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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 73  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0556
ILE 4790.0423
PHE 4800.0416
ILE 4810.0244
SER 4820.0425
ASP 4830.0446
ASP 4840.0545
LYS 4850.0213
ASP 4860.0375
SER 4870.0315
LEU 4880.0151
LYS 4890.0240
CYS 4900.0250
PRO 4910.0172
CYS 4920.0140
ASP 4930.0101
PRO 4940.0186
GLU 4950.0236
MET 4960.0293
VAL 4970.0464
SER 4980.0189
GLN 4990.0278
SER 5000.0556
THR 5010.0325
CYS 5020.0473
ARG 5030.0285
PHE 5040.0338
PHE 5050.0264
VAL 5060.0215
CYS 5070.0215
LYS 5080.0222
CYS 5090.0236
VAL 5100.0208
GLU 5110.0223
ARG 5120.0475
SER 20.0223
VAL 30.0248
LEU 40.0207
SER 50.0060
GLN 60.0075
SER 70.0094
PRO 80.0161
ALA 90.0146
ILE 100.0167
LEU 110.0127
SER 120.0066
ALA 130.0079
SER 140.0146
PRO 150.0199
GLY 160.0242
GLU 170.0150
LYS 180.0147
VAL 190.0115
THR 200.0082
MET 210.0071
THR 220.0059
CYS 230.0128
ARG 240.0112
ALA 250.0119
ARG 260.0234
SER 270.0213
SER 290.0159
VAL 300.0140
SER 310.0109
TYR 320.0064
MET 330.0083
HIS 340.0085
TRP 350.0062
TYR 360.0055
GLN 370.0050
GLN 380.0041
LYS 390.0012
SER 400.0054
GLY 410.0215
SER 420.0134
SER 430.0078
PRO 440.0078
LYS 450.0073
PRO 460.0070
TRP 470.0051
ILE 480.0058
HIS 490.0063
ALA 500.0068
THR 510.0082
SER 520.0095
ASN 530.0084
LEU 540.0071
ALA 550.0076
SER 560.0120
GLY 570.0119
VAL 580.0090
PRO 590.0125
ALA 600.0117
ARG 610.0149
PHE 620.0089
SER 630.0079
GLY 640.0090
SER 650.0095
GLY 660.0106
SER 670.0118
GLY 680.0084
THR 690.0106
SER 700.0119
TYR 710.0078
SER 720.0041
LEU 730.0034
THR 740.0128
ILE 750.0136
SER 760.0149
ARG 770.0259
VAL 780.0187
GLU 790.0184
ALA 800.0086
GLU 810.0106
ASP 820.0105
ALA 830.0077
ALA 840.0065
THR 850.0064
TYR 860.0048
TYR 870.0044
CYS 880.0052
GLN 890.0112
GLN 900.0104
TRP 910.0097
SER 920.0156
SER 930.0142
HIS 940.0128
PRO 950.0140
PRO 960.0129
THR 970.0165
PHE 980.0098
GLY 990.0098
SER 1000.0069
GLY 1010.0033
THR 1020.0083
LYS 1030.0106
LEU 1040.0116
GLU 1050.0083
ILE 1060.0070
LYS 1070.0053
ARG 1080.0058
ALA 1090.0056
ASP 1100.0067
ALA 1110.0066
ALA 1120.0056
PRO 1130.0032
THR 1140.0033
VAL 1150.0039
SER 1160.0025
ILE 1170.0026
PHE 1180.0027
PRO 1190.0030
PRO 1200.0020
SER 1210.0027
SER 1220.0038
GLU 1230.0031
GLN 1240.0028
LEU 1250.0030
THR 1260.0047
SER 1270.0068
GLY 1280.0029
GLY 1290.0026
ALA 1300.0022
SER 1310.0012
VAL 1320.0018
VAL 1330.0023
CYS 1340.0032
PHE 1350.0023
LEU 1360.0026
ASN 1370.0029
ASN 1380.0027
PHE 1390.0032
TYR 1400.0029
PRO 1410.0040
LYS 1420.0058
ASP 1430.0045
ILE 1440.0033
ASN 1450.0027
VAL 1460.0018
LYS 1470.0015
TRP 1480.0019
LYS 1490.0027
ILE 1500.0018
ASP 1510.0025
GLY 1520.0067
SER 1530.0078
GLU 1540.0077
ARG 1550.0056
GLN 1560.0097
ASN 1570.0198
GLY 1580.0033
VAL 1590.0029
LEU 1600.0073
ASN 1610.0055
SER 1620.0043
TRP 1630.0041
THR 1640.0054
ASP 1650.0059
GLN 1660.0056
ASP 1670.0042
SER 1680.0047
LYS 1690.0163
ASP 1700.0063
SER 1710.0080
THR 1720.0059
TYR 1730.0045
SER 1740.0038
MET 1750.0047
SER 1760.0033
SER 1770.0034
THR 1780.0035
LEU 1790.0022
THR 1800.0025
LEU 1810.0024
THR 1820.0042
LYS 1830.0023
ASP 1840.0046
GLU 1850.0063
TYR 1860.0047
GLU 1870.0038
ARG 1880.0055
HIS 1890.0052
ASN 1900.0038
SER 1910.0025
TYR 1920.0030
THR 1930.0035
CYS 1940.0023
GLU 1950.0031
ALA 1960.0040
THR 1970.0049
HIS 1980.0017
LYS 1990.0079
