Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* 2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex *

CA strain for 2608162332391822803

--- normal mode 8 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ILE 479 PHE 480 0.0004

PHE 480 ILE 481 -0.0001

ILE 481 SER 482 -0.0117

SER 482 ASP 483 -0.0000

ASP 483 ASP 484 0.0003

ASP 484 LYS 485 -0.0074

LYS 485 ASP 486 0.0003

ASP 486 SER 487 -0.0005

SER 487 LEU 488 0.0003

LEU 488 LYS 489 -0.0000

LYS 489 CYS 490 -0.0002

CYS 490 PRO 491 -0.0110

PRO 491 CYS 492 0.0000

CYS 492 ASP 493 0.0002

ASP 493 PRO 494 -0.0138

PRO 494 GLU 495 -0.0001

GLU 495 MET 496 0.0002

MET 496 VAL 497 -0.0161

VAL 497 SER 498 -0.0001

SER 498 GLN 499 -0.0000

GLN 499 SER 500 0.0133

SER 500 THR 501 0.0001

THR 501 CYS 502 -0.0003

CYS 502 ARG 503 -0.0086

ARG 503 PHE 504 0.0002

PHE 504 PHE 505 0.0003

PHE 505 VAL 506 -0.0094

VAL 506 CYS 507 0.0004

CYS 507 LYS 508 -0.0001

LYS 508 CYS 509 0.0311

CYS 509 VAL 510 0.0002

VAL 510 GLU 511 0.0002

GLU 511 ARG 512 -0.0094

ARG 512 SER 2 -0.0599

SER 2 VAL 3 0.0001

VAL 3 LEU 4 0.0001

LEU 4 SER 5 -0.1009

SER 5 GLN 6 0.0002

GLN 6 SER 7 -0.0003

SER 7 PRO 8 -0.1437

PRO 8 ALA 9 0.0001

ALA 9 ILE 10 0.0004

ILE 10 LEU 11 0.0173

LEU 11 SER 12 -0.0001

SER 12 ALA 13 -0.0001

ALA 13 SER 14 -0.0266

SER 14 PRO 15 0.0001

PRO 15 GLY 16 0.0005

GLY 16 GLU 17 -0.0155

GLU 17 LYS 18 -0.0003

LYS 18 VAL 19 0.0001

VAL 19 THR 20 -0.0775

THR 20 MET 21 -0.0000

MET 21 THR 22 -0.0002

THR 22 CYS 23 -0.0522

CYS 23 ARG 24 0.0000

ARG 24 ALA 25 0.0001

ALA 25 ARG 26 -0.0369

ARG 26 SER 27 -0.0002

SER 27 SER 29 0.0125

SER 29 VAL 30 0.0001

VAL 30 SER 31 -0.0002

SER 31 TYR 32 -0.0054

TYR 32 MET 33 -0.0001

MET 33 HIS 34 -0.0001

HIS 34 TRP 35 0.0095

TRP 35 TYR 36 0.0004

TYR 36 GLN 37 -0.0003

GLN 37 GLN 38 -0.0339

GLN 38 LYS 39 0.0001

LYS 39 SER 40 -0.0001

SER 40 GLY 41 0.0422

GLY 41 SER 42 0.0001

SER 42 SER 43 0.0000

SER 43 PRO 44 0.0036

PRO 44 LYS 45 -0.0001

LYS 45 PRO 46 0.0000

PRO 46 TRP 47 0.0249

TRP 47 ILE 48 -0.0000

ILE 48 HIS 49 -0.0000

HIS 49 ALA 50 0.0074

ALA 50 THR 51 -0.0004

THR 51 SER 52 -0.0001

SER 52 ASN 53 -0.0081

ASN 53 LEU 54 0.0003

LEU 54 ALA 55 0.0002

ALA 55 SER 56 -0.0201

SER 56 GLY 57 -0.0000

GLY 57 VAL 58 0.0001

VAL 58 PRO 59 0.0530

PRO 59 ALA 60 0.0000

