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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0945
ILE 4790.0293
PHE 4800.0275
ILE 4810.0092
SER 4820.0164
ASP 4830.0123
ASP 4840.0140
LYS 4850.0067
ASP 4860.0114
SER 4870.0128
LEU 4880.0110
LYS 4890.0130
CYS 4900.0123
PRO 4910.0141
CYS 4920.0099
ASP 4930.0055
PRO 4940.0117
GLU 4950.0070
MET 4960.0067
VAL 4970.0209
SER 4980.0218
GLN 4990.0225
SER 5000.0266
THR 5010.0385
CYS 5020.0393
ARG 5030.0186
PHE 5040.0128
PHE 5050.0132
VAL 5060.0113
CYS 5070.0128
LYS 5080.0115
CYS 5090.0157
VAL 5100.0116
GLU 5110.0185
ARG 5120.0554
SER 20.0167
VAL 30.0189
LEU 40.0150
SER 50.0088
GLN 60.0103
SER 70.0126
PRO 80.0177
ALA 90.0190
ILE 100.0200
LEU 110.0212
SER 120.0157
ALA 130.0094
SER 140.0078
PRO 150.0067
GLY 160.0108
GLU 170.0046
LYS 180.0088
VAL 190.0157
THR 200.0160
MET 210.0122
THR 220.0088
CYS 230.0126
ARG 240.0132
ALA 250.0127
ARG 260.0232
SER 270.0184
SER 290.0077
VAL 300.0068
SER 310.0053
TYR 320.0107
MET 330.0091
HIS 340.0066
TRP 350.0018
TYR 360.0023
GLN 370.0030
GLN 380.0067
LYS 390.0035
SER 400.0140
GLY 410.0577
SER 420.0303
SER 430.0032
PRO 440.0060
LYS 450.0042
PRO 460.0049
TRP 470.0070
ILE 480.0100
HIS 490.0129
ALA 500.0109
THR 510.0121
SER 520.0135
ASN 530.0201
LEU 540.0122
ALA 550.0092
SER 560.0404
GLY 570.0345
VAL 580.0129
PRO 590.0111
ALA 600.0137
ARG 610.0155
PHE 620.0081
SER 630.0056
GLY 640.0066
SER 650.0117
GLY 660.0122
SER 670.0126
GLY 680.0103
THR 690.0135
SER 700.0144
TYR 710.0067
SER 720.0049
LEU 730.0077
THR 740.0129
ILE 750.0116
SER 760.0112
ARG 770.0103
VAL 780.0086
GLU 790.0109
ALA 800.0058
GLU 810.0116
ASP 820.0117
ALA 830.0099
ALA 840.0097
THR 850.0104
TYR 860.0060
TYR 870.0041
CYS 880.0031
GLN 890.0047
GLN 900.0069
TRP 910.0089
SER 920.0085
SER 930.0054
HIS 940.0094
PRO 950.0107
PRO 960.0088
THR 970.0070
PHE 980.0055
GLY 990.0054
SER 1000.0042
GLY 1010.0120
THR 1020.0138
LYS 1030.0152
LEU 1040.0139
GLU 1050.0107
ILE 1060.0060
LYS 1070.0083
ARG 1080.0074
ALA 1090.0064
ASP 1100.0115
ALA 1110.0117
ALA 1120.0100
PRO 1130.0069
THR 1140.0090
VAL 1150.0087
SER 1160.0062
ILE 1170.0054
PHE 1180.0043
PRO 1190.0030
PRO 1200.0045
SER 1210.0072
SER 1220.0083
GLU 1230.0043
GLN 1240.0034
LEU 1250.0049
THR 1260.0096
SER 1270.0105
GLY 1280.0054
GLY 1290.0024
ALA 1300.0027
SER 1310.0047
VAL 1320.0045
VAL 1330.0047
CYS 1340.0069
PHE 1350.0068
LEU 1360.0078
ASN 1370.0101
ASN 1380.0092
PHE 1390.0074
TYR 1400.0049
PRO 1410.0025
LYS 1420.0043
ASP 1430.0092
ILE 1440.0054
ASN 1450.0081
VAL 1460.0060
LYS 1470.0061
TRP 1480.0064
LYS 1490.0106
ILE 1500.0104
ASP 1510.0114
GLY 1520.0134
SER 1530.0154
GLU 1540.0173
ARG 1550.0163
GLN 1560.0174
ASN 1570.0188
GLY 1580.0094
VAL 1590.0089
LEU 1600.0092
ASN 1610.0085
SER 1620.0074
TRP 1630.0081
THR 1640.0072
ASP 1650.0067
GLN 1660.0055
ASP 1670.0056
SER 1680.0083
LYS 1690.0161
ASP 1700.0108
SER 1710.0083
THR 1720.0104
TYR 1730.0072
SER 1740.0083
MET 1750.0088
SER 1760.0069
SER 1770.0079
THR 1780.0067
LEU 1790.0061
THR 1800.0049
LEU 1810.0040
THR 1820.0051
LYS 1830.0041
ASP 1840.0021
GLU 1850.0037
TYR 1860.0034
GLU 1870.0041
ARG 1880.0047
HIS 1890.0073
ASN 1900.0093
SER 1910.0069
TYR 1920.0069
THR 1930.0071
CYS 1940.0016
GLU 1950.0024
ALA 1960.0046
THR 1970.0060
HIS 1980.0079
LYS 1990.0140
THR 2000.0107
SER 2010.0097
