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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 77  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0623
ILE 4790.0342
PHE 4800.0157
ILE 4810.0149
SER 4820.0088
ASP 4830.0092
ASP 4840.0117
LYS 4850.0081
ASP 4860.0180
SER 4870.0181
LEU 4880.0128
LYS 4890.0134
CYS 4900.0073
PRO 4910.0092
CYS 4920.0060
ASP 4930.0045
PRO 4940.0024
GLU 4950.0075
MET 4960.0094
VAL 4970.0094
SER 4980.0085
GLN 4990.0094
SER 5000.0114
THR 5010.0183
CYS 5020.0126
ARG 5030.0084
PHE 5040.0107
PHE 5050.0103
VAL 5060.0038
CYS 5070.0056
LYS 5080.0077
CYS 5090.0046
VAL 5100.0111
GLU 5110.0150
ARG 5120.0474
SER 20.0259
VAL 30.0301
LEU 40.0285
SER 50.0169
GLN 60.0146
SER 70.0166
PRO 80.0213
ALA 90.0189
ILE 100.0224
LEU 110.0190
SER 120.0145
ALA 130.0088
SER 140.0118
PRO 150.0108
GLY 160.0091
GLU 170.0052
LYS 180.0150
VAL 190.0187
THR 200.0196
MET 210.0119
THR 220.0098
CYS 230.0214
ARG 240.0246
ALA 250.0216
ARG 260.0242
SER 270.0190
SER 290.0088
VAL 300.0075
SER 310.0057
TYR 320.0034
MET 330.0059
HIS 340.0052
TRP 350.0021
TYR 360.0014
GLN 370.0040
GLN 380.0070
LYS 390.0092
SER 400.0118
GLY 410.0247
SER 420.0143
SER 430.0085
PRO 440.0077
LYS 450.0048
PRO 460.0060
TRP 470.0093
ILE 480.0062
HIS 490.0059
ALA 500.0057
THR 510.0060
SER 520.0061
ASN 530.0083
LEU 540.0119
ALA 550.0179
SER 560.0494
GLY 570.0378
VAL 580.0194
PRO 590.0235
ALA 600.0257
ARG 610.0211
PHE 620.0103
SER 630.0089
GLY 640.0101
SER 650.0128
GLY 660.0178
SER 670.0219
GLY 680.0174
THR 690.0216
SER 700.0248
TYR 710.0120
SER 720.0076
LEU 730.0066
THR 740.0150
ILE 750.0129
SER 760.0145
ARG 770.0162
VAL 780.0106
GLU 790.0142
ALA 800.0108
GLU 810.0114
ASP 820.0103
ALA 830.0034
ALA 840.0042
THR 850.0063
TYR 860.0036
TYR 870.0039
CYS 880.0066
GLN 890.0088
GLN 900.0053
TRP 910.0032
SER 920.0050
SER 930.0070
HIS 940.0092
PRO 950.0133
PRO 960.0071
THR 970.0122
PHE 980.0118
GLY 990.0139
SER 1000.0088
GLY 1010.0063
THR 1020.0089
LYS 1030.0107
LEU 1040.0065
GLU 1050.0045
ILE 1060.0015
LYS 1070.0070
ARG 1080.0089
ALA 1090.0126
ASP 1100.0073
ALA 1110.0075
ALA 1120.0073
PRO 1130.0103
THR 1140.0142
VAL 1150.0120
SER 1160.0098
ILE 1170.0079
PHE 1180.0052
PRO 1190.0044
PRO 1200.0037
SER 1210.0028
SER 1220.0097
GLU 1230.0061
GLN 1240.0032
LEU 1250.0024
THR 1260.0068
SER 1270.0047
GLY 1280.0046
GLY 1290.0042
ALA 1300.0048
SER 1310.0034
VAL 1320.0045
VAL 1330.0055
CYS 1340.0061
PHE 1350.0075
LEU 1360.0102
ASN 1370.0113
ASN 1380.0119
PHE 1390.0094
TYR 1400.0019
PRO 1410.0040
LYS 1420.0092
ASP 1430.0126
ILE 1440.0096
ASN 1450.0149
VAL 1460.0124
LYS 1470.0091
TRP 1480.0054
LYS 1490.0037
ILE 1500.0042
ASP 1510.0038
GLY 1520.0121
SER 1530.0243
GLU 1540.0307
ARG 1550.0131
GLN 1560.0061
ASN 1570.0139
GLY 1580.0086
VAL 1590.0098
LEU 1600.0081
ASN 1610.0086
SER 1620.0081
TRP 1630.0094
THR 1640.0071
ASP 1650.0071
GLN 1660.0060
ASP 1670.0081
SER 1680.0115
LYS 1690.0270
ASP 1700.0092
SER 1710.0090
THR 1720.0096
TYR 1730.0091
SER 1740.0103
MET 1750.0106
SER 1760.0080
SER 1770.0069
THR 1780.0062
LEU 1790.0056
THR 1800.0047
LEU 1810.0042
THR 1820.0067
LYS 1830.0069
ASP 1840.0074
GLU 1850.0070
TYR 1860.0069
GLU 1870.0072
ARG 1880.0058
HIS 1890.0064
ASN 1900.0075
SER 1910.0066
TYR 1920.0066
THR 1930.0060
CYS 1940.0037
GLU 1950.0025
ALA 1960.0057
THR 1970.0037
HIS 1980.0017
LYS 1990.0060