ALA 60 ARG 61 -0.0001

ARG 61 PHE 62 0.0081

PHE 62 SER 63 -0.0001

SER 63 GLY 64 0.0002

GLY 64 SER 65 0.0135

SER 65 GLY 66 -0.0000

GLY 66 SER 67 0.0002

SER 67 GLY 68 0.0126

GLY 68 THR 69 0.0002

THR 69 SER 70 -0.0001

SER 70 TYR 71 -0.0143

TYR 71 SER 72 -0.0000

SER 72 LEU 73 -0.0001

LEU 73 THR 74 -0.0040

THR 74 ILE 75 0.0003

ILE 75 SER 76 0.0001

SER 76 ARG 77 -0.0095

ARG 77 VAL 78 -0.0003

VAL 78 GLU 79 0.0001

GLU 79 ALA 80 -0.1010

ALA 80 GLU 81 -0.0000

GLU 81 ASP 82 0.0001

ASP 82 ALA 83 -0.0305

ALA 83 ALA 84 0.0001

ALA 84 THR 85 -0.0000

THR 85 TYR 86 -0.0241

TYR 86 TYR 87 0.0001

TYR 87 CYS 88 -0.0001

CYS 88 GLN 89 -0.0487

GLN 89 GLN 90 0.0001

GLN 90 TRP 91 -0.0001

TRP 91 SER 92 -0.0082

SER 92 SER 93 0.0000

SER 93 HIS 94 -0.0001

HIS 94 PRO 95 0.0175

PRO 95 PRO 96 0.0001

PRO 96 THR 97 -0.0003

THR 97 PHE 98 -0.0769

PHE 98 GLY 99 -0.0001

GLY 99 SER 100 -0.0001

SER 100 GLY 101 -0.0336

GLY 101 THR 102 -0.0005

THR 102 LYS 103 0.0001

LYS 103 LEU 104 -0.0365

LEU 104 GLU 105 -0.0003

GLU 105 ILE 106 0.0003

ILE 106 LYS 107 0.0425

LYS 107 ARG 108 -0.0003

ARG 108 ALA 109 -0.0000

ALA 109 ASP 110 0.0602

ASP 110 ALA 111 0.0002

ALA 111 ALA 112 -0.0003

ALA 112 PRO 113 -0.0331

PRO 113 THR 114 -0.0000

THR 114 VAL 115 -0.0003

VAL 115 SER 116 -0.0498

SER 116 ILE 117 0.0001

ILE 117 PHE 118 -0.0003

PHE 118 PRO 119 -0.0260

PRO 119 PRO 120 -0.0002

PRO 120 SER 121 -0.0003

SER 121 SER 122 0.0029

SER 122 GLU 123 -0.0002

GLU 123 GLN 124 -0.0001

GLN 124 LEU 125 -0.0090

LEU 125 THR 126 -0.0001

THR 126 SER 127 0.0002

SER 127 GLY 128 0.0035

GLY 128 GLY 129 -0.0004

GLY 129 ALA 130 0.0002

ALA 130 SER 131 0.0025

SER 131 VAL 132 0.0003

VAL 132 VAL 133 0.0002

VAL 133 CYS 134 -0.0205

CYS 134 PHE 135 0.0001

PHE 135 LEU 136 0.0000

LEU 136 ASN 137 -0.0407

ASN 137 ASN 138 0.0000

ASN 138 PHE 139 0.0001

PHE 139 TYR 140 -0.0468

TYR 140 PRO 141 -0.0001

PRO 141 LYS 142 -0.0000

LYS 142 ASP 143 0.0673

ASP 143 ILE 144 -0.0002

ILE 144 ASN 145 -0.0000

ASN 145 VAL 146 0.1358

VAL 146 LYS 147 0.0002

LYS 147 TRP 148 -0.0000

TRP 148 LYS 149 0.0146

LYS 149 ILE 150 0.0000

ILE 150 ASP 151 -0.0002

ASP 151 GLY 152 -0.0035

GLY 152 SER 153 -0.0001

SER 153 GLU 154 -0.0003

GLU 154 ARG 155 -0.0057

ARG 155 GLN 156 -0.0002

GLN 156 ASN 157 0.0001

