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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0570
ILE 4790.0560
PHE 4800.0344
ILE 4810.0279
SER 4820.0211
ASP 4830.0227
ASP 4840.0307
LYS 4850.0175
ASP 4860.0223
SER 4870.0225
LEU 4880.0226
LYS 4890.0188
CYS 4900.0131
PRO 4910.0064
CYS 4920.0075
ASP 4930.0066
PRO 4940.0133
GLU 4950.0115
MET 4960.0111
VAL 4970.0243
SER 4980.0150
GLN 4990.0188
SER 5000.0234
THR 5010.0240
CYS 5020.0168
ARG 5030.0160
PHE 5040.0197
PHE 5050.0220
VAL 5060.0126
CYS 5070.0158
LYS 5080.0162
CYS 5090.0139
VAL 5100.0135
GLU 5110.0106
ARG 5120.0155
SER 20.0036
VAL 30.0038
LEU 40.0030
SER 50.0033
GLN 60.0065
SER 70.0106
PRO 80.0133
ALA 90.0104
ILE 100.0108
LEU 110.0149
SER 120.0096
ALA 130.0041
SER 140.0094
PRO 150.0119
GLY 160.0164
GLU 170.0083
LYS 180.0082
VAL 190.0139
THR 200.0140
MET 210.0115
THR 220.0092
CYS 230.0047
ARG 240.0030
ALA 250.0020
ARG 260.0025
SER 270.0054
SER 290.0061
VAL 300.0062
SER 310.0062
TYR 320.0063
MET 330.0054
HIS 340.0051
TRP 350.0023
TYR 360.0033
GLN 370.0026
GLN 380.0072
LYS 390.0075
SER 400.0134
GLY 410.0145
SER 420.0127
SER 430.0130
PRO 440.0092
LYS 450.0078
PRO 460.0102
TRP 470.0059
ILE 480.0068
HIS 490.0090
ALA 500.0065
THR 510.0053
SER 520.0038
ASN 530.0081
LEU 540.0050
ALA 550.0092
SER 560.0233
GLY 570.0216
VAL 580.0072
PRO 590.0068
ALA 600.0122
ARG 610.0159
PHE 620.0092
SER 630.0092
GLY 640.0082
SER 650.0053
GLY 660.0040
SER 670.0028
GLY 680.0049
THR 690.0036
SER 700.0029
TYR 710.0049
SER 720.0072
LEU 730.0086
THR 740.0156
ILE 750.0138
SER 760.0131
ARG 770.0131
VAL 780.0105
GLU 790.0129
ALA 800.0072
GLU 810.0107
ASP 820.0097
ALA 830.0061
ALA 840.0048
THR 850.0044
TYR 860.0026
TYR 870.0038
CYS 880.0052
GLN 890.0054
GLN 900.0046
TRP 910.0042
SER 920.0091
SER 930.0070
HIS 940.0061
PRO 950.0062
PRO 960.0036
THR 970.0048
PHE 980.0054
GLY 990.0064
SER 1000.0073
GLY 1010.0051
THR 1020.0069
LYS 1030.0076
LEU 1040.0085
GLU 1050.0071
ILE 1060.0032
LYS 1070.0065
ARG 1080.0061
ALA 1090.0091
ASP 1100.0083
ALA 1110.0054
ALA 1120.0067
PRO 1130.0072
THR 1140.0077
VAL 1150.0091
SER 1160.0067
ILE 1170.0068
PHE 1180.0053
PRO 1190.0065
PRO 1200.0061
SER 1210.0058
SER 1220.0090
GLU 1230.0056
GLN 1240.0043
LEU 1250.0033
THR 1260.0038
SER 1270.0072
GLY 1280.0091
GLY 1290.0097
ALA 1300.0072
SER 1310.0085
VAL 1320.0084
VAL 1330.0083
CYS 1340.0076
PHE 1350.0060
LEU 1360.0078
ASN 1370.0067
ASN 1380.0061
PHE 1390.0062
TYR 1400.0078
PRO 1410.0095
LYS 1420.0110
ASP 1430.0113
ILE 1440.0089
ASN 1450.0097
VAL 1460.0061
LYS 1470.0061
TRP 1480.0057
LYS 1490.0059
ILE 1500.0099
ASP 1510.0164
GLY 1520.0235
SER 1530.0169
GLU 1540.0098
ARG 1550.0130
GLN 1560.0262
ASN 1570.0495
GLY 1580.0219
VAL 1590.0165
LEU 1600.0137
ASN 1610.0148
SER 1620.0130
TRP 1630.0120
THR 1640.0065
ASP 1650.0051
GLN 1660.0040
ASP 1670.0062
SER 1680.0041
LYS 1690.0035
ASP 1700.0049
SER 1710.0041
THR 1720.0059
TYR 1730.0059
SER 1740.0057
MET 1750.0073
SER 1760.0082
SER 1770.0093
THR 1780.0087
LEU 1790.0129
THR 1800.0116
LEU 1810.0099
THR 1820.0175
LYS 1830.0125
ASP 1840.0193
GLU 1850.0164
TYR 1860.0116
GLU 1870.0128
ARG 1880.0234
HIS 1890.0137
ASN 1900.0055
SER 1910.0049
TYR 1920.0062
THR 1930.0073
CYS 1940.0061
GLU 1950.0032
ALA 1960.0057
THR 1970.0095
HIS 1980.0095
LYS 1990.0095
THR 2000.0097
SER 2010.0098
