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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0410
ILE 4790.0283
PHE 4800.0253
ILE 4810.0271
SER 4820.0295
ASP 4830.0313
ASP 4840.0289
LYS 4850.0241
ASP 4860.0224
SER 4870.0253
LEU 4880.0226
LYS 4890.0190
CYS 4900.0163
PRO 4910.0118
CYS 4920.0104
ASP 4930.0132
PRO 4940.0170
GLU 4950.0185
MET 4960.0228
VAL 4970.0260
SER 4980.0303
GLN 4990.0341
SER 5000.0393
THR 5010.0410
CYS 5020.0371
ARG 5030.0322
PHE 5040.0299
PHE 5050.0249
VAL 5060.0223
CYS 5070.0187
LYS 5080.0158
CYS 5090.0137
VAL 5100.0167
GLU 5110.0170
ARG 5120.0206
SER 20.0134
VAL 30.0131
LEU 40.0112
SER 50.0123
GLN 60.0105
SER 70.0119
PRO 80.0121
ALA 90.0131
ILE 100.0143
LEU 110.0130
SER 120.0146
ALA 130.0145
SER 140.0162
PRO 150.0159
GLY 160.0154
GLU 170.0135
LYS 180.0105
VAL 190.0099
THR 200.0077
MET 210.0081
THR 220.0080
CYS 230.0085
ARG 240.0118
ALA 250.0129
ARG 260.0169
SER 270.0172
SER 290.0161
VAL 300.0129
SER 310.0125
TYR 320.0089
MET 330.0052
HIS 340.0019
TRP 350.0022
TYR 360.0052
GLN 370.0084
GLN 380.0114
LYS 390.0140
SER 400.0159
GLY 410.0181
SER 420.0155
SER 430.0124
PRO 440.0093
LYS 450.0096
PRO 460.0072
TRP 470.0066
ILE 480.0043
HIS 490.0060
ALA 500.0072
THR 510.0052
SER 520.0053
ASN 530.0076
LEU 540.0083
ALA 550.0100
SER 560.0137
GLY 570.0148
VAL 580.0115
PRO 590.0108
ALA 600.0091
ARG 610.0087
PHE 620.0066
SER 630.0030
GLY 640.0007
SER 650.0044
GLY 660.0078
SER 670.0112
GLY 680.0141
THR 690.0134
SER 700.0108
TYR 710.0070
SER 720.0048
LEU 730.0033
THR 740.0054
ILE 750.0079
SER 760.0085
ARG 770.0119
VAL 780.0126
GLU 790.0144
ALA 800.0153
GLU 810.0144
ASP 820.0130
ALA 830.0142
ALA 840.0129
THR 850.0114
TYR 860.0084
TYR 870.0063
CYS 880.0043
GLN 890.0034
GLN 900.0063
TRP 910.0082
SER 920.0122
SER 930.0135
HIS 940.0119
PRO 950.0097
PRO 960.0069
THR 970.0073
PHE 980.0064
GLY 990.0089
SER 1000.0115
GLY 1010.0093
THR 1020.0105
LYS 1030.0125
LEU 1040.0130
GLU 1050.0146
ILE 1060.0157
LYS 1070.0160
ARG 1080.0157
ALA 1090.0155
ASP 1100.0125
ALA 1110.0097
ALA 1120.0061
PRO 1130.0036
THR 1140.0040
VAL 1150.0030
SER 1160.0074
ILE 1170.0088
PHE 1180.0108
PRO 1190.0138
PRO 1200.0121
SER 1210.0144
SER 1220.0185
GLU 1230.0154
GLN 1240.0110
LEU 1250.0151
THR 1260.0166
SER 1270.0118
GLY 1280.0132
GLY 1290.0100
ALA 1300.0119
SER 1310.0081
VAL 1320.0084
VAL 1330.0045
CYS 1340.0032
PHE 1350.0023
LEU 1360.0030
ASN 1370.0069
ASN 1380.0096
PHE 1390.0094
TYR 1400.0123
PRO 1410.0135
LYS 1420.0133
ASP 1430.0144
ILE 1440.0112
ASN 1450.0125
VAL 1460.0114
LYS 1470.0149
TRP 1480.0153
LYS 1490.0196
ILE 1500.0224
ASP 1510.0267
GLY 1520.0289
SER 1530.0254
GLU 1540.0268
ARG 1550.0234
GLN 1560.0214
ASN 1570.0201
GLY 1580.0160
VAL 1590.0126
LEU 1600.0106
ASN 1610.0101
SER 1620.0109
TRP 1630.0130
THR 1640.0145
ASP 1650.0156
GLN 1660.0154
ASP 1670.0145
SER 1680.0142
LYS 1690.0141
ASP 1700.0144
SER 1710.0149
THR 1720.0134
TYR 1730.0123
SER 1740.0096
MET 1750.0080
SER 1760.0051
SER 1770.0052
THR 1780.0053
LEU 1790.0098
THR 1800.0106
LEU 1810.0151
THR 1820.0169
LYS 1830.0182
ASP 1840.0236
GLU 1850.0234
TYR 1860.0206
GLU 1870.0251
ARG 1880.0290
HIS 1890.0279
ASN 1900.0279
SER 1910.0243
TYR 1920.0187
THR 1930.0159
CYS 1940.0110
GLU 1950.0119
ALA 1960.0088
THR 1970.0108
HIS 1980.0093
LYS 1990.0112
THR 2000.0073
SER 2010.0063