ASN 157 GLY 158 -0.1013

GLY 158 VAL 159 -0.0000

VAL 159 LEU 160 -0.0001

LEU 160 ASN 161 0.0289

ASN 161 SER 162 -0.0001

SER 162 TRP 163 -0.0000

TRP 163 THR 164 -0.0339

THR 164 ASP 165 0.0000

ASP 165 GLN 166 0.0000

GLN 166 ASP 167 -0.0311

ASP 167 SER 168 -0.0004

SER 168 LYS 169 -0.0006

LYS 169 ASP 170 0.0645

ASP 170 SER 171 0.0005

SER 171 THR 172 0.0000

THR 172 TYR 173 0.0122

TYR 173 SER 174 -0.0001

SER 174 MET 175 0.0001

MET 175 SER 176 0.0002

SER 176 SER 177 0.0001

SER 177 THR 178 -0.0000

THR 178 LEU 179 0.0041

LEU 179 THR 180 -0.0002

THR 180 LEU 181 -0.0000

LEU 181 THR 182 0.0331

THR 182 LYS 183 -0.0001

LYS 183 ASP 184 0.0002

ASP 184 GLU 185 0.0051

GLU 185 TYR 186 0.0002

TYR 186 GLU 187 -0.0002

GLU 187 ARG 188 -0.0027

ARG 188 HIS 189 -0.0003

HIS 189 ASN 190 0.0001

ASN 190 SER 191 0.0027

SER 191 TYR 192 -0.0001

TYR 192 THR 193 0.0000

THR 193 CYS 194 0.0235

CYS 194 GLU 195 0.0001

GLU 195 ALA 196 0.0001

ALA 196 THR 197 0.0417

THR 197 HIS 198 0.0000

HIS 198 LYS 199 0.0002

LYS 199 THR 200 -0.0306

THR 200 SER 201 -0.0000

SER 201 THR 202 -0.0001

THR 202 SER 203 0.0194

SER 203 PRO 204 0.0005

PRO 204 ILE 205 -0.0003

ILE 205 VAL 206 0.0189

VAL 206 LYS 207 0.0001

LYS 207 SER 208 -0.0003

SER 208 PHE 209 0.0069

PHE 209 ASN 210 0.0001

ASN 210 ARG 211 -0.0000

ARG 211 ASN 212 -0.0075

ASN 212 GLU 213 -0.0001

GLU 213 CYS 214 -0.0001

CYS 214 GLU 1 0.0113

GLU 1 VAL 2 0.0002

VAL 2 GLN 3 0.0002

GLN 3 LEU 4 -0.0241

LEU 4 VAL 5 -0.0004

VAL 5 GLU 6 0.0002

GLU 6 SER 7 -0.0677

SER 7 GLY 8 0.0001

GLY 8 GLY 9 -0.0000

GLY 9 GLY 10 -0.3027

GLY 10 LEU 11 0.0001

LEU 11 VAL 12 -0.0000

VAL 12 LYS 13 -0.0272

LYS 13 PRO 14 -0.0002

PRO 14 GLY 15 -0.0001

GLY 15 GLY 16 -0.0258

GLY 16 SER 17 -0.0002

SER 17 LEU 18 0.0000

LEU 18 LYS 19 -0.1032

LYS 19 LEU 20 -0.0000

LEU 20 SER 21 0.0001

SER 21 CYS 22 -0.0214

CYS 22 ALA 23 -0.0003

ALA 23 ALA 24 -0.0001

ALA 24 SER 25 -0.0229

SER 25 GLY 26 0.0001

GLY 26 PHE 27 -0.0001

PHE 27 ILE 28 0.0033

ILE 28 PHE 29 -0.0002

PHE 29 SER 30 -0.0000

SER 30 ASP 31 -0.0125

ASP 31 TYR 32 0.0002

TYR 32 TYR 33 -0.0003

TYR 33 MET 34 -0.0239

MET 34 TYR 35 -0.0001

TYR 35 TRP 36 -0.0000

TRP 36 VAL 37 0.0079

VAL 37 ARG 38 -0.0003

ARG 38 GLN 39 0.0000

GLN 39 THR 40 -0.0173

THR 40 PRO 41 -0.0005

PRO 41 GLU 42 0.0001

