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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 71  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0673
ILE 4790.0106
PHE 4800.0069
ILE 4810.0036
SER 4820.0068
ASP 4830.0072
ASP 4840.0086
LYS 4850.0052
ASP 4860.0095
SER 4870.0079
LEU 4880.0035
LYS 4890.0044
CYS 4900.0042
PRO 4910.0015
CYS 4920.0029
ASP 4930.0033
PRO 4940.0057
GLU 4950.0065
MET 4960.0072
VAL 4970.0123
SER 4980.0087
GLN 4990.0075
SER 5000.0130
THR 5010.0154
CYS 5020.0175
ARG 5030.0135
PHE 5040.0098
PHE 5050.0083
VAL 5060.0044
CYS 5070.0047
LYS 5080.0057
CYS 5090.0037
VAL 5100.0038
GLU 5110.0044
ARG 5120.0127
SER 20.0114
VAL 30.0120
LEU 40.0111
SER 50.0119
GLN 60.0099
SER 70.0120
PRO 80.0075
ALA 90.0057
ILE 100.0014
LEU 110.0038
SER 120.0066
ALA 130.0073
SER 140.0094
PRO 150.0071
GLY 160.0067
GLU 170.0098
LYS 180.0083
VAL 190.0058
THR 200.0038
MET 210.0042
THR 220.0065
CYS 230.0094
ARG 240.0106
ALA 250.0078
ARG 260.0106
SER 270.0070
SER 290.0043
VAL 300.0033
SER 310.0029
TYR 320.0022
MET 330.0011
HIS 340.0018
TRP 350.0020
TYR 360.0029
GLN 370.0021
GLN 380.0040
LYS 390.0067
SER 400.0106
GLY 410.0138
SER 420.0080
SER 430.0044
PRO 440.0033
LYS 450.0037
PRO 460.0042
TRP 470.0033
ILE 480.0041
HIS 490.0048
ALA 500.0056
THR 510.0042
SER 520.0061
ASN 530.0081
LEU 540.0068
ALA 550.0051
SER 560.0078
GLY 570.0071
VAL 580.0083
PRO 590.0107
ALA 600.0116
ARG 610.0086
PHE 620.0054
SER 630.0050
GLY 640.0062
SER 650.0075
GLY 660.0093
SER 670.0092
GLY 680.0049
THR 690.0050
SER 700.0098
TYR 710.0059
SER 720.0053
LEU 730.0030
THR 740.0043
ILE 750.0042
SER 760.0065
ARG 770.0068
VAL 780.0050
GLU 790.0060
ALA 800.0059
GLU 810.0062
ASP 820.0048
ALA 830.0058
ALA 840.0047
THR 850.0040
TYR 860.0030
TYR 870.0040
CYS 880.0041
GLN 890.0046
GLN 900.0046
TRP 910.0042
SER 920.0044
SER 930.0045
HIS 940.0042
PRO 950.0070
PRO 960.0072
THR 970.0068
PHE 980.0085
GLY 990.0084
SER 1000.0086
GLY 1010.0046
THR 1020.0025
LYS 1030.0018
LEU 1040.0045
GLU 1050.0054
ILE 1060.0060
LYS 1070.0059
ARG 1080.0026
ALA 1090.0029
ASP 1100.0069
ALA 1110.0071
ALA 1120.0063
PRO 1130.0084
THR 1140.0099
VAL 1150.0098
SER 1160.0086
ILE 1170.0100
PHE 1180.0113
PRO 1190.0162
PRO 1200.0146
SER 1210.0154
SER 1220.0226
GLU 1230.0188
GLN 1240.0161
LEU 1250.0186
THR 1260.0232
SER 1270.0291
GLY 1280.0195
GLY 1290.0159
ALA 1300.0093
SER 1310.0088
VAL 1320.0097
VAL 1330.0106
CYS 1340.0084
PHE 1350.0067
LEU 1360.0062
ASN 1370.0042
ASN 1380.0040
PHE 1390.0038
TYR 1400.0016
PRO 1410.0013
LYS 1420.0018
ASP 1430.0064
ILE 1440.0065
ASN 1450.0096
VAL 1460.0047
LYS 1470.0045
TRP 1480.0072
LYS 1490.0116
ILE 1500.0076
ASP 1510.0144
GLY 1520.0302
SER 1530.0281
GLU 1540.0190
ARG 1550.0228
GLN 1560.0327
ASN 1570.0653
GLY 1580.0167
VAL 1590.0143
LEU 1600.0201
ASN 1610.0121
SER 1620.0087
TRP 1630.0044
THR 1640.0033
ASP 1650.0046
GLN 1660.0040
ASP 1670.0057
SER 1680.0048
LYS 1690.0033
ASP 1700.0015
SER 1710.0024
THR 1720.0019
TYR 1730.0027
SER 1740.0031
MET 1750.0044
SER 1760.0089
SER 1770.0103
THR 1780.0116
LEU 1790.0058
THR 1800.0052
LEU 1810.0036
THR 1820.0027
LYS 1830.0083
ASP 1840.0093
GLU 1850.0051
TYR 1860.0019
GLU 1870.0065
ARG 1880.0049
HIS 1890.0037
ASN 1900.0041
SER 1910.0059
TYR 1920.0053
THR 1930.0095
CYS 1940.0084
GLU 1950.0102
ALA 1960.0136
THR 1970.0189
HIS 1980.0099
LYS 1990.0046
