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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 70  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0762
ILE 4790.0167
PHE 4800.0143
ILE 4810.0039
SER 4820.0031
ASP 4830.0058
ASP 4840.0069
LYS 4850.0009
ASP 4860.0020
SER 4870.0029
LEU 4880.0005
LYS 4890.0013
CYS 4900.0020
PRO 4910.0034
CYS 4920.0027
ASP 4930.0020
PRO 4940.0025
GLU 4950.0045
MET 4960.0066
VAL 4970.0104
SER 4980.0054
GLN 4990.0048
SER 5000.0133
THR 5010.0074
CYS 5020.0035
ARG 5030.0056
PHE 5040.0062
PHE 5050.0070
VAL 5060.0039
CYS 5070.0014
LYS 5080.0022
CYS 5090.0029
VAL 5100.0062
GLU 5110.0089
ARG 5120.0270
SER 20.0083
VAL 30.0089
LEU 40.0074
SER 50.0073
GLN 60.0059
SER 70.0061
PRO 80.0024
ALA 90.0073
ILE 100.0099
LEU 110.0078
SER 120.0091
ALA 130.0081
SER 140.0119
PRO 150.0133
GLY 160.0162
GLU 170.0167
LYS 180.0152
VAL 190.0135
THR 200.0080
MET 210.0052
THR 220.0084
CYS 230.0081
ARG 240.0073
ALA 250.0043
ARG 260.0074
SER 270.0077
SER 290.0040
VAL 300.0018
SER 310.0011
TYR 320.0031
MET 330.0036
HIS 340.0034
TRP 350.0022
TYR 360.0032
GLN 370.0036
GLN 380.0075
LYS 390.0092
SER 400.0109
GLY 410.0137
SER 420.0104
SER 430.0078
PRO 440.0061
LYS 450.0061
PRO 460.0062
TRP 470.0051
ILE 480.0031
HIS 490.0024
ALA 500.0047
THR 510.0045
SER 520.0044
ASN 530.0020
LEU 540.0041
ALA 550.0055
SER 560.0198
GLY 570.0168
VAL 580.0101
PRO 590.0105
ALA 600.0122
ARG 610.0090
PHE 620.0090
SER 630.0097
GLY 640.0088
SER 650.0070
GLY 660.0054
SER 670.0049
GLY 680.0041
THR 690.0034
SER 700.0066
TYR 710.0064
SER 720.0066
LEU 730.0064
THR 740.0132
ILE 750.0097
SER 760.0137
ARG 770.0135
VAL 780.0055
GLU 790.0116
ALA 800.0119
GLU 810.0129
ASP 820.0093
ALA 830.0085
ALA 840.0082
THR 850.0075
TYR 860.0020
TYR 870.0021
CYS 880.0024
GLN 890.0033
GLN 900.0027
TRP 910.0029
SER 920.0011
SER 930.0021
HIS 940.0048
PRO 950.0070
PRO 960.0070
THR 970.0065
PHE 980.0032
GLY 990.0031
SER 1000.0033
GLY 1010.0058
THR 1020.0040
LYS 1030.0063
LEU 1040.0088
GLU 1050.0090
ILE 1060.0087
LYS 1070.0091
ARG 1080.0112
ALA 1090.0162
ASP 1100.0162
ALA 1110.0178
ALA 1120.0151
PRO 1130.0140
THR 1140.0164
VAL 1150.0173
SER 1160.0059
ILE 1170.0066
PHE 1180.0074
PRO 1190.0053
PRO 1200.0035
SER 1210.0039
SER 1220.0037
GLU 1230.0033
GLN 1240.0055
LEU 1250.0056
THR 1260.0117
SER 1270.0145
GLY 1280.0069
GLY 1290.0084
ALA 1300.0079
SER 1310.0083
VAL 1320.0065
VAL 1330.0051
CYS 1340.0104
PHE 1350.0099
LEU 1360.0113
ASN 1370.0166
ASN 1380.0163
PHE 1390.0153
TYR 1400.0116
PRO 1410.0101
LYS 1420.0090
ASP 1430.0113
ILE 1440.0106
ASN 1450.0130
VAL 1460.0045
LYS 1470.0072
TRP 1480.0086
LYS 1490.0117
ILE 1500.0170
ASP 1510.0179
GLY 1520.0176
SER 1530.0075
GLU 1540.0169
ARG 1550.0181
GLN 1560.0218
ASN 1570.0236
GLY 1580.0209
VAL 1590.0201
LEU 1600.0167
ASN 1610.0133
SER 1620.0097
TRP 1630.0071
THR 1640.0055
ASP 1650.0066
GLN 1660.0066
ASP 1670.0075
SER 1680.0096
LYS 1690.0154
ASP 1700.0160
SER 1710.0131
THR 1720.0140
TYR 1730.0110
SER 1740.0118
MET 1750.0120
SER 1760.0068
SER 1770.0091
THR 1780.0104
LEU 1790.0147
THR 1800.0129
LEU 1810.0121
THR 1820.0124
LYS 1830.0089
ASP 1840.0190
GLU 1850.0173
TYR 1860.0097
GLU 1870.0102
ARG 1880.0186
HIS 1890.0115
ASN 1900.0069
SER 1910.0122
TYR 1920.0118
THR 1930.0118
CYS 1940.0123
GLU 1950.0129
ALA 1960.0138
THR 1970.0139
HIS 1980.0054
LYS 1990.0047
THR 2000.0163
SER 2010.0230
THR 2020.0486
SER 2030.0383
PRO 2040.0304
ILE 2050.0280
VAL 2060.0161
LYS 2070.0160
SER 2080.0165
PHE 2090.0112
ASN 2100.0080
ARG 2110.0042
ASN 2120.0087
GLU 2130.0124
CYS 2140.0209
GLU 10.0064
VAL 20.0066
GLN 30.0085
LEU 40.0070
VAL 50.0064
GLU 60.0065
SER 70.0088
GLY 80.0122
GLY 90.0106
GLY 100.0197
LEU 110.0187
VAL 120.0154
LYS 130.0098
PRO 140.0082
GLY 150.0095
GLY 160.0066
SER 170.0035
LEU 180.0050
LYS 190.0036
LEU 200.0035
SER 210.0059
CYS 220.0070
ALA 230.0032
ALA 240.0011
SER 250.0053
GLY 260.0075
PHE 270.0073
ILE 280.0118
PHE 290.0080
SER 300.0081
ASP 310.0095
TYR 320.0072
TYR 330.0054
MET 340.0049
TYR 350.0049
TRP 360.0053
VAL 370.0040
ARG 380.0043
GLN 390.0054
THR 400.0092
PRO 410.0151
GLU 420.0169
LYS 430.0145
ARG 440.0127
LEU 450.0090
GLU 460.0077
TRP 470.0088
VAL 480.0072
ALA 490.0066
THR 500.0050
ILE 510.0042
SER 520.0055
ASP 520.0095
GLY 530.0152
ASN 540.0161
SER 550.0100
TYR 560.0095
THR 570.0077
TYR 580.0088
TYR 590.0123
VAL 600.0170
ASP 610.0415
SER 620.0271
VAL 630.0105
LYS 640.0221
GLY 650.0292
ARG 660.0207
PHE 670.0074
THR 680.0065
ILE 690.0064
SER 700.0174
ARG 710.0117
ASP 720.0156
ASN 730.0114
ALA 740.0291
LYS 750.0310
ASN 760.0087
ASN 770.0079
LEU 780.0079
TYR 790.0079
LEU 800.0077
GLN 810.0083
MET 820.0080
SER 820.0135
SER 820.0191
LEU 820.0179
LYS 830.0236
SER 840.0260
GLU 850.0226
ASP 860.0145
THR 870.0174
ALA 880.0080
ILE 890.0075
TYR 900.0071
TYR 910.0060
CYS 920.0060
ALA 930.0060
ARG 940.0054
ASP 950.0044
GLY 960.0053
PRO 970.0086
THR 980.0063
ASP 990.0079
SER 1000.0035
SER 1000.0018
GLY 1000.0011
TYR 1000.0017
GLY 1000.0015
GLY 1000.0014
PHE 1000.0025
GLY 1010.0038
TYR 1020.0053
TRP 1030.0066
GLY 1040.0074
GLN 1050.0073
GLY 1060.0053
THR 1070.0089
LEU 1080.0105
VAL 1090.0143
THR 1100.0183
VAL 1110.0138
SER 1120.0131
GLU 1130.0044
ALA 1140.0099
LYS 1150.0146
THR 1160.0173
THR 1170.0090
PRO 1180.0097
PRO 1190.0105
SER 1200.0097
VAL 1210.0029
TYR 1220.0027
PRO 1230.0031
LEU 1240.0059
ALA 1250.0052
PRO 1260.0056
GLY 1270.0133
SER 1280.0152
ALA 1290.0332
ALA 1300.0176
GLN 1330.0322
THR 1340.0217
ASN 1350.0443
SER 1360.0210
MET 1370.0109
VAL 1380.0285
THR 1390.0097
LEU 1400.0095
GLY 1410.0103
CYS 1420.0086
LEU 1430.0086
VAL 1440.0087
LYS 1450.0148
GLY 1460.0143
TYR 1470.0148
PHE 1480.0125
PRO 1490.0162
GLU 1500.0194
PRO 1510.0174
VAL 1520.0162
THR 1530.0189
VAL 1540.0138
THR 1560.0167
TRP 1570.0097
ASN 1620.0259
SER 1630.0350
GLY 1640.0326
SER 1650.0396
LEU 1660.0203
SER 1670.0157
SER 1680.0565
GLY 1690.0407
VAL 1710.0147
HIS 1720.0116
THR 1730.0060
PHE 1740.0062
PRO 1750.0124
ALA 1760.0211
VAL 1770.0415
LEU 1780.0385
GLN 1790.0435
SER 1800.0762
ASP 1830.0150
LEU 1840.0192
TYR 1850.0261
THR 1860.0226
LEU 1870.0141
SER 1880.0122
SER 1890.0079
SER 1900.0116
VAL 1910.0157
THR 1920.0290
VAL 1930.0178
PRO 1940.0132
SER 1950.0304
SER 1960.0413
PRO 1980.0396
ARG 1990.0344
PRO 2000.0346
SER 2020.0340
GLU 2030.0464
THR 2040.0374
VAL 2050.0217
THR 2060.0127
CYS 2080.0067
ASN 2090.0138
VAL 2100.0184
ALA 2110.0208
HIS 2120.0151
PRO 2130.0099
ALA 2140.0133
SER 2150.0041
SER 2160.0070
THR 2170.0166
LYS 2180.0251
VAL 2190.0172
ASP 2200.0107
LYS 2210.0118
LYS 2220.0138
ILE 2230.0190
VAL 2260.0406
PRO 2270.0357
ARG 2280.0252
ASP 2320.0417
CYS 2330.0163

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.