GLU 42 LYS 43 -0.0133

LYS 43 ARG 44 -0.0000

ARG 44 LEU 45 -0.0002

LEU 45 GLU 46 -0.0586

GLU 46 TRP 47 -0.0001

TRP 47 VAL 48 0.0004

VAL 48 ALA 49 -0.0328

ALA 49 THR 50 0.0003

THR 50 ILE 51 -0.0003

ILE 51 SER 52 -0.0142

SER 52 ASP 52 0.0002

ASP 52 GLY 53 -0.0004

GLY 53 ASN 54 -0.0002

ASN 54 SER 55 -0.0198

SER 55 TYR 56 0.0002

TYR 56 THR 57 0.0002

THR 57 TYR 58 -0.0163

TYR 58 TYR 59 0.0001

TYR 59 VAL 60 0.0001

VAL 60 ASP 61 -0.0005

ASP 61 SER 62 0.0001

SER 62 VAL 63 -0.0003

VAL 63 LYS 64 -0.0265

LYS 64 GLY 65 -0.0000

GLY 65 ARG 66 -0.0002

ARG 66 PHE 67 0.0066

PHE 67 THR 68 0.0004

THR 68 ILE 69 -0.0001

ILE 69 SER 70 0.0024

SER 70 ARG 71 0.0004

ARG 71 ASP 72 0.0000

ASP 72 ASN 73 -0.0044

ASN 73 ALA 74 -0.0000

ALA 74 LYS 75 0.0004

LYS 75 ASN 76 0.0125

ASN 76 ASN 77 0.0002

ASN 77 LEU 78 0.0001

LEU 78 TYR 79 -0.0175

TYR 79 LEU 80 -0.0000

LEU 80 GLN 81 -0.0000

GLN 81 MET 82 -0.0188

MET 82 SER 82 -0.0002

SER 82 SER 82 0.0001

SER 82 LEU 82 -0.0000

LEU 82 LYS 83 0.0001

LYS 83 SER 84 -0.0001

SER 84 GLU 85 0.0641

GLU 85 ASP 86 -0.0002

ASP 86 THR 87 -0.0001

THR 87 ALA 88 -0.0171

ALA 88 ILE 89 -0.0002

ILE 89 TYR 90 -0.0000

TYR 90 TYR 91 -0.0316

TYR 91 CYS 92 -0.0001

CYS 92 ALA 93 -0.0002

ALA 93 ARG 94 -0.0331

ARG 94 ASP 95 -0.0002

ASP 95 GLY 96 0.0002

GLY 96 PRO 97 -0.0131

PRO 97 THR 98 0.0004

THR 98 ASP 99 -0.0001

ASP 99 SER 100 -0.0160

SER 100 SER 100 -0.0001

SER 100 GLY 100 -0.0002

GLY 100 TYR 100 0.0000

TYR 100 GLY 100 0.0000

GLY 100 GLY 100 0.0000

GLY 100 PHE 100 -0.0004

PHE 100 GLY 101 0.0004

GLY 101 TYR 102 0.0000

TYR 102 TRP 103 -0.0887

TRP 103 GLY 104 -0.0004

GLY 104 GLN 105 0.0001

GLN 105 GLY 106 -0.0741

GLY 106 THR 107 -0.0000

THR 107 LEU 108 -0.0001

LEU 108 VAL 109 -0.0295

VAL 109 THR 110 0.0003

THR 110 VAL 111 -0.0000

VAL 111 SER 112 0.0458

SER 112 GLU 113 -0.0004

GLU 113 ALA 114 0.0000

ALA 114 LYS 115 0.0965

LYS 115 THR 116 -0.0003

THR 116 THR 117 0.0002

THR 117 PRO 118 0.0726

PRO 118 PRO 119 0.0002

PRO 119 SER 120 -0.0001

SER 120 VAL 121 0.0222

VAL 121 TYR 122 0.0001

TYR 122 PRO 123 -0.0002

PRO 123 LEU 124 0.0191

LEU 124 ALA 125 0.0004

ALA 125 PRO 126 -0.0003

PRO 126 GLY 127 0.0106

GLY 127 SER 128 -0.0001

SER 128 ALA 129 -0.0002

ALA 129 ALA 130 -0.0231

ALA 130 GLN 133 -0.0026