THR 2000.0032
SER 2010.0076
THR 2020.0233
SER 2030.0178
PRO 2040.0101
ILE 2050.0102
VAL 2060.0112
LYS 2070.0124
SER 2080.0111
PHE 2090.0074
ASN 2100.0067
ARG 2110.0061
ASN 2120.0312
GLU 2130.0245
CYS 2140.0377
GLU 10.0161
VAL 20.0180
GLN 30.0242
LEU 40.0144
VAL 50.0131
GLU 60.0140
SER 70.0175
GLY 80.0152
GLY 90.0130
GLY 100.0132
LEU 110.0114
VAL 120.0132
LYS 130.0290
PRO 140.0096
GLY 150.0145
GLY 160.0131
SER 170.0125
LEU 180.0126
LYS 190.0100
LEU 200.0096
SER 210.0127
CYS 220.0085
ALA 230.0085
ALA 240.0113
SER 250.0124
GLY 260.0125
PHE 270.0143
ILE 280.0196
PHE 290.0179
SER 300.0187
ASP 310.0124
TYR 320.0124
TYR 330.0132
MET 340.0077
TYR 350.0075
TRP 360.0074
VAL 370.0083
ARG 380.0072
GLN 390.0068
THR 400.0113
PRO 410.0104
GLU 420.0182
LYS 430.0102
ARG 440.0145
LEU 450.0138
GLU 460.0042
TRP 470.0063
VAL 480.0072
ALA 490.0102
THR 500.0105
ILE 510.0094
SER 520.0172
ASP 520.0141
GLY 530.0158
ASN 540.0196
SER 550.0135
TYR 560.0151
THR 570.0138
TYR 580.0069
TYR 590.0107
VAL 600.0164
ASP 610.0496
SER 620.0402
VAL 630.0200
LYS 640.0240
GLY 650.0254
ARG 660.0174
PHE 670.0094
THR 680.0086
ILE 690.0093
SER 700.0083
ARG 710.0089
ASP 720.0074
ASN 730.0144
ALA 740.0119
LYS 750.0108
ASN 760.0090
ASN 770.0077
LEU 780.0080
TYR 790.0097
LEU 800.0092
GLN 810.0097
MET 820.0132
SER 820.0180
SER 820.0198
LEU 820.0133
LYS 830.0172
SER 840.0183
GLU 850.0182
ASP 860.0087
THR 870.0112
ALA 880.0094
ILE 890.0107
TYR 900.0109
TYR 910.0109
CYS 920.0107
ALA 930.0103
ARG 940.0109
ASP 950.0053
GLY 960.0092
PRO 970.0301
THR 980.0352
ASP 990.0383
SER 1000.0126
SER 1000.0083
GLY 1000.0074
TYR 1000.0070
GLY 1000.0045
GLY 1000.0007
PHE 1000.0056
GLY 1010.0085
TYR 1020.0127
TRP 1030.0112
GLY 1040.0125
GLN 1050.0119
GLY 1060.0181
THR 1070.0151
LEU 1080.0132
VAL 1090.0116
THR 1100.0110
VAL 1110.0102
SER 1120.0125
GLU 1130.0309
ALA 1140.0074
LYS 1150.0353
THR 1160.0143
THR 1170.0079
PRO 1180.0104
PRO 1190.0105
SER 1200.0150
VAL 1210.0089
TYR 1220.0058
PRO 1230.0029
LEU 1240.0024
ALA 1250.0025
PRO 1260.0069
GLY 1270.0247
SER 1280.0328
ALA 1290.0472
ALA 1300.0266
GLN 1330.0623
THR 1340.0204
ASN 1350.0450
SER 1360.0373
MET 1370.0341
VAL 1380.0351
THR 1390.0125
LEU 1400.0105
GLY 1410.0086
CYS 1420.0023
LEU 1430.0046
VAL 1440.0071
LYS 1450.0103
GLY 1460.0064
TYR 1470.0041
PHE 1480.0059
PRO 1490.0061
GLU 1500.0042
PRO 1510.0024
VAL 1520.0075
THR 1530.0134
VAL 1540.0098
THR 1560.0133
TRP 1570.0094
ASN 1620.0180
SER 1630.0285
GLY 1640.0271
SER 1650.0166
LEU 1660.0071
SER 1670.0294
SER 1680.0566
GLY 1690.0294
VAL 1710.0068
HIS 1720.0052
THR 1730.0047
PHE 1740.0017
PRO 1750.0054
ALA 1760.0077
VAL 1770.0185
LEU 1780.0157
GLN 1790.0223
SER 1800.0106
ASP 1830.0117
LEU 1840.0041
TYR 1850.0043
THR 1860.0105
LEU 1870.0060
SER 1880.0029
SER 1890.0042
SER 1900.0060
VAL 1910.0064
THR 1920.0175
VAL 1930.0158
PRO 1940.0246
SER 1950.0219
SER 1960.0229
PRO 1980.0175
ARG 1990.0192
PRO 2000.0205
SER 2020.0162
GLU 2030.0216
THR 2040.0242
VAL 2050.0107
THR 2060.0097
CYS 2080.0091
ASN 2090.0077
VAL 2100.0116
ALA 2110.0182
HIS 2120.0146
PRO 2130.0169
ALA 2140.0200
SER 2150.0222
SER 2160.0297
THR 2170.0178
LYS 2180.0138
VAL 2190.0158
ASP 2200.0058
LYS 2210.0043
LYS 2220.0078
ILE 2230.0118
VAL 2260.0208
PRO 2270.0228
ARG 2280.0186
ASP 2320.0365
CYS 2330.0466

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.