60.0120
SER 70.0179
PRO 80.0099
ALA 90.0091
ILE 100.0110
LEU 110.0170
SER 120.0153
ALA 130.0117
SER 140.0197
PRO 150.0153
GLY 160.0213
GLU 170.0185
LYS 180.0081
VAL 190.0102
THR 200.0154
MET 210.0116
THR 220.0116
CYS 230.0081
ARG 240.0125
ALA 250.0198
ARG 260.0323
SER 270.0125
SER 290.0121
VAL 300.0149
SER 310.0161
TYR 320.0117
MET 330.0089
HIS 340.0093
TRP 350.0038
TYR 360.0039
GLN 370.0034
GLN 380.0069
LYS 390.0192
SER 400.0327
GLY 410.0710
SER 420.0386
SER 430.0103
PRO 440.0090
LYS 450.0039
PRO 460.0066
TRP 470.0014
ILE 480.0038
HIS 490.0085
ALA 500.0153
THR 510.0101
SER 520.0130
ASN 530.0112
LEU 540.0064
ALA 550.0030
SER 560.0089
GLY 570.0138
VAL 580.0108
PRO 590.0100
ALA 600.0107
ARG 610.0121
PHE 620.0090
SER 630.0097
GLY 640.0119
SER 650.0141
GLY 660.0102
SER 670.0099
GLY 680.0079
THR 690.0058
SER 700.0051
TYR 710.0046
SER 720.0093
LEU 730.0112
THR 740.0147
ILE 750.0096
SER 760.0106
ARG 770.0166
VAL 780.0063
GLU 790.0075
ALA 800.0079
GLU 810.0092
ASP 820.0098
ALA 830.0086
ALA 840.0079
THR 850.0068
TYR 860.0010
TYR 870.0049
CYS 880.0075
GLN 890.0138
GLN 900.0144
TRP 910.0144
SER 920.0149
SER 930.0136
HIS 940.0131
PRO 950.0170
PRO 960.0171
THR 970.0172
PHE 980.0138
GLY 990.0125
SER 1000.0135
GLY 1010.0053
THR 1020.0040
LYS 1030.0088
LEU 1040.0118
GLU 1050.0114
ILE 1060.0086
LYS 1070.0151
ARG 1080.0093
ALA 1090.0105
ASP 1100.0135
ALA 1110.0150
ALA 1120.0166
PRO 1130.0126
THR 1140.0109
VAL 1150.0096
SER 1160.0053
ILE 1170.0068
PHE 1180.0077
PRO 1190.0074
PRO 1200.0054
SER 1210.0060
SER 1220.0119
GLU 1230.0079
GLN 1240.0066
LEU 1250.0110
THR 1260.0131
SER 1270.0099
GLY 1280.0123
GLY 1290.0091
ALA 1300.0085
SER 1310.0043
VAL 1320.0051
VAL 1330.0059
CYS 1340.0068
PHE 1350.0071
LEU 1360.0074
ASN 1370.0114
ASN 1380.0116
PHE 1390.0109
TYR 1400.0079
PRO 1410.0065
LYS 1420.0067
ASP 1430.0119
ILE 1440.0106
ASN 1450.0104
VAL 1460.0044
LYS 1470.0045
TRP 1480.0071
LYS 1490.0095
ILE 1500.0081
ASP 1510.0123
GLY 1520.0275
SER 1530.0190
GLU 1540.0136
ARG 1550.0143
GLN 1560.0215
ASN 1570.0328
GLY 1580.0103
VAL 1590.0074
LEU 1600.0080
ASN 1610.0057
SER 1620.0053
TRP 1630.0063
THR 1640.0041
ASP 1650.0038
GLN 1660.0013
ASP 1670.0094
SER 1680.0142
LYS 1690.0355
ASP 1700.0094
SER 1710.0070
THR 1720.0069
TYR 1730.0060
SER 1740.0075
MET 1750.0075
SER 1760.0044
SER 1770.0041
THR 1780.0052
LEU 1790.0066
THR 1800.0065
LEU 1810.0056
THR 1820.0124
LYS 1830.0141
ASP 1840.0112
GLU 1850.0083
TYR 1860.0083
GLU 1870.0065
ARG 1880.0043
HIS 1890.0028
ASN 1900.0072
SER 1910.0126
TYR 1920.0126
THR 1930.0148
CYS 1940.0087
GLU 1950.0046
ALA 1960.0049
THR 1970.0092
HIS 1980.0111
LYS 1990.0117
THR 2000.0176
SER 2010.0115
THR 2020.0112
SER 2030.0093
PRO 2040.0036
ILE 2050.0036
VAL 2060.0057
LYS 2070.0084
SER 2080.0121
PHE 2090.0113
ASN 2100.0096
ARG 2110.0080
ASN 2120.0084
GLU 2130.0100
CYS 2140.0144
GLU 10.0328
VAL 20.0134
GLN 30.0176
LEU 40.0092
VAL 50.0103
GLU 60.0090
SER 70.0166
GLY 80.0195
GLY 90.0171
GLY 100.0243
LEU 110.0209
VAL 120.0187