THR 2000.0143
SER 2010.0141
THR 2020.0396
SER 2030.0455
PRO 2040.0337
ILE 2050.0281
VAL 2060.0153
LYS 2070.0131
SER 2080.0106
PHE 2090.0079
ASN 2100.0050
ARG 2110.0015
ASN 2120.0156
GLU 2130.0165
CYS 2140.0142
GLU 10.0093
VAL 20.0081
GLN 30.0053
LEU 40.0026
VAL 50.0030
GLU 60.0037
SER 70.0073
GLY 80.0102
GLY 90.0110
GLY 100.0154
LEU 110.0129
VAL 120.0096
LYS 130.0137
PRO 140.0115
GLY 150.0235
GLY 160.0088
SER 170.0059
LEU 180.0100
LYS 190.0080
LEU 200.0069
SER 210.0060
CYS 220.0044
ALA 230.0021
ALA 240.0026
SER 250.0028
GLY 260.0051
PHE 270.0090
ILE 280.0110
PHE 290.0101
SER 300.0115
ASP 310.0086
TYR 320.0086
TYR 330.0087
MET 340.0040
TYR 350.0045
TRP 360.0044
VAL 370.0042
ARG 380.0045
GLN 390.0050
THR 400.0102
PRO 410.0137
GLU 420.0165
LYS 430.0135
ARG 440.0143
LEU 450.0122
GLU 460.0038
TRP 470.0056
VAL 480.0048
ALA 490.0071
THR 500.0071
ILE 510.0070
SER 520.0120
ASP 520.0117
GLY 530.0128
ASN 540.0140
SER 550.0096
TYR 560.0115
THR 570.0119
TYR 580.0068
TYR 590.0087
VAL 600.0124
ASP 610.0317
SER 620.0207
VAL 630.0098
LYS 640.0168
GLY 650.0200
ARG 660.0128
PHE 670.0080
THR 680.0087
ILE 690.0066
SER 700.0096
ARG 710.0078
ASP 720.0057
ASN 730.0108
ALA 740.0101
LYS 750.0056
ASN 760.0045
ASN 770.0040
LEU 780.0062
TYR 790.0068
LEU 800.0076
GLN 810.0076
MET 820.0056
SER 820.0081
SER 820.0121
LEU 820.0099
LYS 830.0153
SER 840.0165
GLU 850.0168
ASP 860.0111
THR 870.0115
ALA 880.0073
ILE 890.0070
TYR 900.0066
TYR 910.0039
CYS 920.0029
ALA 930.0014
ARG 940.0046
ASP 950.0040
GLY 960.0047
PRO 970.0052
THR 980.0072
ASP 990.0074
SER 1000.0046
SER 1000.0042
GLY 1000.0045
TYR 1000.0034
GLY 1000.0032
GLY 1000.0023
PHE 1000.0022
GLY 1010.0026
TYR 1020.0025
TRP 1030.0036
GLY 1040.0045
GLN 1050.0049
GLY 1060.0060
THR 1070.0075
LEU 1080.0086
VAL 1090.0112
THR 1100.0113
VAL 1110.0077
SER 1120.0127
GLU 1130.0160
ALA 1140.0183
LYS 1150.0257
THR 1160.0102
THR 1170.0128
PRO 1180.0170
PRO 1190.0136
SER 1200.0143
VAL 1210.0092
TYR 1220.0079
PRO 1230.0091
LEU 1240.0117
ALA 1250.0213
PRO 1260.0283
GLY 1270.0272
SER 1280.0309
ALA 1290.0558
ALA 1300.0426
GLN 1330.0308
THR 1340.0372
ASN 1350.0417
SER 1360.0214
MET 1370.0186
VAL 1380.0203
THR 1390.0057
LEU 1400.0038
GLY 1410.0031
CYS 1420.0034
LEU 1430.0036
VAL 1440.0046
LYS 1450.0077
GLY 1460.0100
TYR 1470.0088
PHE 1480.0086
PRO 1490.0098
GLU 1500.0103
PRO 1510.0124
VAL 1520.0078
THR 1530.0192
VAL 1540.0190
THR 1560.0203
TRP 1570.0126
ASN 1620.0302
SER 1630.0450
GLY 1640.0547
SER 1650.0442
LEU 1660.0125
SER 1670.0412
SER 1680.0673
GLY 1690.0453
VAL 1710.0111
HIS 1720.0041
THR 1730.0025
PHE 1740.0045
PRO 1750.0080
ALA 1760.0102
VAL 1770.0150
LEU 1780.0134
GLN 1790.0124
SER 1800.0437
ASP 1830.0187
LEU 1840.0162
TYR 1850.0141
THR 1860.0076
LEU 1870.0039
SER 1880.0014
SER 1890.0032
SER 1900.0054
VAL 1910.0098
THR 1920.0218
VAL 1930.0065
PRO 1940.0028
SER 1950.0203
SER 1960.0492
PRO 1980.0413
ARG 1990.0270
PRO 2000.0179
SER 2020.0399
GLU 2030.0519
THR 2040.0215
VAL 2050.0196
THR 2060.0131
CYS 2080.0160
ASN 2090.0221
VAL 2100.0265
ALA 2110.0246
HIS 2120.0134
PRO 2130.0179
ALA 2140.0243
SER 2150.0299
SER 2160.0384
THR 2170.0205
LYS 2180.0341
VAL 2190.0322
ASP 2200.0223
LYS 2210.0094
LYS 2220.0062
ILE 2230.0145
VAL 2260.0465
PRO 2270.0507
ARG 2280.0422
ASP 2320.0534
CYS 2330.0251

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.