THR 2020.0108
SER 2030.0126
PRO 2040.0120
ILE 2050.0078
VAL 2060.0111
LYS 2070.0116
SER 2080.0157
PHE 2090.0199
ASN 2100.0244
ARG 2110.0247
ASN 2120.0294
GLU 2130.0282
CYS 2140.0279
GLU 10.0240
VAL 20.0204
GLN 30.0196
LEU 40.0162
VAL 50.0179
GLU 60.0154
SER 70.0167
GLY 80.0171
GLY 90.0165
GLY 100.0186
LEU 110.0194
VAL 120.0192
LYS 130.0195
PRO 140.0182
GLY 150.0163
GLY 160.0158
SER 170.0133
LEU 180.0130
LYS 190.0114
LEU 200.0120
SER 210.0131
CYS 220.0141
ALA 230.0179
ALA 240.0182
SER 250.0224
GLY 260.0239
PHE 270.0226
ILE 280.0231
PHE 290.0193
SER 300.0195
ASP 310.0202
TYR 320.0159
TYR 330.0119
MET 340.0089
TYR 350.0049
TRP 360.0043
VAL 370.0049
ARG 380.0086
GLN 390.0115
THR 400.0146
PRO 410.0181
GLU 420.0181
LYS 430.0147
ARG 440.0125
LEU 450.0086
GLU 460.0073
TRP 470.0035
VAL 480.0036
ALA 490.0013
THR 500.0048
ILE 510.0078
SER 520.0121
ASP 520.0159
GLY 530.0195
ASN 540.0179
SER 550.0135
TYR 560.0120
THR 570.0077
TYR 580.0069
TYR 590.0053
VAL 600.0074
ASP 610.0108
SER 620.0119
VAL 630.0086
LYS 640.0073
GLY 650.0059
ARG 660.0067
PHE 670.0044
THR 680.0017
ILE 690.0038
SER 700.0075
ARG 710.0119
ASP 720.0155
ASN 730.0186
ALA 740.0217
LYS 750.0212
ASN 760.0194
ASN 770.0159
LEU 780.0116
TYR 790.0093
LEU 800.0068
GLN 810.0067
MET 820.0085
SER 820.0097
SER 820.0123
LEU 820.0138
LYS 830.0160
SER 840.0181
GLU 850.0168
ASP 860.0139
THR 870.0164
ALA 880.0149
ILE 890.0139
TYR 900.0110
TYR 910.0096
CYS 920.0089
ALA 930.0084
ARG 940.0099
ASP 950.0108
GLY 960.0128
PRO 970.0173
THR 980.0198
ASP 990.0186
SER 1000.0140
SER 1000.0133
GLY 1000.0137
TYR 1000.0108
GLY 1000.0078
GLY 1000.0056
PHE 1000.0059
GLY 1010.0097
TYR 1020.0118
TRP 1030.0108
GLY 1040.0134
GLN 1050.0160
GLY 1060.0139
THR 1070.0156
LEU 1080.0177
VAL 1090.0165
THR 1100.0187
VAL 1110.0188
SER 1120.0196
GLU 1130.0202
ALA 1140.0196
LYS 1150.0180
THR 1160.0175
THR 1170.0149
PRO 1180.0138
PRO 1190.0109
SER 1200.0082
VAL 1210.0108
TYR 1220.0106
PRO 1230.0137
LEU 1240.0120
ALA 1250.0164
PRO 1260.0175
GLY 1270.0201
SER 1280.0240
ALA 1290.0236
ALA 1300.0191
GLN 1330.0234
THR 1340.0245
ASN 1350.0199
SER 1360.0241
MET 1370.0214
VAL 1380.0185
THR 1390.0143
LEU 1400.0144
GLY 1410.0116
CYS 1420.0114
LEU 1430.0067
VAL 1440.0085
LYS 1450.0055
GLY 1460.0068
TYR 1470.0118
PHE 1480.0162
PRO 1490.0183
GLU 1500.0187
PRO 1510.0203
VAL 1520.0178
THR 1530.0194
VAL 1540.0187
THR 1560.0226
TRP 1570.0233
ASN 1620.0282
SER 1630.0297
GLY 1640.0306
SER 1650.0328
LEU 1660.0278
SER 1670.0262
SER 1680.0253
GLY 1690.0197
VAL 1710.0174
HIS 1720.0137
THR 1730.0145
PHE 1740.0121
PRO 1750.0152
ALA 1760.0142
VAL 1770.0136
LEU 1780.0153
GLN 1790.0134
SER 1800.0137
ASP 1830.0148
LEU 1840.0126
TYR 1850.0124
THR 1860.0086
LEU 1870.0095
SER 1880.0078
SER 1890.0110
SER 1900.0113
VAL 1910.0159
THR 1920.0174
VAL 1930.0227
PRO 1940.0259
SER 1950.0270
SER 1960.0325
PRO 1980.0315
ARG 1990.0290
PRO 2000.0303
SER 2020.0354
GLU 2030.0342
THR 2040.0306
VAL 2050.0256
THR 2060.0237
CYS 2080.0199
ASN 2090.0215
VAL 2100.0185
ALA 2110.0203
HIS 2120.0189
PRO 2130.0228
ALA 2140.0213
SER 2150.0188
SER 2160.0212
THR 2170.0186
LYS 2180.0215
VAL 2190.0196
ASP 2200.0219
LYS 2210.0192
LYS 2220.0229
ILE 2230.0211
VAL 2260.0249
PRO 2270.0258
ARG 2280.0248
ASP 2320.0290
CYS 2330.0303

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.