GLN 133 THR 134 0.0002

THR 134 ASN 135 0.0003

ASN 135 SER 136 -0.0039

SER 136 MET 137 0.0000

MET 137 VAL 138 -0.0002

VAL 138 THR 139 -0.0083

THR 139 LEU 140 -0.0001

LEU 140 GLY 141 -0.0001

GLY 141 CYS 142 0.0146

CYS 142 LEU 143 0.0005

LEU 143 VAL 144 -0.0004

VAL 144 LYS 145 -0.0034

LYS 145 GLY 146 0.0003

GLY 146 TYR 147 0.0003

TYR 147 PHE 148 -0.0625

PHE 148 PRO 149 -0.0003

PRO 149 GLU 150 0.0003

GLU 150 PRO 151 0.0759

PRO 151 VAL 152 -0.0003

VAL 152 THR 153 0.0001

THR 153 VAL 154 0.0654

VAL 154 THR 156 0.0287

THR 156 TRP 157 0.0001

TRP 157 ASN 162 -0.0084

ASN 162 SER 163 0.0001

SER 163 GLY 164 -0.0000

GLY 164 SER 165 0.0263

SER 165 LEU 166 -0.0002

LEU 166 SER 167 -0.0001

SER 167 SER 168 0.0015

SER 168 GLY 169 -0.0001

GLY 169 VAL 171 0.0494

VAL 171 HIS 172 0.0003

HIS 172 THR 173 -0.0000

THR 173 PHE 174 0.0177

PHE 174 PRO 175 0.0001

PRO 175 ALA 176 -0.0003

ALA 176 VAL 177 0.0084

VAL 177 LEU 178 -0.0001

LEU 178 GLN 179 -0.0000

GLN 179 SER 180 -0.0287

SER 180 ASP 183 -0.0936

ASP 183 LEU 184 -0.0003

LEU 184 TYR 185 0.0000

TYR 185 THR 186 -0.0761

THR 186 LEU 187 -0.0004

LEU 187 SER 188 0.0005

SER 188 SER 189 -0.0087

SER 189 SER 190 0.0000

SER 190 VAL 191 0.0000

VAL 191 THR 192 0.0067

THR 192 VAL 193 0.0001

VAL 193 PRO 194 -0.0002

PRO 194 SER 195 0.0064

SER 195 SER 196 -0.0000

SER 196 PRO 198 0.0139

PRO 198 ARG 199 0.0001

ARG 199 PRO 200 -0.0001

PRO 200 SER 202 -0.0010

SER 202 GLU 203 0.0001

GLU 203 THR 204 0.0001

THR 204 VAL 205 -0.0086

VAL 205 THR 206 0.0001

THR 206 CYS 208 0.0335

CYS 208 ASN 209 -0.0001

ASN 209 VAL 210 0.0002

VAL 210 ALA 211 0.0655

ALA 211 HIS 212 -0.0001

HIS 212 PRO 213 0.0001

PRO 213 ALA 214 0.0940

ALA 214 SER 215 0.0002

SER 215 SER 216 -0.0002

SER 216 THR 217 0.0605

THR 217 LYS 218 -0.0002

LYS 218 VAL 219 -0.0001

VAL 219 ASP 220 0.0765

ASP 220 LYS 221 -0.0000

LYS 221 LYS 222 0.0001

LYS 222 ILE 223 0.0237

ILE 223 VAL 226 0.0016

VAL 226 PRO 227 -0.0001

PRO 227 ARG 228 0.0001

ARG 228 ASP 232 0.0005

ASP 232 CYS 233 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** 2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex ***

CA strain for 2608162332391822803

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* 2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex *