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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 75  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0780
ILE 4790.0415
PHE 4800.0342
ILE 4810.0024
SER 4820.0132
ASP 4830.0121
ASP 4840.0131
LYS 4850.0052
ASP 4860.0097
SER 4870.0104
LEU 4880.0033
LYS 4890.0046
CYS 4900.0033
PRO 4910.0117
CYS 4920.0079
ASP 4930.0050
PRO 4940.0039
GLU 4950.0034
MET 4960.0037
VAL 4970.0099
SER 4980.0062
GLN 4990.0087
SER 5000.0168
THR 5010.0109
CYS 5020.0120
ARG 5030.0040
PHE 5040.0088
PHE 5050.0048
VAL 5060.0063
CYS 5070.0069
LYS 5080.0067
CYS 5090.0109
VAL 5100.0204
GLU 5110.0295
ARG 5120.0780
SER 20.0277
VAL 30.0317
LEU 40.0293
SER 50.0130
GLN 60.0129
SER 70.0168
PRO 80.0300
ALA 90.0249
ILE 100.0273
LEU 110.0191
SER 120.0091
ALA 130.0094
SER 140.0156
PRO 150.0194
GLY 160.0241
GLU 170.0113
LYS 180.0119
VAL 190.0111
THR 200.0197
MET 210.0149
THR 220.0131
CYS 230.0209
ARG 240.0204
ALA 250.0192
ARG 260.0222
SER 270.0150
SER 290.0073
VAL 300.0108
SER 310.0086
TYR 320.0116
MET 330.0149
HIS 340.0155
TRP 350.0102
TYR 360.0084
GLN 370.0074
GLN 380.0050
LYS 390.0054
SER 400.0047
GLY 410.0237
SER 420.0158
SER 430.0081
PRO 440.0067
LYS 450.0084
PRO 460.0065
TRP 470.0070
ILE 480.0082
HIS 490.0099
ALA 500.0144
THR 510.0148
SER 520.0140
ASN 530.0117
LEU 540.0071
ALA 550.0072
SER 560.0177
GLY 570.0178
VAL 580.0103
PRO 590.0128
ALA 600.0113
ARG 610.0149
PHE 620.0060
SER 630.0060
GLY 640.0105
SER 650.0161
GLY 660.0168
SER 670.0195
GLY 680.0143
THR 690.0167
SER 700.0198
TYR 710.0136
SER 720.0099
LEU 730.0101
THR 740.0143
ILE 750.0124
SER 760.0127
ARG 770.0252
VAL 780.0168
GLU 790.0176
ALA 800.0059
GLU 810.0105
ASP 820.0099
ALA 830.0098
ALA 840.0081
THR 850.0077
TYR 860.0065
TYR 870.0071
CYS 880.0111
GLN 890.0173
GLN 900.0128
TRP 910.0097
SER 920.0042
SER 930.0090
HIS 940.0143
PRO 950.0189
PRO 960.0140
THR 970.0203
PHE 980.0141
GLY 990.0122
SER 1000.0038
GLY 1010.0046
THR 1020.0120
LYS 1030.0133
LEU 1040.0115
GLU 1050.0062
ILE 1060.0041
LYS 1070.0122
ARG 1080.0140
ALA 1090.0182
ASP 1100.0174
ALA 1110.0182
ALA 1120.0171
PRO 1130.0086
THR 1140.0110
VAL 1150.0083
SER 1160.0053
ILE 1170.0038
PHE 1180.0020
PRO 1190.0035
PRO 1200.0035
SER 1210.0035
SER 1220.0084
GLU 1230.0048
GLN 1240.0046
LEU 1250.0050
THR 1260.0060
SER 1270.0052
GLY 1280.0043
GLY 1290.0054
ALA 1300.0065
SER 1310.0033
VAL 1320.0027
VAL 1330.0036
CYS 1340.0050
PHE 1350.0064
LEU 1360.0082
ASN 1370.0109
ASN 1380.0099
PHE 1390.0090
TYR 1400.0099
PRO 1410.0063
LYS 1420.0046
ASP 1430.0068
ILE 1440.0071
ASN 1450.0127
VAL 1460.0097
LYS 1470.0078
TRP 1480.0048
LYS 1490.0068
ILE 1500.0072
ASP 1510.0073
GLY 1520.0047
SER 1530.0151
GLU 1540.0147
ARG 1550.0087
GLN 1560.0089
ASN 1570.0114
GLY 1580.0035
VAL 1590.0044
LEU 1600.0068
ASN 1610.0060
SER 1620.0065
TRP 1630.0084
THR 1640.0080
ASP 1650.0063
GLN 1660.0044
ASP 1670.0073
SER 1680.0080
LYS 1690.0138
ASP 1700.0078
SER 1710.0051
THR 1720.0093
TYR 1730.0072
SER 1740.0089
MET 1750.0094
SER 1760.0073
SER 1770.0056
THR 1780.0045
LEU 1790.0040
THR 1800.0058
LEU 1810.0069
THR 1820.0095
LYS 1830.0080
ASP 1840.0088
GLU 1850.0097
TYR 1860.0083
GLU 1870.0079
ARG 1880.0110
HIS 1890.0098
ASN 1900.0079
SER 1910.0067
TYR 1920.0081
THR 1930.0086
CYS 1940.0063
GLU 1950.0080
ALA 1960.0092
THR 1970.0085
HIS 1980.0065
LYS 1990.0101