THR 2020.0120
SER 2030.0091
PRO 2040.0080
ILE 2050.0069
VAL 2060.0045
LYS 2070.0055
SER 2080.0048
PHE 2090.0038
ASN 2100.0045
ARG 2110.0077
ASN 2120.0232
GLU 2130.0224
CYS 2140.0286
GLU 10.0286
VAL 20.0084
GLN 30.0225
LEU 40.0157
VAL 50.0133
GLU 60.0121
SER 70.0125
GLY 80.0154
GLY 90.0186
GLY 100.0176
LEU 110.0090
VAL 120.0094
LYS 130.0179
PRO 140.0181
GLY 150.0225
GLY 160.0136
SER 170.0141
LEU 180.0174
LYS 190.0070
LEU 200.0081
SER 210.0078
CYS 220.0102
ALA 230.0134
ALA 240.0158
SER 250.0183
GLY 260.0186
PHE 270.0180
ILE 280.0252
PHE 290.0205
SER 300.0189
ASP 310.0190
TYR 320.0161
TYR 330.0148
MET 340.0125
TYR 350.0107
TRP 360.0088
VAL 370.0104
ARG 380.0106
GLN 390.0129
THR 400.0181
PRO 410.0231
GLU 420.0329
LYS 430.0172
ARG 440.0146
LEU 450.0103
GLU 460.0076
TRP 470.0047
VAL 480.0064
ALA 490.0086
THR 500.0121
ILE 510.0141
SER 520.0172
ASP 520.0163
GLY 530.0154
ASN 540.0156
SER 550.0195
TYR 560.0166
THR 570.0166
TYR 580.0101
TYR 590.0079
VAL 600.0050
ASP 610.0233
SER 620.0198
VAL 630.0124
LYS 640.0151
GLY 650.0134
ARG 660.0086
PHE 670.0015
THR 680.0050
ILE 690.0082
SER 700.0273
ARG 710.0169
ASP 720.0233
ASN 730.0199
ALA 740.0499
LYS 750.0570
ASN 760.0209
ASN 770.0158
LEU 780.0109
TYR 790.0086
LEU 800.0090
GLN 810.0091
MET 820.0129
SER 820.0111
SER 820.0080
LEU 820.0055
LYS 830.0004
SER 840.0027
GLU 850.0138
ASP 860.0157
THR 870.0183
ALA 880.0162
ILE 890.0147
TYR 900.0133
TYR 910.0126
CYS 920.0130
ALA 930.0146
ARG 940.0154
ASP 950.0105
GLY 960.0137
PRO 970.0308
THR 980.0400
ASP 990.0452
SER 1000.0161
SER 1000.0104
GLY 1000.0062
TYR 1000.0082
GLY 1000.0050
GLY 1000.0056
PHE 1000.0067
GLY 1010.0119
TYR 1020.0154
TRP 1030.0123
GLY 1040.0127
GLN 1050.0113
GLY 1060.0147
THR 1070.0159
LEU 1080.0163
VAL 1090.0184
THR 1100.0131
VAL 1110.0082
SER 1120.0163
GLU 1130.0234
ALA 1140.0221
LYS 1150.0481
THR 1160.0326
THR 1170.0198
PRO 1180.0174
PRO 1190.0178
SER 1200.0202
VAL 1210.0073
TYR 1220.0034
PRO 1230.0032
LEU 1240.0043
ALA 1250.0083
PRO 1260.0116
GLY 1270.0164
SER 1280.0287
ALA 1290.0499
ALA 1300.0187
GLN 1330.0137
THR 1340.0190
ASN 1350.0141
SER 1360.0200
MET 1370.0236
VAL 1380.0219
THR 1390.0090
LEU 1400.0092
GLY 1410.0096
CYS 1420.0040
LEU 1430.0058
VAL 1440.0081
LYS 1450.0140
GLY 1460.0132
TYR 1470.0149
PHE 1480.0151
PRO 1490.0166
GLU 1500.0188
PRO 1510.0170
VAL 1520.0137
THR 1530.0120
VAL 1540.0043
THR 1560.0077
TRP 1570.0074
ASN 1620.0157
SER 1630.0237
GLY 1640.0206
SER 1650.0114
LEU 1660.0088
SER 1670.0239
SER 1680.0308
GLY 1690.0086
VAL 1710.0071
HIS 1720.0036
THR 1730.0041
PHE 1740.0090
PRO 1750.0173
ALA 1760.0198
VAL 1770.0220
LEU 1780.0179
GLN 1790.0149
SER 1800.0255
ASP 1830.0050
LEU 1840.0033
TYR 1850.0125
THR 1860.0122
LEU 1870.0095
SER 1880.0054
SER 1890.0069
SER 1900.0066
VAL 1910.0066
THR 1920.0184
VAL 1930.0186
PRO 1940.0210
SER 1950.0333
SER 1960.0329
PRO 1980.0254
ARG 1990.0270
PRO 2000.0238
SER 2020.0283
GLU 2030.0150
THR 2040.0116
VAL 2050.0135
THR 2060.0166
CYS 2080.0109
ASN 2090.0088
VAL 2100.0079
ALA 2110.0237
HIS 2120.0197
PRO 2130.0205
ALA 2140.0308
SER 2150.0205
SER 2160.0276
THR 2170.0310
LYS 2180.0380
VAL 2190.0312
ASP 2200.0096
LYS 2210.0059
LYS 2220.0093
ILE 2230.0172
VAL 2260.0331
PRO 2270.0288
ARG 2280.0162
ASP 2320.0106
CYS 2330.0249

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.