LYS 130.0135
PRO 140.0307
GLY 150.0239
GLY 160.0176
SER 170.0175
LEU 180.0198
LYS 190.0160
LEU 200.0109
SER 210.0125
CYS 220.0092
ALA 230.0052
ALA 240.0043
SER 250.0097
GLY 260.0038
PHE 270.0078
ILE 280.0123
PHE 290.0084
SER 300.0063
ASP 310.0120
TYR 320.0093
TYR 330.0052
MET 340.0079
TYR 350.0077
TRP 360.0072
VAL 370.0064
ARG 380.0042
GLN 390.0057
THR 400.0071
PRO 410.0198
GLU 420.0313
LYS 430.0191
ARG 440.0131
LEU 450.0074
GLU 460.0103
TRP 470.0100
VAL 480.0083
ALA 490.0091
THR 500.0091
ILE 510.0099
SER 520.0045
ASP 520.0045
GLY 530.0089
ASN 540.0067
SER 550.0044
TYR 560.0091
THR 570.0146
TYR 580.0105
TYR 590.0128
VAL 600.0143
ASP 610.0211
SER 620.0183
VAL 630.0144
LYS 640.0147
GLY 650.0135
ARG 660.0133
PHE 670.0148
THR 680.0168
ILE 690.0149
SER 700.0163
ARG 710.0119
ASP 720.0146
ASN 730.0106
ALA 740.0242
LYS 750.0232
ASN 760.0062
ASN 770.0074
LEU 780.0091
TYR 790.0130
LEU 800.0129
GLN 810.0169
MET 820.0182
SER 820.0158
SER 820.0141
LEU 820.0167
LYS 830.0163
SER 840.0194
GLU 850.0155
ASP 860.0158
THR 870.0173
ALA 880.0057
ILE 890.0062
TYR 900.0091
TYR 910.0084
CYS 920.0081
ALA 930.0084
ARG 940.0153
ASP 950.0141
GLY 960.0153
PRO 970.0277
THR 980.0356
ASP 990.0297
SER 1000.0119
SER 1000.0133
GLY 1000.0139
TYR 1000.0098
GLY 1000.0095
GLY 1000.0094
PHE 1000.0128
GLY 1010.0135
TYR 1020.0172
TRP 1030.0088
GLY 1040.0066
GLN 1050.0079
GLY 1060.0099
THR 1070.0119
LEU 1080.0125
VAL 1090.0247
THR 1100.0241
VAL 1110.0232
SER 1120.0407
GLU 1130.0461
ALA 1140.0213
LYS 1150.0137
THR 1160.0169
THR 1170.0190
PRO 1180.0179
PRO 1190.0126
SER 1200.0113
VAL 1210.0046
TYR 1220.0048
PRO 1230.0073
LEU 1240.0045
ALA 1250.0048
PRO 1260.0056
GLY 1270.0078
SER 1280.0126
ALA 1290.0404
ALA 1300.0192
GLN 1330.0180
THR 1340.0070
ASN 1350.0188
SER 1360.0076
MET 1370.0044
VAL 1380.0078
THR 1390.0085
LEU 1400.0065
GLY 1410.0068
CYS 1420.0085
LEU 1430.0050
VAL 1440.0050
LYS 1450.0109
GLY 1460.0152
TYR 1470.0167
PHE 1480.0160
PRO 1490.0157
GLU 1500.0144
PRO 1510.0150
VAL 1520.0072
THR 1530.0200
VAL 1540.0197
THR 1560.0175
TRP 1570.0082
ASN 1620.0179
SER 1630.0207
GLY 1640.0219
SER 1650.0356
LEU 1660.0285
SER 1670.0334
SER 1680.0502
GLY 1690.0416
VAL 1710.0166
HIS 1720.0138
THR 1730.0130
PHE 1740.0049
PRO 1750.0053
ALA 1760.0109
VAL 1770.0136
LEU 1780.0143
GLN 1790.0101
SER 1800.0385
ASP 1830.0142
LEU 1840.0156
TYR 1850.0166
THR 1860.0102
LEU 1870.0052
SER 1880.0054
SER 1890.0108
SER 1900.0117
VAL 1910.0116
THR 1920.0170
VAL 1930.0099
PRO 1940.0067
SER 1950.0059
SER 1960.0176
PRO 1980.0076
ARG 1990.0068
PRO 2000.0081
SER 2020.0171
GLU 2030.0200
THR 2040.0152
VAL 2050.0102
THR 2060.0142
CYS 2080.0177
ASN 2090.0219
VAL 2100.0233
ALA 2110.0202
HIS 2120.0042
PRO 2130.0035
ALA 2140.0202
SER 2150.0233
SER 2160.0154
THR 2170.0190
LYS 2180.0353
VAL 2190.0322
ASP 2200.0181
LYS 2210.0116
LYS 2220.0103
ILE 2230.0078
VAL 2260.0116
PRO 2270.0118
ARG 2280.0117
ASP 2320.0531
CYS 2330.0297

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.