THR 2020.0182
SER 2030.0056
PRO 2040.0065
ILE 2050.0082
VAL 2060.0053
LYS 2070.0034
SER 2080.0029
PHE 2090.0061
ASN 2100.0079
ARG 2110.0087
ASN 2120.0133
GLU 2130.0120
CYS 2140.0166
GLU 10.0429
VAL 20.0210
GLN 30.0155
LEU 40.0083
VAL 50.0089
GLU 60.0052
SER 70.0041
GLY 80.0064
GLY 90.0067
GLY 100.0177
LEU 110.0177
VAL 120.0229
LYS 130.0286
PRO 140.0081
GLY 150.0062
GLY 160.0101
SER 170.0065
LEU 180.0071
LYS 190.0060
LEU 200.0048
SER 210.0095
CYS 220.0090
ALA 230.0072
ALA 240.0050
SER 250.0092
GLY 260.0052
PHE 270.0109
ILE 280.0065
PHE 290.0037
SER 300.0079
ASP 310.0036
TYR 320.0010
TYR 330.0065
MET 340.0079
TYR 350.0084
TRP 360.0085
VAL 370.0093
ARG 380.0074
GLN 390.0067
THR 400.0080
PRO 410.0088
GLU 420.0073
LYS 430.0092
ARG 440.0088
LEU 450.0084
GLU 460.0068
TRP 470.0061
VAL 480.0057
ALA 490.0121
THR 500.0117
ILE 510.0117
SER 520.0185
ASP 520.0195
GLY 530.0322
ASN 540.0382
SER 550.0260
TYR 560.0292
THR 570.0264
TYR 580.0145
TYR 590.0146
VAL 600.0156
ASP 610.0131
SER 620.0095
VAL 630.0103
LYS 640.0114
GLY 650.0180
ARG 660.0191
PHE 670.0096
THR 680.0067
ILE 690.0079
SER 700.0137
ARG 710.0123
ASP 720.0143
ASN 730.0138
ALA 740.0141
LYS 750.0128
ASN 760.0054
ASN 770.0077
LEU 780.0092
TYR 790.0097
LEU 800.0071
GLN 810.0068
MET 820.0121
SER 820.0114
SER 820.0143
LEU 820.0172
LYS 830.0231
SER 840.0271
GLU 850.0297
ASP 860.0196
THR 870.0199
ALA 880.0109
ILE 890.0074
TYR 900.0074
TYR 910.0094
CYS 920.0109
ALA 930.0130
ARG 940.0191
ASP 950.0126
GLY 960.0163
PRO 970.0544
THR 980.0898
ASP 990.0945
SER 1000.0206
SER 1000.0143
GLY 1000.0100
TYR 1000.0095
GLY 1000.0064
GLY 1000.0036
PHE 1000.0056
GLY 1010.0091
TYR 1020.0158
TRP 1030.0111
GLY 1040.0106
GLN 1050.0092
GLY 1060.0072
THR 1070.0023
LEU 1080.0073
VAL 1090.0131
THR 1100.0180
VAL 1110.0181
SER 1120.0143
GLU 1130.0197
ALA 1140.0163
LYS 1150.0276
THR 1160.0156
THR 1170.0159
PRO 1180.0171
PRO 1190.0152
SER 1200.0169
VAL 1210.0104
TYR 1220.0097
PRO 1230.0102
LEU 1240.0081
ALA 1250.0102
PRO 1260.0106
GLY 1270.0163
SER 1280.0150
ALA 1290.0231
ALA 1300.0274
GLN 1330.0233
THR 1340.0099
ASN 1350.0089
SER 1360.0098
MET 1370.0133
VAL 1380.0152
THR 1390.0071
LEU 1400.0045
GLY 1410.0028
CYS 1420.0076
LEU 1430.0078
VAL 1440.0077
LYS 1450.0103
GLY 1460.0115
TYR 1470.0120
PHE 1480.0084
PRO 1490.0085
GLU 1500.0091
PRO 1510.0089
VAL 1520.0033
THR 1530.0130
VAL 1540.0133
THR 1560.0114
TRP 1570.0050
ASN 1620.0241
SER 1630.0243
GLY 1640.0205
SER 1650.0309
LEU 1660.0253
SER 1670.0207
SER 1680.0392
GLY 1690.0251
VAL 1710.0034
HIS 1720.0017
THR 1730.0029
PHE 1740.0035
PRO 1750.0036
ALA 1760.0047
VAL 1770.0058
LEU 1780.0090
GLN 1790.0072
SER 1800.0088
ASP 1830.0088
LEU 1840.0088
TYR 1850.0094
THR 1860.0068
LEU 1870.0054
SER 1880.0050
SER 1890.0029
SER 1900.0014
VAL 1910.0009
THR 1920.0107
VAL 1930.0108
PRO 1940.0116
SER 1950.0126
SER 1960.0227
PRO 1980.0208
ARG 1990.0157
PRO 2000.0121
SER 2020.0213
GLU 2030.0178
THR 2040.0150
VAL 2050.0074
THR 2060.0060
CYS 2080.0090
ASN 2090.0146
VAL 2100.0171
ALA 2110.0158
HIS 2120.0063
PRO 2130.0123
ALA 2140.0261
SER 2150.0301
SER 2160.0245
THR 2170.0174
LYS 2180.0318
VAL 2190.0336
ASP 2200.0130
LYS 2210.0069
LYS 2220.0043
ILE 2230.0032
VAL 2260.0047
PRO 2270.0056
ARG 2280.0073
ASP 2320.0029
CYS 2330.0090

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.