THR 2000.0093
SER 2010.0106
THR 2020.0219
SER 2030.0150
PRO 2040.0139
ILE 2050.0078
VAL 2060.0055
LYS 2070.0041
SER 2080.0049
PHE 2090.0065
ASN 2100.0061
ARG 2110.0057
ASN 2120.0183
GLU 2130.0144
CYS 2140.0264
GLU 10.0145
VAL 20.0121
GLN 30.0072
LEU 40.0050
VAL 50.0016
GLU 60.0017
SER 70.0123
GLY 80.0174
GLY 90.0180
GLY 100.0237
LEU 110.0175
VAL 120.0102
LYS 130.0101
PRO 140.0171
GLY 150.0269
GLY 160.0141
SER 170.0126
LEU 180.0165
LYS 190.0073
LEU 200.0069
SER 210.0062
CYS 220.0062
ALA 230.0075
ALA 240.0108
SER 250.0082
GLY 260.0096
PHE 270.0116
ILE 280.0128
PHE 290.0134
SER 300.0140
ASP 310.0104
TYR 320.0090
TYR 330.0096
MET 340.0060
TYR 350.0063
TRP 360.0056
VAL 370.0070
ARG 380.0054
GLN 390.0039
THR 400.0106
PRO 410.0080
GLU 420.0197
LYS 430.0103
ARG 440.0106
LEU 450.0086
GLU 460.0022
TRP 470.0027
VAL 480.0032
ALA 490.0066
THR 500.0066
ILE 510.0063
SER 520.0111
ASP 520.0130
GLY 530.0198
ASN 540.0232
SER 550.0135
TYR 560.0134
THR 570.0099
TYR 580.0041
TYR 590.0074
VAL 600.0118
ASP 610.0546
SER 620.0442
VAL 630.0206
LYS 640.0274
GLY 650.0247
ARG 660.0131
PHE 670.0057
THR 680.0046
ILE 690.0043
SER 700.0091
ARG 710.0095
ASP 720.0107
ASN 730.0141
ALA 740.0160
LYS 750.0188
ASN 760.0132
ASN 770.0118
LEU 780.0109
TYR 790.0064
LEU 800.0072
GLN 810.0067
MET 820.0094
SER 820.0119
SER 820.0147
LEU 820.0091
LYS 830.0175
SER 840.0207
GLU 850.0214
ASP 860.0155
THR 870.0182
ALA 880.0115
ILE 890.0105
TYR 900.0098
TYR 910.0065
CYS 920.0053
ALA 930.0060
ARG 940.0080
ASP 950.0057
GLY 960.0035
PRO 970.0075
THR 980.0178
ASP 990.0227
SER 1000.0061
SER 1000.0031
GLY 1000.0022
TYR 1000.0043
GLY 1000.0073
GLY 1000.0085
PHE 1000.0097
GLY 1010.0079
TYR 1020.0090
TRP 1030.0082
GLY 1040.0071
GLN 1050.0065
GLY 1060.0095
THR 1070.0131
LEU 1080.0162
VAL 1090.0214
THR 1100.0199
VAL 1110.0134
SER 1120.0149
GLU 1130.0126
ALA 1140.0131
LYS 1150.0074
THR 1160.0081
THR 1170.0089
PRO 1180.0099
PRO 1190.0077
SER 1200.0088
VAL 1210.0015
TYR 1220.0017
PRO 1230.0046
LEU 1240.0042
ALA 1250.0058
PRO 1260.0092
GLY 1270.0255
SER 1280.0201
ALA 1290.0307
ALA 1300.0323
GLN 1330.0675
THR 1340.0418
ASN 1350.0486
SER 1360.0345
MET 1370.0310
VAL 1380.0328
THR 1390.0093
LEU 1400.0076
GLY 1410.0059
CYS 1420.0033
LEU 1430.0020
VAL 1440.0019
LYS 1450.0062
GLY 1460.0067
TYR 1470.0060
PHE 1480.0022
PRO 1490.0038
GLU 1500.0026
PRO 1510.0033
VAL 1520.0062
THR 1530.0102
VAL 1540.0075
THR 1560.0138
TRP 1570.0112
ASN 1620.0204
SER 1630.0314
GLY 1640.0277
SER 1650.0186
LEU 1660.0104
SER 1670.0373
SER 1680.0727
GLY 1690.0373
VAL 1710.0094
HIS 1720.0073
THR 1730.0085
PHE 1740.0039
PRO 1750.0037
ALA 1760.0037
VAL 1770.0067
LEU 1780.0063
GLN 1790.0094
SER 1800.0189
ASP 1830.0056
LEU 1840.0038
TYR 1850.0050
THR 1860.0050
LEU 1870.0033
SER 1880.0038
SER 1890.0047
SER 1900.0057
VAL 1910.0052
THR 1920.0131
VAL 1930.0123
PRO 1940.0195
SER 1950.0068
SER 1960.0342
PRO 1980.0322
ARG 1990.0247
PRO 2000.0158
SER 2020.0204
GLU 2030.0397
THR 2040.0348
VAL 2050.0175
THR 2060.0152
CYS 2080.0094
ASN 2090.0072
VAL 2100.0094
ALA 2110.0108
HIS 2120.0083
PRO 2130.0087
ALA 2140.0100
SER 2150.0144
SER 2160.0140
THR 2170.0083
LYS 2180.0163
VAL 2190.0149
ASP 2200.0114
LYS 2210.0114
LYS 2220.0158
ILE 2230.0128
VAL 2260.0118
PRO 2270.0215
ARG 2280.0226
ASP 2320.0366
CYS 2330.0408

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.