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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0562
ILE 4790.0184
PHE 4800.0143
ILE 4810.0057
SER 4820.0115
ASP 4830.0111
ASP 4840.0095
LYS 4850.0052
ASP 4860.0032
SER 4870.0049
LEU 4880.0028
LYS 4890.0023
CYS 4900.0042
PRO 4910.0048
CYS 4920.0042
ASP 4930.0059
PRO 4940.0058
GLU 4950.0069
MET 4960.0076
VAL 4970.0103
SER 4980.0038
GLN 4990.0073
SER 5000.0134
THR 5010.0092
CYS 5020.0095
ARG 5030.0040
PHE 5040.0079
PHE 5050.0066
VAL 5060.0044
CYS 5070.0035
LYS 5080.0026
CYS 5090.0069
VAL 5100.0108
GLU 5110.0100
ARG 5120.0120
SER 20.0205
VAL 30.0204
LEU 40.0168
SER 50.0215
GLN 60.0145
SER 70.0237
PRO 80.0117
ALA 90.0127
ILE 100.0190
LEU 110.0213
SER 120.0209
ALA 130.0193
SER 140.0250
PRO 150.0209
GLY 160.0175
GLU 170.0183
LYS 180.0204
VAL 190.0157
THR 200.0122
MET 210.0115
THR 220.0172
CYS 230.0200
ARG 240.0261
ALA 250.0165
ARG 260.0236
SER 270.0173
SER 290.0127
VAL 300.0131
SER 310.0147
TYR 320.0098
MET 330.0100
HIS 340.0115
TRP 350.0092
TYR 360.0110
GLN 370.0109
GLN 380.0181
LYS 390.0200
SER 400.0226
GLY 410.0303
SER 420.0202
SER 430.0113
PRO 440.0106
LYS 450.0107
PRO 460.0098
TRP 470.0086
ILE 480.0099
HIS 490.0119
ALA 500.0142
THR 510.0093
SER 520.0091
ASN 530.0122
LEU 540.0124
ALA 550.0121
SER 560.0314
GLY 570.0289
VAL 580.0258
PRO 590.0368
ALA 600.0401
ARG 610.0300
PHE 620.0170
SER 630.0137
GLY 640.0101
SER 650.0146
GLY 660.0239
SER 670.0316
GLY 680.0198
THR 690.0174
SER 700.0290
TYR 710.0130
SER 720.0118
LEU 730.0077
THR 740.0179
ILE 750.0174
SER 760.0240
ARG 770.0144
VAL 780.0050
GLU 790.0194
ALA 800.0205
GLU 810.0232
ASP 820.0188
ALA 830.0184
ALA 840.0170
THR 850.0175
TYR 860.0109
TYR 870.0111
CYS 880.0114
GLN 890.0143
GLN 900.0122
TRP 910.0084
SER 920.0104
SER 930.0085
HIS 940.0045
PRO 950.0046
PRO 960.0079
THR 970.0113
PHE 980.0136
GLY 990.0124
SER 1000.0140
GLY 1010.0107
THR 1020.0106
LYS 1030.0162
LEU 1040.0206
GLU 1050.0193
ILE 1060.0188
LYS 1070.0162
ARG 1080.0148
ALA 1090.0216
ASP 1100.0161
ALA 1110.0131
ALA 1120.0135
PRO 1130.0103
THR 1140.0112
VAL 1150.0099
SER 1160.0031
ILE 1170.0052
PHE 1180.0081
PRO 1190.0137
PRO 1200.0127
SER 1210.0063
SER 1220.0095
GLU 1230.0059
GLN 1240.0012
LEU 1250.0060
THR 1260.0079
SER 1270.0097
GLY 1280.0045
GLY 1290.0110
ALA 1300.0158
SER 1310.0157
VAL 1320.0139
VAL 1330.0102
CYS 1340.0073
PHE 1350.0079
LEU 1360.0095
ASN 1370.0160
ASN 1380.0155
PHE 1390.0150
TYR 1400.0162
PRO 1410.0201
LYS 1420.0242
ASP 1430.0327
ILE 1440.0202
ASN 1450.0182
VAL 1460.0061
LYS 1470.0064
TRP 1480.0097
LYS 1490.0090
ILE 1500.0084
ASP 1510.0146
GLY 1520.0166
SER 1530.0110
GLU 1540.0169
ARG 1550.0124
GLN 1560.0165
ASN 1570.0249
GLY 1580.0208
VAL 1590.0181
LEU 1600.0140
ASN 1610.0073
SER 1620.0148
TRP 1630.0196
THR 1640.0125
ASP 1650.0093
GLN 1660.0091
ASP 1670.0101
SER 1680.0094
LYS 1690.0236
ASP 1700.0135
SER 1710.0146
THR 1720.0152
TYR 1730.0152
SER 1740.0148
MET 1750.0142
SER 1760.0102
SER 1770.0050
THR 1780.0122
LEU 1790.0188
THR 1800.0180
LEU 1810.0166
THR 1820.0105
LYS 1830.0065
ASP 1840.0077
GLU 1850.0046
TYR 1860.0122
GLU 1870.0160
ARG 1880.0156
HIS 1890.0169
ASN 1900.0233
SER 1910.0175
TYR 1920.0158
THR 1930.0142
CYS 1940.0042
GLU 1950.0051
ALA 1960.0076
THR 1970.0130
HIS 1980.0112
LYS 1990.0205
THR 2000.0193
SER 2010.0161