THR 2000.0103
SER 2010.0061
THR 2020.0047
SER 2030.0197
PRO 2040.0136
ILE 2050.0123
VAL 2060.0055
LYS 2070.0049
SER 2080.0034
PHE 2090.0039
ASN 2100.0039
ARG 2110.0039
ASN 2120.0057
GLU 2130.0037
CYS 2140.0044
GLU 10.0056
VAL 20.0073
GLN 30.0102
LEU 40.0142
VAL 50.0154
GLU 60.0177
SER 70.0210
GLY 80.0184
GLY 90.0159
GLY 100.0110
LEU 110.0028
VAL 120.0071
LYS 130.0219
PRO 140.0126
GLY 150.0287
GLY 160.0242
SER 170.0136
LEU 180.0084
LYS 190.0119
LEU 200.0149
SER 210.0185
CYS 220.0187
ALA 230.0143
ALA 240.0111
SER 250.0045
GLY 260.0032
PHE 270.0057
ILE 280.0102
PHE 290.0079
SER 300.0149
ASP 310.0148
TYR 320.0117
TYR 330.0131
MET 340.0057
TYR 350.0087
TRP 360.0105
VAL 370.0097
ARG 380.0084
GLN 390.0075
THR 400.0110
PRO 410.0079
GLU 420.0160
LYS 430.0100
ARG 440.0138
LEU 450.0125
GLU 460.0029
TRP 470.0022
VAL 480.0032
ALA 490.0087
THR 500.0080
ILE 510.0090
SER 520.0251
ASP 520.0237
GLY 530.0311
ASN 540.0380
SER 550.0242
TYR 560.0276
THR 570.0240
TYR 580.0081
TYR 590.0053
VAL 600.0068
ASP 610.0318
SER 620.0279
VAL 630.0139
LYS 640.0171
GLY 650.0122
ARG 660.0098
PHE 670.0046
THR 680.0064
ILE 690.0086
SER 700.0179
ARG 710.0108
ASP 720.0139
ASN 730.0065
ALA 740.0270
LYS 750.0293
ASN 760.0089
ASN 770.0105
LEU 780.0132
TYR 790.0142
LEU 800.0117
GLN 810.0088
MET 820.0024
SER 820.0119
SER 820.0201
LEU 820.0150
LYS 830.0208
SER 840.0174
GLU 850.0210
ASP 860.0123
THR 870.0072
ALA 880.0079
ILE 890.0107
TYR 900.0134
TYR 910.0136
CYS 920.0131
ALA 930.0115
ARG 940.0079
ASP 950.0072
GLY 960.0069
PRO 970.0189
THR 980.0327
ASP 990.0311
SER 1000.0047
SER 1000.0039
GLY 1000.0042
TYR 1000.0030
GLY 1000.0043
GLY 1000.0028
PHE 1000.0056
GLY 1010.0073
TYR 1020.0104
TRP 1030.0113
GLY 1040.0112
GLN 1050.0102
GLY 1060.0170
THR 1070.0155
LEU 1080.0118
VAL 1090.0085
THR 1100.0031
VAL 1110.0056
SER 1120.0095
GLU 1130.0309
ALA 1140.0132
LYS 1150.0211
THR 1160.0144
THR 1170.0136
PRO 1180.0063
PRO 1190.0068
SER 1200.0084
VAL 1210.0063
TYR 1220.0052
PRO 1230.0059
LEU 1240.0030
ALA 1250.0056
PRO 1260.0078
GLY 1270.0131
SER 1280.0088
ALA 1290.0189
ALA 1300.0193
GLN 1330.0321
THR 1340.0239
ASN 1350.0115
SER 1360.0109
MET 1370.0128
VAL 1380.0146
THR 1390.0050
LEU 1400.0024
GLY 1410.0020
CYS 1420.0059
LEU 1430.0051
VAL 1440.0039
LYS 1450.0069
GLY 1460.0074
TYR 1470.0061
PHE 1480.0063
PRO 1490.0057
GLU 1500.0041
PRO 1510.0063
VAL 1520.0038
THR 1530.0044
VAL 1540.0067
THR 1560.0078
TRP 1570.0057
ASN 1620.0052
SER 1630.0055
GLY 1640.0030
SER 1650.0110
LEU 1660.0097
SER 1670.0182
SER 1680.0222
GLY 1690.0147
VAL 1710.0077
HIS 1720.0042
THR 1730.0034
PHE 1740.0019
PRO 1750.0022
ALA 1760.0023
VAL 1770.0048
LEU 1780.0044
GLN 1790.0102
SER 1800.0122
ASP 1830.0072
LEU 1840.0081
TYR 1850.0069
THR 1860.0042
LEU 1870.0029
SER 1880.0027
SER 1890.0027
SER 1900.0036
VAL 1910.0049
THR 1920.0119
VAL 1930.0088
PRO 1940.0074
SER 1950.0023
SER 1960.0242
PRO 1980.0204
ARG 1990.0142
PRO 2000.0071
SER 2020.0154
GLU 2030.0224
THR 2040.0170
VAL 2050.0102
THR 2060.0109
CYS 2080.0105
ASN 2090.0097
VAL 2100.0092
ALA 2110.0079
HIS 2120.0024
PRO 2130.0081
ALA 2140.0097
SER 2150.0046
SER 2160.0129
THR 2170.0105
LYS 2180.0114
VAL 2190.0143
ASP 2200.0109
LYS 2210.0097
LYS 2220.0093
ILE 2230.0045
VAL 2260.0063
PRO 2270.0114
ARG 2280.0117
ASP 2320.0207
CYS 2330.0136

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.