THR 2020.0205
SER 2030.0340
PRO 2040.0245
ILE 2050.0124
VAL 2060.0077
LYS 2070.0079
SER 2080.0090
PHE 2090.0212
ASN 2100.0213
ARG 2110.0212
ASN 2120.0117
GLU 2130.0021
CYS 2140.0163
GLU 10.0562
VAL 20.0165
GLN 30.0375
LEU 40.0152
VAL 50.0123
GLU 60.0068
SER 70.0088
GLY 80.0109
GLY 90.0114
GLY 100.0054
LEU 110.0051
VAL 120.0030
LYS 130.0025
PRO 140.0062
GLY 150.0093
GLY 160.0103
SER 170.0129
LEU 180.0131
LYS 190.0122
LEU 200.0118
SER 210.0110
CYS 220.0080
ALA 230.0108
ALA 240.0154
SER 250.0224
GLY 260.0135
PHE 270.0177
ILE 280.0211
PHE 290.0167
SER 300.0180
ASP 310.0151
TYR 320.0130
TYR 330.0091
MET 340.0051
TYR 350.0065
TRP 360.0084
VAL 370.0089
ARG 380.0088
GLN 390.0120
THR 400.0173
PRO 410.0245
GLU 420.0326
LYS 430.0249
ARG 440.0223
LEU 450.0206
GLU 460.0083
TRP 470.0057
VAL 480.0025
ALA 490.0069
THR 500.0058
ILE 510.0045
SER 520.0065
ASP 520.0086
GLY 530.0109
ASN 540.0098
SER 550.0046
TYR 560.0029
THR 570.0047
TYR 580.0059
TYR 590.0060
VAL 600.0054
ASP 610.0133
SER 620.0136
VAL 630.0084
LYS 640.0097
GLY 650.0111
ARG 660.0123
PHE 670.0105
THR 680.0104
ILE 690.0101
SER 700.0078
ARG 710.0063
ASP 720.0146
ASN 730.0215
ALA 740.0369
LYS 750.0215
ASN 760.0041
ASN 770.0065
LEU 780.0080
TYR 790.0126
LEU 800.0124
GLN 810.0132
MET 820.0142
SER 820.0131
SER 820.0111
LEU 820.0081
LYS 830.0068
SER 840.0063
GLU 850.0097
ASP 860.0055
THR 870.0076
ALA 880.0069
ILE 890.0053
TYR 900.0053
TYR 910.0040
CYS 920.0053
ALA 930.0060
ARG 940.0112
ASP 950.0091
GLY 960.0097
PRO 970.0259
THR 980.0477
ASP 990.0523
SER 1000.0080
SER 1000.0067
GLY 1000.0066
TYR 1000.0065
GLY 1000.0047
GLY 1000.0044
PHE 1000.0037
GLY 1010.0031
TYR 1020.0050
TRP 1030.0074
GLY 1040.0076
GLN 1050.0085
GLY 1060.0034
THR 1070.0041
LEU 1080.0044
VAL 1090.0064
THR 1100.0065
VAL 1110.0050
SER 1120.0034
GLU 1130.0042
ALA 1140.0041
LYS 1150.0065
THR 1160.0069
THR 1170.0023
PRO 1180.0082
PRO 1190.0070
SER 1200.0065
VAL 1210.0026
TYR 1220.0025
PRO 1230.0036
LEU 1240.0017
ALA 1250.0035
PRO 1260.0066
GLY 1270.0018
SER 1280.0303
ALA 1290.0552
ALA 1300.0289
GLN 1330.0418
THR 1340.0294
ASN 1350.0204
SER 1360.0260
MET 1370.0200
VAL 1380.0193
THR 1390.0072
LEU 1400.0077
GLY 1410.0079
CYS 1420.0049
LEU 1430.0051
VAL 1440.0053
LYS 1450.0044
GLY 1460.0037
TYR 1470.0040
PHE 1480.0036
PRO 1490.0048
GLU 1500.0051
PRO 1510.0031
VAL 1520.0036
THR 1530.0046
VAL 1540.0057
THR 1560.0068
TRP 1570.0083
ASN 1620.0109
SER 1630.0110
GLY 1640.0102
SER 1650.0155
LEU 1660.0156
SER 1670.0143
SER 1680.0214
GLY 1690.0159
VAL 1710.0107
HIS 1720.0104
THR 1730.0110
PHE 1740.0146
PRO 1750.0143
ALA 1760.0128
VAL 1770.0160
LEU 1780.0130
GLN 1790.0145
SER 1800.0099
ASP 1830.0053
LEU 1840.0062
TYR 1850.0082
THR 1860.0100
LEU 1870.0100
SER 1880.0103
SER 1890.0117
SER 1900.0106
VAL 1910.0113
THR 1920.0221
VAL 1930.0206
PRO 1940.0151
SER 1950.0083
SER 1960.0441
PRO 1980.0397
ARG 1990.0277
PRO 2000.0207
SER 2020.0294
GLU 2030.0274
THR 2040.0256
VAL 2050.0064
THR 2060.0070
CYS 2080.0062
ASN 2090.0054
VAL 2100.0054
ALA 2110.0067
HIS 2120.0071
PRO 2130.0080
ALA 2140.0081
SER 2150.0126
SER 2160.0157
THR 2170.0101
LYS 2180.0067
VAL 2190.0070
ASP 2200.0041
LYS 2210.0053
LYS 2220.0063
ILE 2230.0053
VAL 2260.0128
PRO 2270.0148
ARG 2280.0149
ASP 2320.0374
CYS 2330.0320

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.